| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is 108757983
Identifier: 108757983
GI number: 108757983
Start: 6725666
End: 6726985
Strand: Direct
Name: 108757983
Synonym: MXAN_5405
Alternate gene names: NA
Gene position: 6725666-6726985 (Clockwise)
Preceding gene: 108757234
Following gene: 108757661
Centisome position: 73.59
GC content: 68.26
Gene sequence:
>1320_bases GTGCCGCCCGTCCGGATCGCTCCGTGCTATAGGCCGCACCGCTCGGCGGTACGCACCCGAGGGGGAAAACAGAGGATGTC TGAGCGGCACATTGAGATGTTCTGGCGTTGTTCGAGCTGCAGCCACCGCAACCTCGGCCGCTACATGGTGTGCCAGGGCT GCAAGAACGCCAAGGACGGCAGCGAGCAGTATGAGATGCCGGAGGACACCGCGTCCGCCGTCACGGTGACCGACGAGGCC CTGCTGAGGATGGCCACCGCCGGTCCCAACTGGCGATGCGCCTATTGCGAGAGCGACCAGCGGGCCCTGGACGGCGGCTG CAAGCACTGCGGCGCGTCCGCCGTCGAAGGCTCGATTCCCGCCGAGCCCACGCGCCCCACGCCAGACGAGAAGAAGGGGG CGAAGAGCAACAGGCGCCTGGGCTGCTACATCCTCTCCATCATCGCGTTCTTCGGCTGCTGCTGTCCCATGTGGATGTCC TCCGGCAAGAAGGGGACCGCCCCCGCGACGGCGGCCACGACAGCGCCCAAGACGGAGCCGGAGAGGACGCGGACGCTCCA GGTCAAGGAGGTCTCCTGGGAGCACACGGTGAGCGTGGAGCGCTACCGCCTGGTGAATGACGAGGGCTTCGAGGAGGACC GGCCAGAAGGCGCCCTCCTGGTGAAGGCGCATGGCAAGCGCCACCACCATGACGACCAGGTGCTCGCCGGCTACACGACC GTCCGCTACACGGAGCGCGTCCAGCGGGGCTTCACCACGGAGACCTACCGCGCCAAGGAGGCTTGCGGTGAGGACTGCAC CACGACGCCCAAGAAGTGCAGCGAGCAGTGCACCAGCAACAGGAACGGCTTCGCGACCTGCAAGACGACCTGCACCGGAG GAGGTCGGAGCTGCACCACCCGCTACTGCTCCGTGACGAAGAAGCGCCAGGAGCCGCGCTACGTGGACGAGCAGCGCTCA CGCCAGGAGCCGCGCTACCGGAGCGTGCCGCGCCAGGCGACCTGGTACACCTGGAAGGAGTGGCGATGGATGCACGACCG GGACGTGAAGGCGAACGGCACCACGCTCGAGGCGCGCTGGCCCACCGACGCCGAGCTGCGGCCCGCCAAGGCCTTGGGCA AGGGCGAGAAGGAACGAAACGCGCGCGACGCGCGGTACAGCGTGGTCTTCCACGGCGACGACCAGCCCGCCATCACCTAC ACCCCTGAAACACTCGAGGAGTTCCAGCGCTTCGCGCCCGGCAGCACGCACACCCTTCAGCAGGAGCAGGGCAAGGTCTC CGTCGTGCCCCAGACGCCCCCGGCGCAGGCCACCCCATAA
Upstream 100 bases:
>100_bases CCTCGCGTCGATTCGTCTCAATACTTCTCTGCACGCGGTTCTTCTCCCTGGCTGTCACCCCACGCACTCCGAGCGACGCG GGAGCGGCACGGGCTTCGCC
Downstream 100 bases:
>100_bases CCTGCGTGCCGCTCTCAAACGCGAAGTGAAATCGCGGGCCACTCCATGTCGGAACGGCTCGAAGGCGCTCCGGTTGACCG CGCGTGCTCCTGTTTCCTAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 439; Mature: 438
Protein sequence:
>439_residues MPPVRIAPCYRPHRSAVRTRGGKQRMSERHIEMFWRCSSCSHRNLGRYMVCQGCKNAKDGSEQYEMPEDTASAVTVTDEA LLRMATAGPNWRCAYCESDQRALDGGCKHCGASAVEGSIPAEPTRPTPDEKKGAKSNRRLGCYILSIIAFFGCCCPMWMS SGKKGTAPATAATTAPKTEPERTRTLQVKEVSWEHTVSVERYRLVNDEGFEEDRPEGALLVKAHGKRHHHDDQVLAGYTT VRYTERVQRGFTTETYRAKEACGEDCTTTPKKCSEQCTSNRNGFATCKTTCTGGGRSCTTRYCSVTKKRQEPRYVDEQRS RQEPRYRSVPRQATWYTWKEWRWMHDRDVKANGTTLEARWPTDAELRPAKALGKGEKERNARDARYSVVFHGDDQPAITY TPETLEEFQRFAPGSTHTLQQEQGKVSVVPQTPPAQATP
Sequences:
>Translated_439_residues MPPVRIAPCYRPHRSAVRTRGGKQRMSERHIEMFWRCSSCSHRNLGRYMVCQGCKNAKDGSEQYEMPEDTASAVTVTDEA LLRMATAGPNWRCAYCESDQRALDGGCKHCGASAVEGSIPAEPTRPTPDEKKGAKSNRRLGCYILSIIAFFGCCCPMWMS SGKKGTAPATAATTAPKTEPERTRTLQVKEVSWEHTVSVERYRLVNDEGFEEDRPEGALLVKAHGKRHHHDDQVLAGYTT VRYTERVQRGFTTETYRAKEACGEDCTTTPKKCSEQCTSNRNGFATCKTTCTGGGRSCTTRYCSVTKKRQEPRYVDEQRS RQEPRYRSVPRQATWYTWKEWRWMHDRDVKANGTTLEARWPTDAELRPAKALGKGEKERNARDARYSVVFHGDDQPAITY TPETLEEFQRFAPGSTHTLQQEQGKVSVVPQTPPAQATP >Mature_438_residues PPVRIAPCYRPHRSAVRTRGGKQRMSERHIEMFWRCSSCSHRNLGRYMVCQGCKNAKDGSEQYEMPEDTASAVTVTDEAL LRMATAGPNWRCAYCESDQRALDGGCKHCGASAVEGSIPAEPTRPTPDEKKGAKSNRRLGCYILSIIAFFGCCCPMWMSS GKKGTAPATAATTAPKTEPERTRTLQVKEVSWEHTVSVERYRLVNDEGFEEDRPEGALLVKAHGKRHHHDDQVLAGYTTV RYTERVQRGFTTETYRAKEACGEDCTTTPKKCSEQCTSNRNGFATCKTTCTGGGRSCTTRYCSVTKKRQEPRYVDEQRSR QEPRYRSVPRQATWYTWKEWRWMHDRDVKANGTTLEARWPTDAELRPAKALGKGEKERNARDARYSVVFHGDDQPAITYT PETLEEFQRFAPGSTHTLQQEQGKVSVVPQTPPAQATP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49513; Mature: 49382
Theoretical pI: Translated: 8.76; Mature: 8.76
Prosite motif: PS01358 ZF_RANBP2_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.8 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 6.8 %Cys+Met (Translated Protein) 4.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 6.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPPVRIAPCYRPHRSAVRTRGGKQRMSERHIEMFWRCSSCSHRNLGRYMVCQGCKNAKDG CCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHEECCCCCCCCCCHHHHHCCCCCCCC SEQYEMPEDTASAVTVTDEALLRMATAGPNWRCAYCESDQRALDGGCKHCGASAVEGSIP CHHCCCCCCCCCEEEEEHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHCCCHHHCCCCC AEPTRPTPDEKKGAKSNRRLGCYILSIIAFFGCCCPMWMSSGKKGTAPATAATTAPKTEP CCCCCCCCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC ERTRTLQVKEVSWEHTVSVERYRLVNDEGFEEDRPEGALLVKAHGKRHHHDDQVLAGYTT CHHEEEEEEECCCCCEECHHHEEECCCCCCCCCCCCCEEEEEECCCCCCCCCCEEECHHH VRYTERVQRGFTTETYRAKEACGEDCTTTPKKCSEQCTSNRNGFATCKTTCTGGGRSCTT HHHHHHHHHCCCCHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCEEEEEEEECCCCCHHHH RYCSVTKKRQEPRYVDEQRSRQEPRYRSVPRQATWYTWKEWRWMHDRDVKANGTTLEARW HHHHHHHHCCCCCHHHHHHHHCCCHHHCCCCCCCEEEHHHEEEECCCCCCCCCCEEEEEC PTDAELRPAKALGKGEKERNARDARYSVVFHGDDQPAITYTPETLEEFQRFAPGSTHTLQ CCCCCCCCHHHHCCCCHHCCCCCCEEEEEEECCCCCCEEECHHHHHHHHHHCCCCCCCHH QEQGKVSVVPQTPPAQATP HCCCCEEEECCCCCCCCCC >Mature Secondary Structure PPVRIAPCYRPHRSAVRTRGGKQRMSERHIEMFWRCSSCSHRNLGRYMVCQGCKNAKDG CCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHEECCCCCCCCCCHHHHHCCCCCCCC SEQYEMPEDTASAVTVTDEALLRMATAGPNWRCAYCESDQRALDGGCKHCGASAVEGSIP CHHCCCCCCCCCEEEEEHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHCCCHHHCCCCC AEPTRPTPDEKKGAKSNRRLGCYILSIIAFFGCCCPMWMSSGKKGTAPATAATTAPKTEP CCCCCCCCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC ERTRTLQVKEVSWEHTVSVERYRLVNDEGFEEDRPEGALLVKAHGKRHHHDDQVLAGYTT CHHEEEEEEECCCCCEECHHHEEECCCCCCCCCCCCCEEEEEECCCCCCCCCCEEECHHH VRYTERVQRGFTTETYRAKEACGEDCTTTPKKCSEQCTSNRNGFATCKTTCTGGGRSCTT HHHHHHHHHCCCCHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCEEEEEEEECCCCCHHHH RYCSVTKKRQEPRYVDEQRSRQEPRYRSVPRQATWYTWKEWRWMHDRDVKANGTTLEARW HHHHHHHHCCCCCHHHHHHHHCCCHHHCCCCCCCEEEHHHEEEECCCCCCCCCCEEEEEC PTDAELRPAKALGKGEKERNARDARYSVVFHGDDQPAITYTPETLEEFQRFAPGSTHTLQ CCCCCCCCHHHHCCCCHHCCCCCCEEEEEEECCCCCCEEECHHHHHHHHHHCCCCCCCHH QEQGKVSVVPQTPPAQATP HCCCCEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA