| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is 108757991
Identifier: 108757991
GI number: 108757991
Start: 2955794
End: 2957815
Strand: Direct
Name: 108757991
Synonym: MXAN_2541
Alternate gene names: NA
Gene position: 2955794-2957815 (Clockwise)
Preceding gene: 108763772
Following gene: 108757274
Centisome position: 32.34
GC content: 65.73
Gene sequence:
>2022_bases ATGCGCTCCTTCCGGCTCATCCGCGTCGCCGTCCTCGGGCTGTCGCTCGCGTGGACGGCCCCCACCTACGCGCAGAACTT CGAGGGCCTGGACCTCTCCGGCCAGTCCAAGAAGAAGAAGCGCACCACTCCCAAGAAGAAGCCCACCCGCAAGAGCCGCG CCGACAAGGCGAAGCCCGCGCCGGCGCAGGATGACGACGCGGACGACGATGCCGCCGCTGCTTCCTCCAGCGAGGCGCCC ACGAGCGTGTCTCCCGCGGAGACGGCACCCGCGGCGGCCCCTTCCACGCCCGCGCCCACCCCGGCTTCGCCTCCCGCGAA CACCGGGAGCATGGGCATGGGCCTGGACCTGACGCAGGAGGCGCCCAAGCCGGCCGCGCCCACCATGTCCTTCGACGCGG TGGACGTCTCCGGCAAGACGGCGGACCGCCAGCGCCTGGACGTGGCCGTCAGCCTCTTCAAGAACGACGAGTACGAAAAG GCCTCCATGGCGGCGCACGAGCTGCTGGAGGATCCGAAGCTGGCGGGCCTGCACACCGAGGCGCGCTACGTGCTGGCCAA GTCGCTCTACCGCATGGGCATGTACCACTCGTCCCTGGGCGAGTTCTCCAAGATCCTCTCCCTGGGCCCGTCCACCAAGT TCTTCAAGACGAGCCTGGAGTGGCTCTTCTTCATCAGCCGCAAGACGAAGAACGAGACGGTCATCCTCGACGAGATTGCC CGTCACGCGAACCAGGAGTTCCCCGAGAAGTACCGCAACGAGTTCCGCTACCTGCTGGCGCGCTACCACTTCGTGCGTGG CCGCGCGCTGGACCAGGTGGGGCAGCCCGAGGAAGCCGACAAGAGCTTCTCGGAAGTGAAGCGGCTGGCGCTGACCATTC CGCGCACCGACCCGTTCTTCCCTCGCGCCAAGTACCTGGAGGGCCTGTCCTTCTTCCGTAACGGCAGCCGTCAGAAGGAC GCGGCGGCCAAGCGCGCCAACGGGGAGATGCTGGCCGCCATCGAGGCGATGAAGGAAGTCGTCCGCCTCACGCGTCCGGC GCCGGGCAAGACGGCGGACCAGGCGAAGCTGGACAAGTCGCTGCGTGAGCTGGCCTTCATGCAGCTGGCCCGCACGCACT ACGGCATGCAGCAGAACCGCTTCGCGCTCTTCTACCTGGGCAAGGTCGAGCGCGGAAACACCCAGTGGCTGGAGGCCCTC TTCGAGTCCAGCTGGGCCAACTACCGCGTGGGCCAGTACGAGCAGGCGCTGGGCAGCCTCATCACCCTGTCGTCGCCCTT CTTCCGCGAGGAGTACTTCCCGGAGGCGCTCATCCTGAAGGCGGTCATCTACTACGAGAACTGCCGCTACCGGGAGTCCA ACATCATCCTCCAGGACTTCGAGCGCACCTACCTGCCCGTGCACGACCAGTTGGAGGCGCTGGTGAAGAAGAACATGGAG GCCAGCGAGTACTACTCGGTGCTGTCCGACGTGCAGAAGAAGAACAAGGACGGCCTGGAGAAGAACGAGACGGACATCAT CCTGGAGCGCATCCTCCGGCTGGCCCTGACGGACCAGGACCTGCGCAAGACGAACGACTCCATCCTCGAGCTGGAGGCGG AGATGGATGCCTTCGCGAACCGGGCGGACACCTTCAAGTACTCCGAGCTGAGCAAGTCCCTGCTGGAGGGGCTCAAGGTG CAGCGCACGGCGCTCATCTCCAAGGCCGGCATCATGGCCAAGGGCAAGCTGGAGACGGAGCTGGTGGCGCTCAAACAGCT CCTGGCCAACGGCCTGCGCATCAAGTTCGAGACGACCACCAAGGAGAAGGAGTTCCTGGAGGAGCAGCTCAAGGCGGGCG GCCGCACGGCCATCGTCAAGAAGTACAAGTACTCCGTCGCCGTGCAGGACGACCAGCTCTACTGGCCGTACGAGGGCGAG TACTGGCGTGACGAGCTGGGCACCTACCAGTACACGATGACCAAGGGCTGCATCGAGCGCGACACCGCGAACCGGAAAGT CCAGTCCGCCGAGGCGATGTAA
Upstream 100 bases:
>100_bases TCATCTACGTGGAGAAGGGCACCGAGGTCTCTGGCAACTACCTGCGCAACCAGCTCCTGTTCGAGCTGGGTGTCTCCTTC TTCTTCGGGTCCGAGTCATG
Downstream 100 bases:
>100_bases AGCCCTTCGGACCCGGGACTTCTCCCCCATTCGAGCCGCCGGGGCGCTATCTTCGCGCTCCGGCGGTTTTTCTTTTTTCA GCAAAGGGGCAACTGGTGGT
Product: TPR repeat-containing protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 673; Mature: 673
Protein sequence:
>673_residues MRSFRLIRVAVLGLSLAWTAPTYAQNFEGLDLSGQSKKKKRTTPKKKPTRKSRADKAKPAPAQDDDADDDAAAASSSEAP TSVSPAETAPAAAPSTPAPTPASPPANTGSMGMGLDLTQEAPKPAAPTMSFDAVDVSGKTADRQRLDVAVSLFKNDEYEK ASMAAHELLEDPKLAGLHTEARYVLAKSLYRMGMYHSSLGEFSKILSLGPSTKFFKTSLEWLFFISRKTKNETVILDEIA RHANQEFPEKYRNEFRYLLARYHFVRGRALDQVGQPEEADKSFSEVKRLALTIPRTDPFFPRAKYLEGLSFFRNGSRQKD AAAKRANGEMLAAIEAMKEVVRLTRPAPGKTADQAKLDKSLRELAFMQLARTHYGMQQNRFALFYLGKVERGNTQWLEAL FESSWANYRVGQYEQALGSLITLSSPFFREEYFPEALILKAVIYYENCRYRESNIILQDFERTYLPVHDQLEALVKKNME ASEYYSVLSDVQKKNKDGLEKNETDIILERILRLALTDQDLRKTNDSILELEAEMDAFANRADTFKYSELSKSLLEGLKV QRTALISKAGIMAKGKLETELVALKQLLANGLRIKFETTTKEKEFLEEQLKAGGRTAIVKKYKYSVAVQDDQLYWPYEGE YWRDELGTYQYTMTKGCIERDTANRKVQSAEAM
Sequences:
>Translated_673_residues MRSFRLIRVAVLGLSLAWTAPTYAQNFEGLDLSGQSKKKKRTTPKKKPTRKSRADKAKPAPAQDDDADDDAAAASSSEAP TSVSPAETAPAAAPSTPAPTPASPPANTGSMGMGLDLTQEAPKPAAPTMSFDAVDVSGKTADRQRLDVAVSLFKNDEYEK ASMAAHELLEDPKLAGLHTEARYVLAKSLYRMGMYHSSLGEFSKILSLGPSTKFFKTSLEWLFFISRKTKNETVILDEIA RHANQEFPEKYRNEFRYLLARYHFVRGRALDQVGQPEEADKSFSEVKRLALTIPRTDPFFPRAKYLEGLSFFRNGSRQKD AAAKRANGEMLAAIEAMKEVVRLTRPAPGKTADQAKLDKSLRELAFMQLARTHYGMQQNRFALFYLGKVERGNTQWLEAL FESSWANYRVGQYEQALGSLITLSSPFFREEYFPEALILKAVIYYENCRYRESNIILQDFERTYLPVHDQLEALVKKNME ASEYYSVLSDVQKKNKDGLEKNETDIILERILRLALTDQDLRKTNDSILELEAEMDAFANRADTFKYSELSKSLLEGLKV QRTALISKAGIMAKGKLETELVALKQLLANGLRIKFETTTKEKEFLEEQLKAGGRTAIVKKYKYSVAVQDDQLYWPYEGE YWRDELGTYQYTMTKGCIERDTANRKVQSAEAM >Mature_673_residues MRSFRLIRVAVLGLSLAWTAPTYAQNFEGLDLSGQSKKKKRTTPKKKPTRKSRADKAKPAPAQDDDADDDAAAASSSEAP TSVSPAETAPAAAPSTPAPTPASPPANTGSMGMGLDLTQEAPKPAAPTMSFDAVDVSGKTADRQRLDVAVSLFKNDEYEK ASMAAHELLEDPKLAGLHTEARYVLAKSLYRMGMYHSSLGEFSKILSLGPSTKFFKTSLEWLFFISRKTKNETVILDEIA RHANQEFPEKYRNEFRYLLARYHFVRGRALDQVGQPEEADKSFSEVKRLALTIPRTDPFFPRAKYLEGLSFFRNGSRQKD AAAKRANGEMLAAIEAMKEVVRLTRPAPGKTADQAKLDKSLRELAFMQLARTHYGMQQNRFALFYLGKVERGNTQWLEAL FESSWANYRVGQYEQALGSLITLSSPFFREEYFPEALILKAVIYYENCRYRESNIILQDFERTYLPVHDQLEALVKKNME ASEYYSVLSDVQKKNKDGLEKNETDIILERILRLALTDQDLRKTNDSILELEAEMDAFANRADTFKYSELSKSLLEGLKV QRTALISKAGIMAKGKLETELVALKQLLANGLRIKFETTTKEKEFLEEQLKAGGRTAIVKKYKYSVAVQDDQLYWPYEGE YWRDELGTYQYTMTKGCIERDTANRKVQSAEAM
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 75995; Mature: 75995
Theoretical pI: Translated: 9.20; Mature: 9.20
Prosite motif: PS50293 TPR_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRSFRLIRVAVLGLSLAWTAPTYAQNFEGLDLSGQSKKKKRTTPKKKPTRKSRADKAKPA CCCHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCCHHHCCCCCCCCCHHHHCCCCCCC PAQDDDADDDAAAASSSEAPTSVSPAETAPAAAPSTPAPTPASPPANTGSMGMGLDLTQE CCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC APKPAAPTMSFDAVDVSGKTADRQRLDVAVSLFKNDEYEKASMAAHELLEDPKLAGLHTE CCCCCCCCCCCCCEECCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCHH ARYVLAKSLYRMGMYHSSLGEFSKILSLGPSTKFFKTSLEWLFFISRKTKNETVILDEIA HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCEEEHHHHH RHANQEFPEKYRNEFRYLLARYHFVRGRALDQVGQPEEADKSFSEVKRLALTIPRTDPFF HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCC PRAKYLEGLSFFRNGSRQKDAAAKRANGEMLAAIEAMKEVVRLTRPAPGKTADQAKLDKS CHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH LRELAFMQLARTHYGMQQNRFALFYLGKVERGNTQWLEALFESSWANYRVGQYEQALGSL HHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHH ITLSSPFFREEYFPEALILKAVIYYENCRYRESNIILQDFERTYLPVHDQLEALVKKNME HHCCCCHHHHHHCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHCCCC ASEYYSVLSDVQKKNKDGLEKNETDIILERILRLALTDQDLRKTNDSILELEAEMDAFAN HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCHHHHHCCCHHEEHHHHHHHHHH RADTFKYSELSKSLLEGLKVQRTALISKAGIMAKGKLETELVALKQLLANGLRIKFETTT HHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCC KEKEFLEEQLKAGGRTAIVKKYKYSVAVQDDQLYWPYEGEYWRDELGTYQYTMTKGCIER HHHHHHHHHHHCCCCEEEEEEEEEEEEEECCEEECCCCCCHHHHHCCCEEEEHHHHHHHH DTANRKVQSAEAM HHHHHHHHHHCCC >Mature Secondary Structure MRSFRLIRVAVLGLSLAWTAPTYAQNFEGLDLSGQSKKKKRTTPKKKPTRKSRADKAKPA CCCHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCCHHHCCCCCCCCCHHHHCCCCCCC PAQDDDADDDAAAASSSEAPTSVSPAETAPAAAPSTPAPTPASPPANTGSMGMGLDLTQE CCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC APKPAAPTMSFDAVDVSGKTADRQRLDVAVSLFKNDEYEKASMAAHELLEDPKLAGLHTE CCCCCCCCCCCCCEECCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCHH ARYVLAKSLYRMGMYHSSLGEFSKILSLGPSTKFFKTSLEWLFFISRKTKNETVILDEIA HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCEEEHHHHH RHANQEFPEKYRNEFRYLLARYHFVRGRALDQVGQPEEADKSFSEVKRLALTIPRTDPFF HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCC PRAKYLEGLSFFRNGSRQKDAAAKRANGEMLAAIEAMKEVVRLTRPAPGKTADQAKLDKS CHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH LRELAFMQLARTHYGMQQNRFALFYLGKVERGNTQWLEALFESSWANYRVGQYEQALGSL HHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHH ITLSSPFFREEYFPEALILKAVIYYENCRYRESNIILQDFERTYLPVHDQLEALVKKNME HHCCCCHHHHHHCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHCCCC ASEYYSVLSDVQKKNKDGLEKNETDIILERILRLALTDQDLRKTNDSILELEAEMDAFAN HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCHHHHHCCCHHEEHHHHHHHHHH RADTFKYSELSKSLLEGLKVQRTALISKAGIMAKGKLETELVALKQLLANGLRIKFETTT HHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCC KEKEFLEEQLKAGGRTAIVKKYKYSVAVQDDQLYWPYEGEYWRDELGTYQYTMTKGCIER HHHHHHHHHHHCCCCEEEEEEEEEEEEEECCEEECCCCCCHHHHHCCCEEEEHHHHHHHH DTANRKVQSAEAM HHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA