| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is glmS [H]
Identifier: 108757939
GI number: 108757939
Start: 558607
End: 560517
Strand: Reverse
Name: glmS [H]
Synonym: MXAN_0501
Alternate gene names: 108757939
Gene position: 560517-558607 (Counterclockwise)
Preceding gene: 108763736
Following gene: 108759251
Centisome position: 6.13
GC content: 67.24
Gene sequence:
>1911_bases ATGTGCGGCATCGTCGGCGCGGTTTCCCAGCGCAACATCGTTCCCATCCTCGTCCAGGGCCTGCAGCGCCTTGAGTACCG TGGCTATGACTCCTGCGGCGTGGCCGTGCACGAGGCCAGCATGGGCAACAACCCCATGGGCGGCCTGCACCGCGCACGCA GCACGGCGCGCGTGGCCGAGCTGCAGGCGCAGGTCGATGCCGAACATCTGCAGGGCGCGACCGGCATCGCCCACACGCGC TGGGCCACGCATGGTGCGCCGGCGGTGCACAACGCGCACCCGCATTTCAGCCACGGCCCCAACGCCGCGCCTGCCGAGAC CGACCGCGCTGGCCGCGTCGCGCTGGTGCACAACGGCATCATCGAGAACCACCAGGAGCTGCGCCGCATGCTGCAGGCGC GTGGCTATGCGTTCTCGAGCCAGACCGACACCGAGGTCATCGCGCATCTGGTCGACAGCCTGTATGACGGCGACCTGTTC GACGCCGTGAAGGCGGCCGTCGCGCAACTGCACGGGGCCTATGCGATCGCGGTGATGCACAAGGACGAACCGCACCGCGT GGTCGGCGCGCGCGCCGGATCGCCGCTGGTGCTGGGCGTGGGCGTGGGCGAGAACTTCCTCGCGAGCGACGCGATGGCGC TGGCGGGCGTGACCGACCAGGTCGTCTATCTGAAGGAGGGCGATCTCGTCGACCTGCAGCCCGGCCGCTACTGGCTCGTC GATCACGACGGCCAGCGATTGAGCGAGGCACAGCGCCCCGTGCGCACCGTACACGCACACAGCGGCGCGGCCGAGCTGGG TCCCTACCGCCACTACATGCAGAAGGAAATCTTCGAGCAGCCACGTGCGATCGCCGACACGCTCGAGGGAGTGCAGGGCA TCGTGCCCGAGCTGTTCGACGGCCTTGATGCCGACGGCAGCACCCGCACAGCCGCGTGGCGCGTGTTCAAGGAAATCGAC TCGGTGCTGATCCTCGCCTGCGGCACCAGCTACTACAGCGGCTGCGCGGCCAAGTACTGGATCGAGGCCATCGCGAAGCT CACGTGCAACGTCGAAGTCGCCAGCGAATACCGCTACCGCACCAGCGTGCCGAACCCGAAGACGCTGGTAGTCACCATCA GTCAATCCGGCGAAACGGCAGACACCCTGGCCGCGCTGCGCCATGCGCAGAGACTGGGCATGACGCACACGCTCACCGTC TGCAACGTGGCCACCAGCGCCATGGTGCGCGAATGCGAGCTGGCCTACATCACGCGCGCCGGCGTCGAGATCGGCGTGGC CTCCACCAAGGCGTTCACCACGCAGTTGGCGGGCCTGTTCCTGCTCACGCTCGCGCTCGCGCAATCCAAGGGCCACCTGA GCCAGGAGCAGGAAGCGCAATACCTCACCTCCATGCGCCATCTGCCCGTCGCACTGCAGGCCGTGCTCGCACTCGAGCCG CAGGTCATCAGCTGGGCCGAAGATTTCGCGAAGATGGAAAATGCGCTGTTCCTCGGGCGCGGCATCCACTACCCGATCGC GCTCGAAGGCGCGCTCAAGCTCAAGGAAATCAGCTACATCCACGCCGAGGCCTACCCCGCAGGCGAGCTCAAGCACGGCC CGCTCGCGCTGGTCACCAGCAGCATGCCGGTGGTCACCGTCGCGCCGCACGACGAGTTGCTCGAAAAGCTCAAGAACAAC ATGCAGGAAGTGCGCGCGCGCGGCGGCGTGCTCTACGTGCTGGCCGACGGCGACTCGCAGATCGAAAGCGAAGACGGCAT CCACGTGATCCGCATGCCCGAGCACTACGGCGCGTTGAGCCCGATTTTGCACGTCGTGCCGCTGCAACTGCTCGCCTACC ACACGGCCGTCGCACGCGGCACGGACGTGGACAAGCCGCGCAATCTGGCGAAGTCTTTGACCGTGGAGTGA
Upstream 100 bases:
>100_bases AAATCGCTCTGCGCACCATCGCTGACATTCGGGGGCGCAGCACGGCCCCATGGTTCAGCAGTCGGAAGATTCGGATCTGC CCCCAGTAGGAGCAATCACC
Downstream 100 bases:
>100_bases GGGGCTGGAGGGAGTGTTCGACGGTGCTCCCGGCAAGGTGGCAGTGACAGCGCCAAACTGAAGAGCCGCCATTGCGACCG TTGACTTCAGAGGGATGGGG
Product: glucosamine--fructose-6-phosphate aminotransferase
Products: NA
Alternate protein names: D-fructose-6-phosphate amidotransferase; GFAT; Glucosamine-6-phosphate synthase; Hexosephosphate aminotransferase; L-glutamine-D-fructose-6-phosphate amidotransferase [H]
Number of amino acids: Translated: 636; Mature: 636
Protein sequence:
>636_residues MCGIVGAVSQRNIVPILVQGLQRLEYRGYDSCGVAVHEASMGNNPMGGLHRARSTARVAELQAQVDAEHLQGATGIAHTR WATHGAPAVHNAHPHFSHGPNAAPAETDRAGRVALVHNGIIENHQELRRMLQARGYAFSSQTDTEVIAHLVDSLYDGDLF DAVKAAVAQLHGAYAIAVMHKDEPHRVVGARAGSPLVLGVGVGENFLASDAMALAGVTDQVVYLKEGDLVDLQPGRYWLV DHDGQRLSEAQRPVRTVHAHSGAAELGPYRHYMQKEIFEQPRAIADTLEGVQGIVPELFDGLDADGSTRTAAWRVFKEID SVLILACGTSYYSGCAAKYWIEAIAKLTCNVEVASEYRYRTSVPNPKTLVVTISQSGETADTLAALRHAQRLGMTHTLTV CNVATSAMVRECELAYITRAGVEIGVASTKAFTTQLAGLFLLTLALAQSKGHLSQEQEAQYLTSMRHLPVALQAVLALEP QVISWAEDFAKMENALFLGRGIHYPIALEGALKLKEISYIHAEAYPAGELKHGPLALVTSSMPVVTVAPHDELLEKLKNN MQEVRARGGVLYVLADGDSQIESEDGIHVIRMPEHYGALSPILHVVPLQLLAYHTAVARGTDVDKPRNLAKSLTVE
Sequences:
>Translated_636_residues MCGIVGAVSQRNIVPILVQGLQRLEYRGYDSCGVAVHEASMGNNPMGGLHRARSTARVAELQAQVDAEHLQGATGIAHTR WATHGAPAVHNAHPHFSHGPNAAPAETDRAGRVALVHNGIIENHQELRRMLQARGYAFSSQTDTEVIAHLVDSLYDGDLF DAVKAAVAQLHGAYAIAVMHKDEPHRVVGARAGSPLVLGVGVGENFLASDAMALAGVTDQVVYLKEGDLVDLQPGRYWLV DHDGQRLSEAQRPVRTVHAHSGAAELGPYRHYMQKEIFEQPRAIADTLEGVQGIVPELFDGLDADGSTRTAAWRVFKEID SVLILACGTSYYSGCAAKYWIEAIAKLTCNVEVASEYRYRTSVPNPKTLVVTISQSGETADTLAALRHAQRLGMTHTLTV CNVATSAMVRECELAYITRAGVEIGVASTKAFTTQLAGLFLLTLALAQSKGHLSQEQEAQYLTSMRHLPVALQAVLALEP QVISWAEDFAKMENALFLGRGIHYPIALEGALKLKEISYIHAEAYPAGELKHGPLALVTSSMPVVTVAPHDELLEKLKNN MQEVRARGGVLYVLADGDSQIESEDGIHVIRMPEHYGALSPILHVVPLQLLAYHTAVARGTDVDKPRNLAKSLTVE >Mature_636_residues MCGIVGAVSQRNIVPILVQGLQRLEYRGYDSCGVAVHEASMGNNPMGGLHRARSTARVAELQAQVDAEHLQGATGIAHTR WATHGAPAVHNAHPHFSHGPNAAPAETDRAGRVALVHNGIIENHQELRRMLQARGYAFSSQTDTEVIAHLVDSLYDGDLF DAVKAAVAQLHGAYAIAVMHKDEPHRVVGARAGSPLVLGVGVGENFLASDAMALAGVTDQVVYLKEGDLVDLQPGRYWLV DHDGQRLSEAQRPVRTVHAHSGAAELGPYRHYMQKEIFEQPRAIADTLEGVQGIVPELFDGLDADGSTRTAAWRVFKEID SVLILACGTSYYSGCAAKYWIEAIAKLTCNVEVASEYRYRTSVPNPKTLVVTISQSGETADTLAALRHAQRLGMTHTLTV CNVATSAMVRECELAYITRAGVEIGVASTKAFTTQLAGLFLLTLALAQSKGHLSQEQEAQYLTSMRHLPVALQAVLALEP QVISWAEDFAKMENALFLGRGIHYPIALEGALKLKEISYIHAEAYPAGELKHGPLALVTSSMPVVTVAPHDELLEKLKNN MQEVRARGGVLYVLADGDSQIESEDGIHVIRMPEHYGALSPILHVVPLQLLAYHTAVARGTDVDKPRNLAKSLTVE
Specific function: Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source [H]
COG id: COG0449
COG function: function code M; Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 SIS domains [H]
Homologues:
Organism=Homo sapiens, GI4826742, Length=705, Percent_Identity=34.8936170212766, Blast_Score=384, Evalue=1e-106, Organism=Homo sapiens, GI205277386, Length=703, Percent_Identity=34.1394025604552, Blast_Score=384, Evalue=1e-106, Organism=Escherichia coli, GI1790167, Length=643, Percent_Identity=51.3219284603421, Blast_Score=612, Evalue=1e-176, Organism=Escherichia coli, GI1788651, Length=274, Percent_Identity=25.1824817518248, Blast_Score=69, Evalue=1e-12, Organism=Caenorhabditis elegans, GI17539970, Length=443, Percent_Identity=37.020316027088, Blast_Score=270, Evalue=1e-72, Organism=Caenorhabditis elegans, GI17532899, Length=437, Percent_Identity=37.070938215103, Blast_Score=265, Evalue=6e-71, Organism=Caenorhabditis elegans, GI17532897, Length=440, Percent_Identity=36.5909090909091, Blast_Score=264, Evalue=1e-70, Organism=Saccharomyces cerevisiae, GI6322745, Length=446, Percent_Identity=33.6322869955157, Blast_Score=243, Evalue=6e-65, Organism=Saccharomyces cerevisiae, GI6323731, Length=438, Percent_Identity=28.9954337899543, Blast_Score=181, Evalue=3e-46, Organism=Saccharomyces cerevisiae, GI6323730, Length=220, Percent_Identity=33.6363636363636, Blast_Score=126, Evalue=1e-29, Organism=Drosophila melanogaster, GI21357745, Length=725, Percent_Identity=34.2068965517241, Blast_Score=370, Evalue=1e-102, Organism=Drosophila melanogaster, GI28573187, Length=268, Percent_Identity=26.4925373134328, Blast_Score=82, Evalue=1e-15, Organism=Drosophila melanogaster, GI24659598, Length=211, Percent_Identity=27.4881516587678, Blast_Score=74, Evalue=4e-13, Organism=Drosophila melanogaster, GI24659604, Length=191, Percent_Identity=27.7486910994764, Blast_Score=67, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000583 - InterPro: IPR017932 - InterPro: IPR005855 - InterPro: IPR001347 [H]
Pfam domain/function: PF00310 GATase_2; PF01380 SIS [H]
EC number: =2.6.1.16 [H]
Molecular weight: Translated: 68789; Mature: 68789
Theoretical pI: Translated: 6.48; Mature: 6.48
Prosite motif: PS00443 GATASE_TYPE_II
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCGIVGAVSQRNIVPILVQGLQRLEYRGYDSCGVAVHEASMGNNPMGGLHRARSTARVAE CCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHH LQAQVDAEHLQGATGIAHTRWATHGAPAVHNAHPHFSHGPNAAPAETDRAGRVALVHNGI HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCH IENHQELRRMLQARGYAFSSQTDTEVIAHLVDSLYDGDLFDAVKAAVAQLHGAYAIAVMH HCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEEEE KDEPHRVVGARAGSPLVLGVGVGENFLASDAMALAGVTDQVVYLKEGDLVDLQPGRYWLV CCCCCEEEECCCCCCEEEEECCCCHHHHHHHHHHCCCCCEEEEEECCCEEEECCCEEEEE DHDGQRLSEAQRPVRTVHAHSGAAELGPYRHYMQKEIFEQPRAIADTLEGVQGIVPELFD ECCCHHHHHHHHHHHHHHCCCCCHHCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHC GLDADGSTRTAAWRVFKEIDSVLILACGTSYYSGCAAKYWIEAIAKLTCNVEVASEYRYR CCCCCCCCHHHHHHHHHHHHHEEEEEECCHHHCCHHHHHHHHHHHHHHCCEEECCCCCEE TSVPNPKTLVVTISQSGETADTLAALRHAQRLGMTHTLTVCNVATSAMVRECELAYITRA CCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHCCHHEEHHHHHHHHHHHHHHHHHEEECC GVEIGVASTKAFTTQLAGLFLLTLALAQSKGHLSQEQEAQYLTSMRHLPVALQAVLALEP CCEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC QVISWAEDFAKMENALFLGRGIHYPIALEGALKLKEISYIHAEAYPAGELKHGPLALVTS HHHHHHHHHHHHHHHEEECCCCCCCEEECCCEEHHHHHEEEECCCCCCCCCCCCEEEEEC SMPVVTVAPHDELLEKLKNNMQEVRARGGVLYVLADGDSQIESEDGIHVIRMPEHYGALS CCCEEEECCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCEEEEECCHHHCHHH PILHVVPLQLLAYHTAVARGTDVDKPRNLAKSLTVE HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCC >Mature Secondary Structure MCGIVGAVSQRNIVPILVQGLQRLEYRGYDSCGVAVHEASMGNNPMGGLHRARSTARVAE CCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHH LQAQVDAEHLQGATGIAHTRWATHGAPAVHNAHPHFSHGPNAAPAETDRAGRVALVHNGI HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCH IENHQELRRMLQARGYAFSSQTDTEVIAHLVDSLYDGDLFDAVKAAVAQLHGAYAIAVMH HCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEEEE KDEPHRVVGARAGSPLVLGVGVGENFLASDAMALAGVTDQVVYLKEGDLVDLQPGRYWLV CCCCCEEEECCCCCCEEEEECCCCHHHHHHHHHHCCCCCEEEEEECCCEEEECCCEEEEE DHDGQRLSEAQRPVRTVHAHSGAAELGPYRHYMQKEIFEQPRAIADTLEGVQGIVPELFD ECCCHHHHHHHHHHHHHHCCCCCHHCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHC GLDADGSTRTAAWRVFKEIDSVLILACGTSYYSGCAAKYWIEAIAKLTCNVEVASEYRYR CCCCCCCCHHHHHHHHHHHHHEEEEEECCHHHCCHHHHHHHHHHHHHHCCEEECCCCCEE TSVPNPKTLVVTISQSGETADTLAALRHAQRLGMTHTLTVCNVATSAMVRECELAYITRA CCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHCCHHEEHHHHHHHHHHHHHHHHHEEECC GVEIGVASTKAFTTQLAGLFLLTLALAQSKGHLSQEQEAQYLTSMRHLPVALQAVLALEP CCEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC QVISWAEDFAKMENALFLGRGIHYPIALEGALKLKEISYIHAEAYPAGELKHGPLALVTS HHHHHHHHHHHHHHHEEECCCCCCCEEECCCEEHHHHHEEEECCCCCCCCCCCCEEEEEC SMPVVTVAPHDELLEKLKNNMQEVRARGGVLYVLADGDSQIESEDGIHVIRMPEHYGALS CCCEEEECCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCEEEEECCHHHCHHH PILHVVPLQLLAYHTAVARGTDVDKPRNLAKSLTVE HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12910271 [H]