Definition Myxococcus xanthus DK 1622 chromosome, complete genome.
Accession NC_008095
Length 9,139,763

Click here to switch to the map view.

The map label for this gene is fmt [H]

Identifier: 108757821

GI number: 108757821

Start: 951518

End: 952366

Strand: Reverse

Name: fmt [H]

Synonym: MXAN_0837

Alternate gene names: 108757821

Gene position: 952366-951518 (Counterclockwise)

Preceding gene: 108758252

Following gene: 108763449

Centisome position: 10.42

GC content: 67.02

Gene sequence:

>849_bases
TTGACCATGCTCCGCTTCGCCTACGGCTGCATTCCCTCCGTCATGTCCCTGTACTTCGCCAACACCCTGGTGCGGCGAGC
AGGGCTGGCGCCCGCGTGCATCCTCCTGTCCGCGGGGGGCCTGCGCTTCCAGAAGAAGCGCTACACCCCGGCCCAAGTGC
TGCCTGTCTTCCTGAAGCAGTTTGGCCCGCGCTTCACCGGCTACAACGTGCTCGCCGGGCTGAGTGGCTCGCTGCCCTTC
AGCATTCCCGCCTCGGGGTTGATGAGCTTCCAGGCGCTCTCCCAGGCGTATGGCATTCCGCTGGTCATCAGTGATGACTT
CTCCGGAGCGGCCACGGTGAGCGAGCTCGAGCGGCACGGGGTGGAGTTGTTCCTCACCAGCATGTGCGATCAAATCATCC
GGGAGCCACTGCTCAGTCTGCCGCGCCATGGCTGTTTGAACATCCACCCATCGCTGCTGCCGGAGTTCCGCGGCGTGGAC
TCCGTCTTCCAGGCCATGCTGAACGGCGTGTCTGAGATTGGAACGACACTCCACCGCACCACCGCGCGCATCGACGCGGG
CGACGTGCTGGCCCAGAGCGCGTTCACCCGTACGGCCGCCGATTCCCACCTGGCGTTGACGGCGAAGGCGACCGCCGCGG
GCATTGCCCTGCTCAAGCGGCACATGGAGACCCTGGAGCGCGGAGAGACGCCGGACGCGCGCCCCATCGACGTGAGCCGG
GCGCGATATCCCTACCGCTCCTGGCCGGAACGGGAGGAGCTGCGCCGCTTCCACGCCCAGGGGAACACCTTCTGGCGGGC
GTCGGACTTCCGCCGCCTCCTCGCCTTCGAGGACGTGCTGGCGACATAG

Upstream 100 bases:

>100_bases
TGCTGCCCGCGCTGCTGAGCGAGAAGCAGCCGCAGGAGCGACGGAAGTTCCGCGTCTCCACCTTCGACGACGACTCGCAG
CCCCCCACTGACCAGGCCGC

Downstream 100 bases:

>100_bases
CGCGACACAAACGACACGCCGGGCGGGAGAGGCTCCCACCCGGCGTGGATGCTTCGGACCGCTGACTACTTGCCGCGGCT
GATGGACTCGCTGTGGATGG

Product: formyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 282; Mature: 281

Protein sequence:

>282_residues
MTMLRFAYGCIPSVMSLYFANTLVRRAGLAPACILLSAGGLRFQKKRYTPAQVLPVFLKQFGPRFTGYNVLAGLSGSLPF
SIPASGLMSFQALSQAYGIPLVISDDFSGAATVSELERHGVELFLTSMCDQIIREPLLSLPRHGCLNIHPSLLPEFRGVD
SVFQAMLNGVSEIGTTLHRTTARIDAGDVLAQSAFTRTAADSHLALTAKATAAGIALLKRHMETLERGETPDARPIDVSR
ARYPYRSWPEREELRRFHAQGNTFWRASDFRRLLAFEDVLAT

Sequences:

>Translated_282_residues
MTMLRFAYGCIPSVMSLYFANTLVRRAGLAPACILLSAGGLRFQKKRYTPAQVLPVFLKQFGPRFTGYNVLAGLSGSLPF
SIPASGLMSFQALSQAYGIPLVISDDFSGAATVSELERHGVELFLTSMCDQIIREPLLSLPRHGCLNIHPSLLPEFRGVD
SVFQAMLNGVSEIGTTLHRTTARIDAGDVLAQSAFTRTAADSHLALTAKATAAGIALLKRHMETLERGETPDARPIDVSR
ARYPYRSWPEREELRRFHAQGNTFWRASDFRRLLAFEDVLAT
>Mature_281_residues
TMLRFAYGCIPSVMSLYFANTLVRRAGLAPACILLSAGGLRFQKKRYTPAQVLPVFLKQFGPRFTGYNVLAGLSGSLPFS
IPASGLMSFQALSQAYGIPLVISDDFSGAATVSELERHGVELFLTSMCDQIIREPLLSLPRHGCLNIHPSLLPEFRGVDS
VFQAMLNGVSEIGTTLHRTTARIDAGDVLAQSAFTRTAADSHLALTAKATAAGIALLKRHMETLERGETPDARPIDVSRA
RYPYRSWPEREELRRFHAQGNTFWRASDFRRLLAFEDVLAT

Specific function: Modifies the free amino group of the aminoacyl moiety of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by:(I) promoting its recognition by IF2 and (II) impairing its binding to EFTu-

COG id: COG0223

COG function: function code J; Methionyl-tRNA formyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fmt family [H]

Homologues:

Organism=Escherichia coli, GI1788589, Length=141, Percent_Identity=28.3687943262411, Blast_Score=65, Evalue=4e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005794
- InterPro:   IPR005793
- InterPro:   IPR002376
- InterPro:   IPR011034
- InterPro:   IPR001555
- InterPro:   IPR015518 [H]

Pfam domain/function: PF02911 Formyl_trans_C; PF00551 Formyl_trans_N [H]

EC number: =2.1.2.9 [H]

Molecular weight: Translated: 31064; Mature: 30933

Theoretical pI: Translated: 9.45; Mature: 9.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTMLRFAYGCIPSVMSLYFANTLVRRAGLAPACILLSAGGLRFQKKRYTPAQVLPVFLKQ
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCEEHHCCCCHHHHHHHHHHH
FGPRFTGYNVLAGLSGSLPFSIPASGLMSFQALSQAYGIPLVISDDFSGAATVSELERHG
HCCCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHCC
VELFLTSMCDQIIREPLLSLPRHGCLNIHPSLLPEFRGVDSVFQAMLNGVSEIGTTLHRT
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
TARIDAGDVLAQSAFTRTAADSHLALTAKATAAGIALLKRHMETLERGETPDARPIDVSR
HHHCCHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHH
ARYPYRSWPEREELRRFHAQGNTFWRASDFRRLLAFEDVLAT
CCCCCCCCCCHHHHHHHHHCCCCEECHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TMLRFAYGCIPSVMSLYFANTLVRRAGLAPACILLSAGGLRFQKKRYTPAQVLPVFLKQ
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCEEHHCCCCHHHHHHHHHHH
FGPRFTGYNVLAGLSGSLPFSIPASGLMSFQALSQAYGIPLVISDDFSGAATVSELERHG
HCCCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHCC
VELFLTSMCDQIIREPLLSLPRHGCLNIHPSLLPEFRGVDSVFQAMLNGVSEIGTTLHRT
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
TARIDAGDVLAQSAFTRTAADSHLALTAKATAAGIALLKRHMETLERGETPDARPIDVSR
HHHCCHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHH
ARYPYRSWPEREELRRFHAQGNTFWRASDFRRLLAFEDVLAT
CCCCCCCCCCHHHHHHHHHCCCCEECHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA