| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is 108757913
Identifier: 108757913
GI number: 108757913
Start: 1887344
End: 1889431
Strand: Direct
Name: 108757913
Synonym: MXAN_1604
Alternate gene names: NA
Gene position: 1887344-1889431 (Clockwise)
Preceding gene: 108757494
Following gene: 108762805
Centisome position: 20.65
GC content: 72.08
Gene sequence:
>2088_bases GTGTCTTGTCCGGGCATGGCACCGGACCGAGGAGTCTGCGTGACGCTGTGGTCGCTCACTGTTCAAGGTGTGCTGGCCCG CCCCCGAAGCTGGGTGGTGGGGCTGCTGGCGGCAGGCGCGGCGGCGCTGCTGACGCCGGGTGTGTCGTTGATGGGTAGCA TCCATGACGGCACGCGGCGAAGTCTCATCGAGAGCGGCGCGGGGGACCTCCAGGTCTACGCCGCCGCCTCCACGGGAACG CCCCAGGTCGTGGTGGGGCCAGGGGGCGTCCCGGACCTGCAACCCATTCCGGACTACGGCGCCCTGGAGCCGCGGCTGCG CGACCTCCCCGGCATCCAGGAGGTGGTGCCGCTGGAGCTGGGCATGGGCGCTGTGTTCCGTGGCAACGCCCTGGATGAAA AGCTGGCGGTGTTGCGCGAGGCGGCGCGGGCGCCGGCCTCCGAGGAACGGGACGCACGGCTGCGCCGTCTGGGCGAGGAC CTGCGGCTGACGCTGGCGCGGGTGGCGCGCAACGCGGATCGCCGGAGCGAGGCCTTCGCGGAAGAGCCCGCCTTCGCGGA TGACCTGCGCGTGCTGCGGGACGCGGCCGAGCCCGCCTTCTGGGAGCGGCTCACCGAGGACCCACAGGGCCTGCTGGAGG TGTTGGAGAACCGCGTGGCGCGGCAAGCGGGCGAGGGTGAAGAGCTTCCGGTGGACTACCTGGGCACGGACGTGGCGCGC TTCGCCCGGGCCTTCCCGCGCTTCGAGCTCGTCTCCGGGCAGCTTCCTCCGCCAGGGACGCGGGGCCTCGTCATGGGGCA CGCGACGTACGAGCAGCACTTCAAGCACCCCATCGCCGTGCGCATGGACACGCTGCGCCGCGAGCGCGAGCGGGGCCTCA CGTTGGCGGAGGACGAGCAGCTGCGCACGCTGGTGGAGCGCAACGTCGCGGAGGTGCCGGACCTGGTGGCTCGCCTGGAC ATCGAGCGCGCCACGGCGCTCCAGGCCGGACTGGCCCGCGTGCTGGGCGAGCCGGGCGAACTGGAGGCCCTGCTGGCGCG CTTCCTCTCGGTGGACGACGCCAACTTCGACACCCGCTTCGGACAGTTCTACGGGGAGCTGGCGCCCTCGCTGCCGCTGT ACCGGCTCAAGCCCGGGGACGTGCTGTCACTGAAGACGCCGCTGGAGAGTGGCACCGCCGTGCCAGTGCGAGTCTTCGGC ATCTTCCGCTTCCGGGGCCTGGGCGGCGACGACGGCCGGGTCAACACCATGAGCGTGGTGGACCTCGTCACGGCGCGGCA CCTGTCTGGCCGCTTCACCCAGGCACAGCAGGACGAGGCGCGGGCGCTGTTCGAGACCTTTGGCATGGAAGGGGAGGCCA TGGCGCCCCCCGAGTCCCTGGACGCCTTCCATCCGCCTGACATCGTGGACGCGGAGGCGCAGACGGCGCACACCGAACAG GCCCCGGTCTTCGAGCGTGCTCGGGCCCTGCCGGAGACCTTCTCCGAGGACGAGCTCTCACGCGGCACGGTGTTGCAGGC CGCGGTGGTGCTGGCGCCCGGCGCCTCCGCCGAGGACGTCGCGGCCCGCATGCGCGCGCTGCCCGGTGGTGAAGCGCTGG CCACGGTGGGTTGGCAGGAGGCGGGTGGGTTGCTGGGCGGTCTGGTGGTGATGCTCCAGGCGGTGCTGCTGCTCTTCGCG CTGTTGATGTCCTCCTTCGTCGCGCTGGTCGCCGCTGGAACGCTGCTGCTGCTGGCGCGGGAACGCGTGGCGGAGGTCGG CACGCTGCGCGCGGTGGGAATGCAACGTCGCGAGGTCTTCACCTCGCTGCTGCTGGAAGGGTCGCTGCTGGGCGGTATCG GCAGCGTCCTGGGCGCGGTGCTGGGCGCGGCGTTGTTGTGGCTTGCGACCGGAGACGGCGTGGCGGTGGAGGATGGCTCC CTGCAGTTCTTCCTGGGCGGCCCCGTGCTGCGTCCAGCGCTGGCGCTGGGCGGAACCGTGGCCGTGGTGGTGGCGGTGAC GGCCGTGGTGCTGCTGGCGACACTGGTACCGGCCTGGCGAGGCAGCGCGGTGGAGCCCATCGAAGCCATGCGGAAGGGCG AGGGCTGA
Upstream 100 bases:
>100_bases ACGCGCAGGTGGACCTGCTCCTGCGCGTGCTGGAGCCCACGTGAGCGAGAGGCGGTAGTCCCTCCGCCCCGTCCGTTGTA GCGTCCAACGACCCGGGCAT
Downstream 100 bases:
>100_bases ACCGATGCGCGCACTTCTCCAGATTGCCTTCCGAAATCTCCTGGCCCACCGCGAGCGGGGACTGTTGCTGCTCATCGTGC TCGCGGGCGCCAGCGCCGTG
Product: putative permease
Products: NA
Alternate protein names: Permease; ABC Transporter Permease
Number of amino acids: Translated: 695; Mature: 694
Protein sequence:
>695_residues MSCPGMAPDRGVCVTLWSLTVQGVLARPRSWVVGLLAAGAAALLTPGVSLMGSIHDGTRRSLIESGAGDLQVYAAASTGT PQVVVGPGGVPDLQPIPDYGALEPRLRDLPGIQEVVPLELGMGAVFRGNALDEKLAVLREAARAPASEERDARLRRLGED LRLTLARVARNADRRSEAFAEEPAFADDLRVLRDAAEPAFWERLTEDPQGLLEVLENRVARQAGEGEELPVDYLGTDVAR FARAFPRFELVSGQLPPPGTRGLVMGHATYEQHFKHPIAVRMDTLRRERERGLTLAEDEQLRTLVERNVAEVPDLVARLD IERATALQAGLARVLGEPGELEALLARFLSVDDANFDTRFGQFYGELAPSLPLYRLKPGDVLSLKTPLESGTAVPVRVFG IFRFRGLGGDDGRVNTMSVVDLVTARHLSGRFTQAQQDEARALFETFGMEGEAMAPPESLDAFHPPDIVDAEAQTAHTEQ APVFERARALPETFSEDELSRGTVLQAAVVLAPGASAEDVAARMRALPGGEALATVGWQEAGGLLGGLVVMLQAVLLLFA LLMSSFVALVAAGTLLLLARERVAEVGTLRAVGMQRREVFTSLLLEGSLLGGIGSVLGAVLGAALLWLATGDGVAVEDGS LQFFLGGPVLRPALALGGTVAVVVAVTAVVLLATLVPAWRGSAVEPIEAMRKGEG
Sequences:
>Translated_695_residues MSCPGMAPDRGVCVTLWSLTVQGVLARPRSWVVGLLAAGAAALLTPGVSLMGSIHDGTRRSLIESGAGDLQVYAAASTGT PQVVVGPGGVPDLQPIPDYGALEPRLRDLPGIQEVVPLELGMGAVFRGNALDEKLAVLREAARAPASEERDARLRRLGED LRLTLARVARNADRRSEAFAEEPAFADDLRVLRDAAEPAFWERLTEDPQGLLEVLENRVARQAGEGEELPVDYLGTDVAR FARAFPRFELVSGQLPPPGTRGLVMGHATYEQHFKHPIAVRMDTLRRERERGLTLAEDEQLRTLVERNVAEVPDLVARLD IERATALQAGLARVLGEPGELEALLARFLSVDDANFDTRFGQFYGELAPSLPLYRLKPGDVLSLKTPLESGTAVPVRVFG IFRFRGLGGDDGRVNTMSVVDLVTARHLSGRFTQAQQDEARALFETFGMEGEAMAPPESLDAFHPPDIVDAEAQTAHTEQ APVFERARALPETFSEDELSRGTVLQAAVVLAPGASAEDVAARMRALPGGEALATVGWQEAGGLLGGLVVMLQAVLLLFA LLMSSFVALVAAGTLLLLARERVAEVGTLRAVGMQRREVFTSLLLEGSLLGGIGSVLGAVLGAALLWLATGDGVAVEDGS LQFFLGGPVLRPALALGGTVAVVVAVTAVVLLATLVPAWRGSAVEPIEAMRKGEG >Mature_694_residues SCPGMAPDRGVCVTLWSLTVQGVLARPRSWVVGLLAAGAAALLTPGVSLMGSIHDGTRRSLIESGAGDLQVYAAASTGTP QVVVGPGGVPDLQPIPDYGALEPRLRDLPGIQEVVPLELGMGAVFRGNALDEKLAVLREAARAPASEERDARLRRLGEDL RLTLARVARNADRRSEAFAEEPAFADDLRVLRDAAEPAFWERLTEDPQGLLEVLENRVARQAGEGEELPVDYLGTDVARF ARAFPRFELVSGQLPPPGTRGLVMGHATYEQHFKHPIAVRMDTLRRERERGLTLAEDEQLRTLVERNVAEVPDLVARLDI ERATALQAGLARVLGEPGELEALLARFLSVDDANFDTRFGQFYGELAPSLPLYRLKPGDVLSLKTPLESGTAVPVRVFGI FRFRGLGGDDGRVNTMSVVDLVTARHLSGRFTQAQQDEARALFETFGMEGEAMAPPESLDAFHPPDIVDAEAQTAHTEQA PVFERARALPETFSEDELSRGTVLQAAVVLAPGASAEDVAARMRALPGGEALATVGWQEAGGLLGGLVVMLQAVLLLFAL LMSSFVALVAAGTLLLLARERVAEVGTLRAVGMQRREVFTSLLLEGSLLGGIGSVLGAVLGAALLWLATGDGVAVEDGSL QFFLGGPVLRPALALGGTVAVVVAVTAVVLLATLVPAWRGSAVEPIEAMRKGEG
Specific function: Unknown
COG id: COG0577
COG function: function code V; ABC-type antimicrobial peptide transport system, permease component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 73881; Mature: 73750
Theoretical pI: Translated: 4.64; Mature: 4.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSCPGMAPDRGVCVTLWSLTVQGVLARPRSWVVGLLAAGAAALLTPGVSLMGSIHDGTRR CCCCCCCCCCCCEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHCCCCHHHH SLIESGAGDLQVYAAASTGTPQVVVGPGGVPDLQPIPDYGALEPRLRDLPGIQEVVPLEL HHHHCCCCCEEEEEEECCCCCEEEECCCCCCCCCCCCCCCCCCCHHHCCCCHHHHHHHHH GMGAVFRGNALDEKLAVLREAARAPASEERDARLRRLGEDLRLTLARVARNADRRSEAFA CCCCEEECCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH EEPAFADDLRVLRDAAEPAFWERLTEDPQGLLEVLENRVARQAGEGEELPVDYLGTDVAR CCCCCHHHHHHHHHHCCHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH FARAFPRFELVSGQLPPPGTRGLVMGHATYEQHFKHPIAVRMDTLRRERERGLTLAEDEQ HHHHCCCHHHHCCCCCCCCCCCEEEECHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCHHH LRTLVERNVAEVPDLVARLDIERATALQAGLARVLGEPGELEALLARFLSVDDANFDTRF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHH GQFYGELAPSLPLYRLKPGDVLSLKTPLESGTAVPVRVFGIFRFRGLGGDDGRVNTMSVV HHHHHHHCCCCCEEEECCCCEEEEECCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHH DLVTARHLSGRFTQAQQDEARALFETFGMEGEAMAPPESLDAFHPPDIVDAEAQTAHTEQ HHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCCCCCCCCCHHCCCCC APVFERARALPETFSEDELSRGTVLQAAVVLAPGASAEDVAARMRALPGGEALATVGWQE CHHHHHHHHCHHHCCHHHHCCCHHHHHHHEECCCCCHHHHHHHHHCCCCCCHHEECCHHH AGGLLGGLVVMLQAVLLLFALLMSSFVALVAAGTLLLLARERVAEVGTLRAVGMQRREVF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TSLLLEGSLLGGIGSVLGAVLGAALLWLATGDGVAVEDGSLQFFLGGPVLRPALALGGTV HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCEEEEECCCHHHHHHHHCHHH AVVVAVTAVVLLATLVPAWRGSAVEPIEAMRKGEG HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCC >Mature Secondary Structure SCPGMAPDRGVCVTLWSLTVQGVLARPRSWVVGLLAAGAAALLTPGVSLMGSIHDGTRR CCCCCCCCCCCEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHCCCCHHHH SLIESGAGDLQVYAAASTGTPQVVVGPGGVPDLQPIPDYGALEPRLRDLPGIQEVVPLEL HHHHCCCCCEEEEEEECCCCCEEEECCCCCCCCCCCCCCCCCCCHHHCCCCHHHHHHHHH GMGAVFRGNALDEKLAVLREAARAPASEERDARLRRLGEDLRLTLARVARNADRRSEAFA CCCCEEECCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH EEPAFADDLRVLRDAAEPAFWERLTEDPQGLLEVLENRVARQAGEGEELPVDYLGTDVAR CCCCCHHHHHHHHHHCCHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH FARAFPRFELVSGQLPPPGTRGLVMGHATYEQHFKHPIAVRMDTLRRERERGLTLAEDEQ HHHHCCCHHHHCCCCCCCCCCCEEEECHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCHHH LRTLVERNVAEVPDLVARLDIERATALQAGLARVLGEPGELEALLARFLSVDDANFDTRF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHH GQFYGELAPSLPLYRLKPGDVLSLKTPLESGTAVPVRVFGIFRFRGLGGDDGRVNTMSVV HHHHHHHCCCCCEEEECCCCEEEEECCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHH DLVTARHLSGRFTQAQQDEARALFETFGMEGEAMAPPESLDAFHPPDIVDAEAQTAHTEQ HHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCCCCCCCCCHHCCCCC APVFERARALPETFSEDELSRGTVLQAAVVLAPGASAEDVAARMRALPGGEALATVGWQE CHHHHHHHHCHHHCCHHHHCCCHHHHHHHEECCCCCHHHHHHHHHCCCCCCHHEECCHHH AGGLLGGLVVMLQAVLLLFALLMSSFVALVAAGTLLLLARERVAEVGTLRAVGMQRREVF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TSLLLEGSLLGGIGSVLGAVLGAALLWLATGDGVAVEDGSLQFFLGGPVLRPALALGGTV HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCEEEEECCCHHHHHHHHCHHH AVVVAVTAVVLLATLVPAWRGSAVEPIEAMRKGEG HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA