Definition Myxococcus xanthus DK 1622 chromosome, complete genome.
Accession NC_008095
Length 9,139,763

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The map label for this gene is 108757234

Identifier: 108757234

GI number: 108757234

Start: 6722301

End: 6723707

Strand: Direct

Name: 108757234

Synonym: MXAN_5402

Alternate gene names: NA

Gene position: 6722301-6723707 (Clockwise)

Preceding gene: 108758639

Following gene: 108757983

Centisome position: 73.55

GC content: 64.82

Gene sequence:

>1407_bases
ATGAAGCCGCAGGGGGGAATCCCACACATCGCTGTCGCAGTCATGGGCCTTTTCATGATGGACACAGGCATGTCCCACGC
CCAGGAAGTGCAGCGGCGTGGCAGCACCAGCTACATGCCCGTGGCCCAGACGGAGCCCTTCGCTGACGTCATGGCGCGGA
TGAAGGCGGAGAAGCCCAAAATCACCGCGCGCCACCAGCAGCTCCTGGAACACCGCTATGACCTGGGAAACCGTCCGGCC
CGGGGCGTCACGATGTCCCGGGGGAAAGCCGTCCAGGAAGGCGTGCGGGTGAAGCTCCCACAGGGCGTGACCTGGGAGTC
CCTCGCCGCCATGAGCCCGGAGGCGATTCGAGACAGGGGGCTCTTCCCCGCGGGCTTCATGCCATTGCCCCACCCGAATC
ATCCGGAAGGCGGCATGGTCTTCCCCAAGTTCCACATCGATGAAATCAAGCGGCAGGAAGGGAGGGACCTCACACGGTTC
GACCTCGACTTCGACCTGCCGGACCACCTGCTGCCGGAGTTCCCGCCGCCCATCTTCCTCACCACGCGCCCGGACCTGGG
GGATGTCTCGCAGGGGAAGCTGGTGACCATCATGAACGTCCAGGAGCTGTTCAACGGCCTCCTGAATCCGAAGCAACTGG
AAGGCCTCCGGCTGCTCGTCACGCCCTTTCCCCAGCAGCAGTTCAATCAGACCGCCGACCGCCGCTCCGAGCTGCCCAGC
CGGGGCGTGAGCTGCTTCGACTGTCACGTCAACGGCCACTCCAATGGCGCCACGCACCTGGTGGGCGACATCCGGCCCCA
GGAGTTCCGCCACCGCATCGATACGCCGACGCTCCGCGGAGTGAACATCCAGCGCCTGTTCGGCTCACAGCGGGCCCTGA
AGACCGTGGAGGACTTCACCGAGTTCGAGCAGCGCGCGGCGTACTTCGATGGCGACCCGGTCATCGCGACGAAGAAAGGG
GTCAACATCCTCGAGCGGGGTAGCCAGGTACACTTCATGGCGGAGGTCCAGGCCCTCCTCGACTTCCCGCCGGCCCCCAA
GCTCCGCTTCGACGGGAAGCTGGACCCGAAGAAGGCCACCCAGCAGGAGATGCGCGGACAGACGCTCTTCTTCGGCAAGG
CGCAGTGCTCCGTGTGCCACCTCCCGCCCTATTACACAGACAACCTGATGCACAACCTGCAGGCGGAGCGCTTCTACAAG
CCCCGGCTGGTAAACGGCGCGGTGATGGGCTCCGATGGCCCCATCAAGACGTTCCCCCTGCGAGGCATCAAGGACTCTCC
GCCCTATCTCCATGATGGGCGGCTCATGACGCTGGAGGACACGGTGGAGTTCTTCAACCTCGTGCTGGAGACCCGGCTCA
ACGCGCAGGAGAAGAAGGACCTGGTCGCGTTCATGCGCACGCTCTGA

Upstream 100 bases:

>100_bases
CGGTTCGCCAACGGTTCGGACAAACCCCCGCCGCAATTGAATACCTTGCCTGAACAGCAGGACACCATTCCGGGTGAAGT
CAGCCCCAAGGAGGACTTGC

Downstream 100 bases:

>100_bases
CGCGCGCGCGGCAAGCCTGCCTCGGACTCACGAGCGGCACCCTCCCGCCGAGCCACACGTGGCTGGGCGGGAGGGCGCCG
CGAGACTCCGCACGTACGCC

Product: putative cytochrome c

Products: NA

Alternate protein names: Cytochrome C Hsc; Cytochrome C; Cytochrome C Peroxidase-Like Protein; Cytochrome-C Peroxidase; Cytochrome C Catalase CCC; Cytochrome; Methylamine Utilization Protein/Cytochrome C Peroxidase

Number of amino acids: Translated: 468; Mature: 468

Protein sequence:

>468_residues
MKPQGGIPHIAVAVMGLFMMDTGMSHAQEVQRRGSTSYMPVAQTEPFADVMARMKAEKPKITARHQQLLEHRYDLGNRPA
RGVTMSRGKAVQEGVRVKLPQGVTWESLAAMSPEAIRDRGLFPAGFMPLPHPNHPEGGMVFPKFHIDEIKRQEGRDLTRF
DLDFDLPDHLLPEFPPPIFLTTRPDLGDVSQGKLVTIMNVQELFNGLLNPKQLEGLRLLVTPFPQQQFNQTADRRSELPS
RGVSCFDCHVNGHSNGATHLVGDIRPQEFRHRIDTPTLRGVNIQRLFGSQRALKTVEDFTEFEQRAAYFDGDPVIATKKG
VNILERGSQVHFMAEVQALLDFPPAPKLRFDGKLDPKKATQQEMRGQTLFFGKAQCSVCHLPPYYTDNLMHNLQAERFYK
PRLVNGAVMGSDGPIKTFPLRGIKDSPPYLHDGRLMTLEDTVEFFNLVLETRLNAQEKKDLVAFMRTL

Sequences:

>Translated_468_residues
MKPQGGIPHIAVAVMGLFMMDTGMSHAQEVQRRGSTSYMPVAQTEPFADVMARMKAEKPKITARHQQLLEHRYDLGNRPA
RGVTMSRGKAVQEGVRVKLPQGVTWESLAAMSPEAIRDRGLFPAGFMPLPHPNHPEGGMVFPKFHIDEIKRQEGRDLTRF
DLDFDLPDHLLPEFPPPIFLTTRPDLGDVSQGKLVTIMNVQELFNGLLNPKQLEGLRLLVTPFPQQQFNQTADRRSELPS
RGVSCFDCHVNGHSNGATHLVGDIRPQEFRHRIDTPTLRGVNIQRLFGSQRALKTVEDFTEFEQRAAYFDGDPVIATKKG
VNILERGSQVHFMAEVQALLDFPPAPKLRFDGKLDPKKATQQEMRGQTLFFGKAQCSVCHLPPYYTDNLMHNLQAERFYK
PRLVNGAVMGSDGPIKTFPLRGIKDSPPYLHDGRLMTLEDTVEFFNLVLETRLNAQEKKDLVAFMRTL
>Mature_468_residues
MKPQGGIPHIAVAVMGLFMMDTGMSHAQEVQRRGSTSYMPVAQTEPFADVMARMKAEKPKITARHQQLLEHRYDLGNRPA
RGVTMSRGKAVQEGVRVKLPQGVTWESLAAMSPEAIRDRGLFPAGFMPLPHPNHPEGGMVFPKFHIDEIKRQEGRDLTRF
DLDFDLPDHLLPEFPPPIFLTTRPDLGDVSQGKLVTIMNVQELFNGLLNPKQLEGLRLLVTPFPQQQFNQTADRRSELPS
RGVSCFDCHVNGHSNGATHLVGDIRPQEFRHRIDTPTLRGVNIQRLFGSQRALKTVEDFTEFEQRAAYFDGDPVIATKKG
VNILERGSQVHFMAEVQALLDFPPAPKLRFDGKLDPKKATQQEMRGQTLFFGKAQCSVCHLPPYYTDNLMHNLQAERFYK
PRLVNGAVMGSDGPIKTFPLRGIKDSPPYLHDGRLMTLEDTVEFFNLVLETRLNAQEKKDLVAFMRTL

Specific function: Unknown

COG id: COG1858

COG function: function code P; Cytochrome c peroxidase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 52826; Mature: 52826

Theoretical pI: Translated: 8.86; Mature: 8.86

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPQGGIPHIAVAVMGLFMMDTGMSHAQEVQRRGSTSYMPVAQTEPFADVMARMKAEKPK
CCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCC
ITARHQQLLEHRYDLGNRPARGVTMSRGKAVQEGVRVKLPQGVTWESLAAMSPEAIRDRG
HHHHHHHHHHHHHCCCCCCCCCEECCCCHHHHCCCEEECCCCCCHHHHHHCCCHHHHHCC
LFPAGFMPLPHPNHPEGGMVFPKFHIDEIKRQEGRDLTRFDLDFDLPDHLLPEFPPPIFL
CCCCCCCCCCCCCCCCCCEECCCCCHHHHHHHCCCCCEEEECCCCCCHHHCCCCCCCEEE
TTRPDLGDVSQGKLVTIMNVQELFNGLLNPKQLEGLRLLVTPFPQQQFNQTADRRSELPS
ECCCCCCCCCCCCEEEEEEHHHHHHHCCCHHHHCCEEEEECCCCHHHHHHHHHHHHCCCC
RGVSCFDCHVNGHSNGATHLVGDIRPQEFRHRIDTPTLRGVNIQRLFGSQRALKTVEDFT
CCCEEEEEEECCCCCCCEEEEECCCHHHHHHHCCCCCCCCCCHHHHHCCHHHHHHHHHHH
EFEQRAAYFDGDPVIATKKGVNILERGSQVHFMAEVQALLDFPPAPKLRFDGKLDPKKAT
HHHHHHHCCCCCCEEEECCCCHHHHCCCCEEHHHHHHHHHCCCCCCCEEECCCCCHHHHH
QQEMRGQTLFFGKAQCSVCHLPPYYTDNLMHNLQAERFYKPRLVNGAVMGSDGPIKTFPL
HHHHCCCEEEEECCCCEEEECCCCHHHHHHHHHHHHHHCCCEEECCEEECCCCCEEEECC
RGIKDSPPYLHDGRLMTLEDTVEFFNLVLETRLNAQEKKDLVAFMRTL
CCCCCCCCCEECCEEEEHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHC
>Mature Secondary Structure
MKPQGGIPHIAVAVMGLFMMDTGMSHAQEVQRRGSTSYMPVAQTEPFADVMARMKAEKPK
CCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCC
ITARHQQLLEHRYDLGNRPARGVTMSRGKAVQEGVRVKLPQGVTWESLAAMSPEAIRDRG
HHHHHHHHHHHHHCCCCCCCCCEECCCCHHHHCCCEEECCCCCCHHHHHHCCCHHHHHCC
LFPAGFMPLPHPNHPEGGMVFPKFHIDEIKRQEGRDLTRFDLDFDLPDHLLPEFPPPIFL
CCCCCCCCCCCCCCCCCCEECCCCCHHHHHHHCCCCCEEEECCCCCCHHHCCCCCCCEEE
TTRPDLGDVSQGKLVTIMNVQELFNGLLNPKQLEGLRLLVTPFPQQQFNQTADRRSELPS
ECCCCCCCCCCCCEEEEEEHHHHHHHCCCHHHHCCEEEEECCCCHHHHHHHHHHHHCCCC
RGVSCFDCHVNGHSNGATHLVGDIRPQEFRHRIDTPTLRGVNIQRLFGSQRALKTVEDFT
CCCEEEEEEECCCCCCCEEEEECCCHHHHHHHCCCCCCCCCCHHHHHCCHHHHHHHHHHH
EFEQRAAYFDGDPVIATKKGVNILERGSQVHFMAEVQALLDFPPAPKLRFDGKLDPKKAT
HHHHHHHCCCCCCEEEECCCCHHHHCCCCEEHHHHHHHHHCCCCCCCEEECCCCCHHHHH
QQEMRGQTLFFGKAQCSVCHLPPYYTDNLMHNLQAERFYKPRLVNGAVMGSDGPIKTFPL
HHHHCCCEEEEECCCCEEEECCCCHHHHHHHHHHHHHHCCCEEECCEEECCCCCEEEECC
RGIKDSPPYLHDGRLMTLEDTVEFFNLVLETRLNAQEKKDLVAFMRTL
CCCCCCCCCEECCEEEEHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA