| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
Click here to switch to the map view.
The map label for this gene is hetM [H]
Identifier: 108757742
GI number: 108757742
Start: 3546856
End: 3547998
Strand: Reverse
Name: hetM [H]
Synonym: MXAN_3020
Alternate gene names: 108757742
Gene position: 3547998-3546856 (Counterclockwise)
Preceding gene: 108758833
Following gene: 108757231
Centisome position: 38.82
GC content: 68.42
Gene sequence:
>1143_bases ATGAGCGAGACGCGCAAGAAGGCCACGGCCGGAACGTACTTCATCACCGGCTACCCGGGATTCATCGGCAAGCGGCTGGT GGAACACATCGCCCGCGAGGACCCGAAGGGGCACATCTACGCGCTGGTGCAGCCCAAGTCGTTCAAGGAAGCGCAGCAGC ACGCCGCCCGCGTGAAGGGCGCCAAGGTGGAGCTGCTCACCGGCGATGTGGTGGACATGCACCTGGGCCTGTCGGGCGAG GAGTACCAGCGCCTGTGCGAGCGGGTGACGGACATCTTCCACCTGGCGGCGGTGGCCCAGTTGGGCGTGGCCAAGGAGAC GGCCTGGCGGGTGAACGTGGACGGCACCCGCAACATGCTGGAGCTGGCTCGGGACTGCGGGAAGCTCACGCGCTTCAACT ACTTCTCCACCTGCTACGTGTCCGGCGACCGCCTGGGCGTCATCGCCGAGGACGAGCTGGACCGGGGCCAGGGCTTCCGC AACGCCTACGAGGAGACGAAGTTCCAGGCGGAGCGGCTGGTGCAGCGCGCGGCTGCCACCGTGCCCATCACCGTCTTCCG TCCGTCCAGCGTGGTGGGCGACTCCCGCACGGGGGAGATCGACCGCTTCGAGGGGCCCTACTACCTGGGCATCCTCCTGG TCACCTCGCCGCTGGTGGTGCCCCTGCCCCTGCCGGGCAATGGCGTGGCGCCGCTCAACGTGGTGCCGGTGGACTACGTG GTGGAGGCGGTGTGGCGCCTGTCGAAGGACCCGCGCGCCCAGGGCAACACCTTCCACCTGGTGGACCCCAACCCGATGAG CGCGCGCCGCGTGTACGAGCTCATCGCGGAGAAGTCGAACAAGAAGCTGCCGCGCTTCAACCTCTCCGCGCGCGCGGCGG ACGTCATGCTGCGGCTGCCGCTGCTGGAGAAGCTGGCCCGCCCCCAGCGCGCCGCCATCAGCTACGTCAACCACCTGGCC ATCTACAACTGCCACAACACGCTGGAGCTGCTGGACGGCACCGGCGTGCGGTGCCCTCCCCTATCATCCTATCTGGATCA GCTCGTGGCCTACGTGCGGGACCAGTACCGCAAGCGCCGTGAGGGCTCGGACGAATACGACCCGTTGGATCAGGGCACGG CACCCGACGCGGAGCGTCCCTGA
Upstream 100 bases:
>100_bases TCGACAACAGTGGGGACCTGGCCTCCACCCGCGCCCAGGTTGAAGCGATGTGGCGCGCCATGCTCGCGCGCGGCTGAGCG CCGGGTATGCTGCGCGCCGC
Downstream 100 bases:
>100_bases GCACGCGCGGCGGCCAGCCGTGGTAGATCGACGGTTCCCATGCCACGCACCTACCAGCCAGGCGACACGTTCACGCACGT CCGCGAGTGCGACCGGTACC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 380; Mature: 379
Protein sequence:
>380_residues MSETRKKATAGTYFITGYPGFIGKRLVEHIAREDPKGHIYALVQPKSFKEAQQHAARVKGAKVELLTGDVVDMHLGLSGE EYQRLCERVTDIFHLAAVAQLGVAKETAWRVNVDGTRNMLELARDCGKLTRFNYFSTCYVSGDRLGVIAEDELDRGQGFR NAYEETKFQAERLVQRAAATVPITVFRPSSVVGDSRTGEIDRFEGPYYLGILLVTSPLVVPLPLPGNGVAPLNVVPVDYV VEAVWRLSKDPRAQGNTFHLVDPNPMSARRVYELIAEKSNKKLPRFNLSARAADVMLRLPLLEKLARPQRAAISYVNHLA IYNCHNTLELLDGTGVRCPPLSSYLDQLVAYVRDQYRKRREGSDEYDPLDQGTAPDAERP
Sequences:
>Translated_380_residues MSETRKKATAGTYFITGYPGFIGKRLVEHIAREDPKGHIYALVQPKSFKEAQQHAARVKGAKVELLTGDVVDMHLGLSGE EYQRLCERVTDIFHLAAVAQLGVAKETAWRVNVDGTRNMLELARDCGKLTRFNYFSTCYVSGDRLGVIAEDELDRGQGFR NAYEETKFQAERLVQRAAATVPITVFRPSSVVGDSRTGEIDRFEGPYYLGILLVTSPLVVPLPLPGNGVAPLNVVPVDYV VEAVWRLSKDPRAQGNTFHLVDPNPMSARRVYELIAEKSNKKLPRFNLSARAADVMLRLPLLEKLARPQRAAISYVNHLA IYNCHNTLELLDGTGVRCPPLSSYLDQLVAYVRDQYRKRREGSDEYDPLDQGTAPDAERP >Mature_379_residues SETRKKATAGTYFITGYPGFIGKRLVEHIAREDPKGHIYALVQPKSFKEAQQHAARVKGAKVELLTGDVVDMHLGLSGEE YQRLCERVTDIFHLAAVAQLGVAKETAWRVNVDGTRNMLELARDCGKLTRFNYFSTCYVSGDRLGVIAEDELDRGQGFRN AYEETKFQAERLVQRAAATVPITVFRPSSVVGDSRTGEIDRFEGPYYLGILLVTSPLVVPLPLPGNGVAPLNVVPVDYVV EAVWRLSKDPRAQGNTFHLVDPNPMSARRVYELIAEKSNKKLPRFNLSARAADVMLRLPLLEKLARPQRAAISYVNHLAI YNCHNTLELLDGTGVRCPPLSSYLDQLVAYVRDQYRKRREGSDEYDPLDQGTAPDAERP
Specific function: Unknown
COG id: COG3320
COG function: function code Q; Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 acyl carrier domain [H]
Homologues:
Organism=Drosophila melanogaster, GI281361942, Length=292, Percent_Identity=27.7397260273973, Blast_Score=94, Evalue=2e-19, Organism=Drosophila melanogaster, GI281363511, Length=283, Percent_Identity=28.9752650176678, Blast_Score=93, Evalue=2e-19, Organism=Drosophila melanogaster, GI281363509, Length=283, Percent_Identity=28.9752650176678, Blast_Score=93, Evalue=2e-19, Organism=Drosophila melanogaster, GI24654209, Length=283, Percent_Identity=28.9752650176678, Blast_Score=93, Evalue=2e-19, Organism=Drosophila melanogaster, GI28572029, Length=284, Percent_Identity=27.112676056338, Blast_Score=92, Evalue=5e-19, Organism=Drosophila melanogaster, GI24648302, Length=277, Percent_Identity=29.9638989169675, Blast_Score=89, Evalue=5e-18, Organism=Drosophila melanogaster, GI24647492, Length=300, Percent_Identity=26, Blast_Score=86, Evalue=5e-17, Organism=Drosophila melanogaster, GI221330327, Length=330, Percent_Identity=23.9393939393939, Blast_Score=80, Evalue=2e-15, Organism=Drosophila melanogaster, GI24640000, Length=237, Percent_Identity=30.379746835443, Blast_Score=78, Evalue=1e-14, Organism=Drosophila melanogaster, GI78706760, Length=288, Percent_Identity=26.0416666666667, Blast_Score=76, Evalue=4e-14, Organism=Drosophila melanogaster, GI28573762, Length=343, Percent_Identity=24.4897959183673, Blast_Score=71, Evalue=1e-12, Organism=Drosophila melanogaster, GI20129837, Length=288, Percent_Identity=26.7361111111111, Blast_Score=69, Evalue=6e-12, Organism=Drosophila melanogaster, GI24652250, Length=288, Percent_Identity=26.7361111111111, Blast_Score=69, Evalue=6e-12, Organism=Drosophila melanogaster, GI24639308, Length=220, Percent_Identity=29.0909090909091, Blast_Score=67, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009081 - InterPro: IPR013120 - InterPro: IPR016040 - InterPro: IPR006163 - InterPro: IPR010080 [H]
Pfam domain/function: PF07993 NAD_binding_4; PF00550 PP-binding [H]
EC number: NA
Molecular weight: Translated: 42459; Mature: 42328
Theoretical pI: Translated: 8.42; Mature: 8.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSETRKKATAGTYFITGYPGFIGKRLVEHIAREDPKGHIYALVQPKSFKEAQQHAARVKG CCCHHHHHCCCEEEEECCCHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHHHCC AKVELLTGDVVDMHLGLSGEEYQRLCERVTDIFHLAAVAQLGVAKETAWRVNVDGTRNML CEEEEEECCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHH ELARDCGKLTRFNYFSTCYVSGDRLGVIAEDELDRGQGFRNAYEETKFQAERLVQRAAAT HHHHHHHHHHHCCCEEEEEECCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC VPITVFRPSSVVGDSRTGEIDRFEGPYYLGILLVTSPLVVPLPLPGNGVAPLNVVPVDYV CEEEEECCCCCCCCCCCCCCCCCCCCEEEEHHHHHCCCEEEECCCCCCCCCCEECCHHHH VEAVWRLSKDPRAQGNTFHLVDPNPMSARRVYELIAEKSNKKLPRFNLSARAADVMLRLP HHHHHHCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHH LLEKLARPQRAAISYVNHLAIYNCHNTLELLDGTGVRCPPLSSYLDQLVAYVRDQYRKRR HHHHHCCCHHHHHHHHHHHHEEECCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHH EGSDEYDPLDQGTAPDAERP CCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure SETRKKATAGTYFITGYPGFIGKRLVEHIAREDPKGHIYALVQPKSFKEAQQHAARVKG CCHHHHHCCCEEEEECCCHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHHHCC AKVELLTGDVVDMHLGLSGEEYQRLCERVTDIFHLAAVAQLGVAKETAWRVNVDGTRNML CEEEEEECCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHH ELARDCGKLTRFNYFSTCYVSGDRLGVIAEDELDRGQGFRNAYEETKFQAERLVQRAAAT HHHHHHHHHHHCCCEEEEEECCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC VPITVFRPSSVVGDSRTGEIDRFEGPYYLGILLVTSPLVVPLPLPGNGVAPLNVVPVDYV CEEEEECCCCCCCCCCCCCCCCCCCCEEEEHHHHHCCCEEEECCCCCCCCCCEECCHHHH VEAVWRLSKDPRAQGNTFHLVDPNPMSARRVYELIAEKSNKKLPRFNLSARAADVMLRLP HHHHHHCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHH LLEKLARPQRAAISYVNHLAIYNCHNTLELLDGTGVRCPPLSSYLDQLVAYVRDQYRKRR HHHHHCCCHHHHHHHHHHHHEEECCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHH EGSDEYDPLDQGTAPDAERP CCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8157596; 11759840 [H]