| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is 108757359
Identifier: 108757359
GI number: 108757359
Start: 1087881
End: 1089287
Strand: Direct
Name: 108757359
Synonym: MXAN_0948
Alternate gene names: NA
Gene position: 1087881-1089287 (Clockwise)
Preceding gene: 108757787
Following gene: 108759992
Centisome position: 11.9
GC content: 72.21
Gene sequence:
>1407_bases ATGACGACGCCATGCACCAATCTGAACCTCTTCGTGGACGGAGAGCTGTCCGCTCCCGACGCGGAGGTCTTCCGCCAGCA CCTGGGGCGCTGCCCTGAATGCGAGGCGGGGCTGAGGGAGCTGCTTCAGTTGGAGCTGCTGGCCTCCCGCGCCCTGGGGG GGAGTGCCAGCGTCGCCGAGCCGCCGCCCGCGAAGGTGACGCCGCTGCGGCCGTGGATGCAGCGGATGTCTCGCACGGTG GTGCCGGTGGCGTTGGCGGCGGGTTTGGCGGCGGTGGGTGTGTTCCGTCTCCAGACGCAGCCAGAGGCCCCCACCGACGT GTGGCTGGCGGGCGCGGACGTGCGGACCTTGGAGGCGCGGCTCAGCCACCCGATGGCGGACCGCTTCCGGCCCTACGAGC CGATGCGCGGCACGTCCGGCGCCGCGAACCCGCTGCCGCTGCGGCCCCTGGCGGAGCTGGAGGAGCAGCAGGACTTCCGA GGCATCGCCGCCGCCTATGCGCTGCGCGGGGACTGGCAGCAGGCGGAGTCCTTCCTGGCACGGGCACCGGCCTCGGCGGA CCGGGACAATGACCGCGCGGTGGTGGCCCTCAGCGGTCAGCGGTGGGAGGAAGCGCTGAACCTGCTCGGCGGAGCGCTGC GCCAGGAGCCGCGGCATGCGCAGGCGCTGTGGAACCGGGGGCTGGCGCTGCGGGGACTGGGCCTGCTGAAGCAGGCGGAG ACATCGTTCCGCGACGTCGCCTCGCTGCCGGGCCAGGCGGCGGGCTGGACGGTGGCCGCGGAGAAGCGCGCGGACGAGAT GCGTGCGCTGCGTGACGCAGAGGCCGCGAGGTGGAAGCGCCAGGTGCGGGAGACGTGGACGCAGCTCACCGAGAAGACGG CGGATGCGGCGTACCTGGTGCGGCAGCATCCCGCGGTGACGCGTGCGGCCCTCTATGAAGCGGTGCGTACGGCCACTTCG GTGGACGCGGTGGCCGCACTGTTGCCGCTCGCCTCGGCGTTGGATCGGCTGGGTGAAGGCACGGTGCTCCAGGACTACGT CCGGGATGCGGCATCCCGCGACTTCAAGGTGCGTGCTCCGCTGGCGGAGGACTATGCGCAGCTGGTGAAGGAGGGGGCGC TGGTTCCCGGACTGCTGGAGCGACTGCGCGTCTCCCAGGAGACGGACCTGTACGTCGGCGCGCTGCTCCACACGGGCGAG GCCGCCCGGGATGCGGAGTCGCTCAAGGCCCTGCAGCGCTACGCCCATGGCTCCAGGGACCCGTGGCTCAACCTGCTGGC CGAGCGTGAGCGGGCCCGGAGCGAGGAGGCGTCCGGCCGCGCCGCCAACGCCGAGCACCTGCTGCTGGCCACGCTCCGCA CGTGTGGTGCGTACAACACGCTCTTCCCGTGCGCTGAAATCAACTGA
Upstream 100 bases:
>100_bases TGGGCACCGTGGGCAGTTGGCTCACCCTGGCCCGTAGGGATTTGAAGGAACTGCTGCTGCCCCAGGTGGCGGTAGCCCGG GAGCAGGGGGCCACGAGCTC
Downstream 100 bases:
>100_bases GCGCTCGCTTCGAATGACGTCACGCGGAGGCCGGCCTGTGACAGGGCCGGCCTCTTGCTTTTGTGGGCTTCGTGCAGGCG CGTGTCCGGGACCGGGCGAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 468; Mature: 467
Protein sequence:
>468_residues MTTPCTNLNLFVDGELSAPDAEVFRQHLGRCPECEAGLRELLQLELLASRALGGSASVAEPPPAKVTPLRPWMQRMSRTV VPVALAAGLAAVGVFRLQTQPEAPTDVWLAGADVRTLEARLSHPMADRFRPYEPMRGTSGAANPLPLRPLAELEEQQDFR GIAAAYALRGDWQQAESFLARAPASADRDNDRAVVALSGQRWEEALNLLGGALRQEPRHAQALWNRGLALRGLGLLKQAE TSFRDVASLPGQAAGWTVAAEKRADEMRALRDAEAARWKRQVRETWTQLTEKTADAAYLVRQHPAVTRAALYEAVRTATS VDAVAALLPLASALDRLGEGTVLQDYVRDAASRDFKVRAPLAEDYAQLVKEGALVPGLLERLRVSQETDLYVGALLHTGE AARDAESLKALQRYAHGSRDPWLNLLAERERARSEEASGRAANAEHLLLATLRTCGAYNTLFPCAEIN
Sequences:
>Translated_468_residues MTTPCTNLNLFVDGELSAPDAEVFRQHLGRCPECEAGLRELLQLELLASRALGGSASVAEPPPAKVTPLRPWMQRMSRTV VPVALAAGLAAVGVFRLQTQPEAPTDVWLAGADVRTLEARLSHPMADRFRPYEPMRGTSGAANPLPLRPLAELEEQQDFR GIAAAYALRGDWQQAESFLARAPASADRDNDRAVVALSGQRWEEALNLLGGALRQEPRHAQALWNRGLALRGLGLLKQAE TSFRDVASLPGQAAGWTVAAEKRADEMRALRDAEAARWKRQVRETWTQLTEKTADAAYLVRQHPAVTRAALYEAVRTATS VDAVAALLPLASALDRLGEGTVLQDYVRDAASRDFKVRAPLAEDYAQLVKEGALVPGLLERLRVSQETDLYVGALLHTGE AARDAESLKALQRYAHGSRDPWLNLLAERERARSEEASGRAANAEHLLLATLRTCGAYNTLFPCAEIN >Mature_467_residues TTPCTNLNLFVDGELSAPDAEVFRQHLGRCPECEAGLRELLQLELLASRALGGSASVAEPPPAKVTPLRPWMQRMSRTVV PVALAAGLAAVGVFRLQTQPEAPTDVWLAGADVRTLEARLSHPMADRFRPYEPMRGTSGAANPLPLRPLAELEEQQDFRG IAAAYALRGDWQQAESFLARAPASADRDNDRAVVALSGQRWEEALNLLGGALRQEPRHAQALWNRGLALRGLGLLKQAET SFRDVASLPGQAAGWTVAAEKRADEMRALRDAEAARWKRQVRETWTQLTEKTADAAYLVRQHPAVTRAALYEAVRTATSV DAVAALLPLASALDRLGEGTVLQDYVRDAASRDFKVRAPLAEDYAQLVKEGALVPGLLERLRVSQETDLYVGALLHTGEA ARDAESLKALQRYAHGSRDPWLNLLAERERARSEEASGRAANAEHLLLATLRTCGAYNTLFPCAEIN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 51062; Mature: 50931
Theoretical pI: Translated: 6.42; Mature: 6.42
Prosite motif: PS50293 TPR_REGION ; PS00041 HTH_ARAC_FAMILY_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTPCTNLNLFVDGELSAPDAEVFRQHLGRCPECEAGLRELLQLELLASRALGGSASVAE CCCCCCCCEEEEECCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCC PPPAKVTPLRPWMQRMSRTVVPVALAAGLAAVGVFRLQTQPEAPTDVWLAGADVRTLEAR CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCHHHHHHH LSHPMADRFRPYEPMRGTSGAANPLPLRPLAELEEQQDFRGIAAAYALRGDWQQAESFLA HCCCHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH RAPASADRDNDRAVVALSGQRWEEALNLLGGALRQEPRHAQALWNRGLALRGLGLLKQAE HCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHH TSFRDVASLPGQAAGWTVAAEKRADEMRALRDAEAARWKRQVRETWTQLTEKTADAAYLV HHHHHHHHCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RQHPAVTRAALYEAVRTATSVDAVAALLPLASALDRLGEGTVLQDYVRDAASRDFKVRAP HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCEEECC LAEDYAQLVKEGALVPGLLERLRVSQETDLYVGALLHTGEAARDAESLKALQRYAHGSRD HHHHHHHHHHCCCCCHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCC PWLNLLAERERARSEEASGRAANAEHLLLATLRTCGAYNTLFPCAEIN HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHCCCCCCCC >Mature Secondary Structure TTPCTNLNLFVDGELSAPDAEVFRQHLGRCPECEAGLRELLQLELLASRALGGSASVAE CCCCCCCEEEEECCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCC PPPAKVTPLRPWMQRMSRTVVPVALAAGLAAVGVFRLQTQPEAPTDVWLAGADVRTLEAR CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCHHHHHHH LSHPMADRFRPYEPMRGTSGAANPLPLRPLAELEEQQDFRGIAAAYALRGDWQQAESFLA HCCCHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH RAPASADRDNDRAVVALSGQRWEEALNLLGGALRQEPRHAQALWNRGLALRGLGLLKQAE HCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHH TSFRDVASLPGQAAGWTVAAEKRADEMRALRDAEAARWKRQVRETWTQLTEKTADAAYLV HHHHHHHHCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RQHPAVTRAALYEAVRTATSVDAVAALLPLASALDRLGEGTVLQDYVRDAASRDFKVRAP HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCEEECC LAEDYAQLVKEGALVPGLLERLRVSQETDLYVGALLHTGEAARDAESLKALQRYAHGSRD HHHHHHHHHHCCCCCHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCC PWLNLLAERERARSEEASGRAANAEHLLLATLRTCGAYNTLFPCAEIN HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA