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The map label for this gene is secY [H]

Identifier: 108757580

GI number: 108757580

Start: 3864355

End: 3865701

Strand: Direct

Name: secY [H]

Synonym: MXAN_3319

Alternate gene names: 108757580

Gene position: 3864355-3865701 (Clockwise)

Preceding gene: 108758655

Following gene: 108762648

Centisome position: 42.28

GC content: 64.96

Gene sequence:

>1347_bases
GTGGCTCTGAACGCCTTCGCCAACGTCTTCCGTATCGCTGAGCTGCGCAGTCGGCTCGCGTATACGCTCGCGCTGCTCGC
CGTCTATCGCATCGGCATCTTCATCAACACGCCAGGCGTGGACCGTTCGGCGATGAACGCGTTCATGGACGCCCAGAAGC
AGTCGGGCGGCCTCGTCTCGCTGTTCAACCTCTTCTCCGGCGGCGCGCTGGAGCAGATGTCCATCTTCGGATTGGGCATC
ATGCCGTACGTCAGCGCCTCCATCATCATGCAGCTGCTCGCCGTGGTCGTACCCAGCCTGGAGCGGCTGCAGAAGGAAGG
CGCCGGCGGCCGGCAGAAGATCAACCAGTACACCCGCTACGGCACGATCGCGCTCTCCGTCGTGCAGGGCATCGGCATCT
CGCGGTGGCTGGCGTCGCTGGGCCGCTCCGACGGTGGCCAGAGCGGCTTCAACCAGGTGGTCGTCCCCGATGACAGCGTC
TGGTTCACCTTCATGACGGTGGTCAGCCTCACGGCCGGAACGGCCTTCATCATGTGGCTGGGTGAGCGCATCACCGAGCG
TGGCATCGGCAACGGCATCTCGCTCATCATCTTCGCCGGTATCGTGGCGGGCCTGCTCCCGGGCGCGAAGCAGTTGCTGG
ACCTGACCCGTCAGGACGTCATCTCGATGGCCGAGGTGCTCGCGCTGGTCGTCTTCATGCTCATCATCATCGCCGCGGTC
GTCTACGTGGAGCGAGGCATGCGGCGCATCCCCATCCAGTACGCCAAGCGGATGGCGGGACGGCGGATGTTCGCCGGCCA
GGCGACGTACTTCCCGATGAAGGTGAACACCTCGGGCGTGATTCCTCCCATCTTCGCGGGCGCCGTGCTGTCCTTCCCGG
CCACGCTGGGAACCTGGTTCCCGTTCCTGCAGGGATTCCAGCGCGCCATCGAAGGCAACCTGTGGATCTACAACGGGCTG
TTCGTCGTGATGGTCATCTTCTTCGCCTACTTCTATACGGCGCTGACGTTCCGGCCGGACGACGTGGCGGACAACATCAA
GAAGCAGGGTGGCTACATCCCGGGCATCCGTCCGGGCCGTCAGACGGCGGAGTTCATCGAGCGCGTGCTCAACCGGCTCA
CGTTCGGTGGTGCCATCTACCTGTCGATTGTCTGCGTGATTCCGTCGGTCATCAGTGGCTTGCTGGGGGTGCGGTTCACC
TTCGGCGGCACGGCGCTGCTGATCGTCGTGGGCGTAGCGCTGGATACGGTGCAGCAGATTGAGGGCCACCTCATCAGTCG
TAACTACGAGGGCTTCGCCGGCCCTCGCGGCCCGCGCATCCGGGGCCGGGTGCGCGTGGCGGCCTGA

Upstream 100 bases:

>100_bases
CGCAGTTTCGCTTGTGTAGGCTTCTGCGCCCCTTTCCCACTCGTGGAACAGGGGCGTTTTGTCGTCCTGGCAGAACCCTC
TCGAAGAGGATGGCTACCCC

Downstream 100 bases:

>100_bases
GCCTCCGCGCGGGCGTTCCGGGCGCCTCTCCCCGTCGCGGGGAGGGGCGCCTCGTCGTTCCCAGGCTAGGTGTTGTTCAA
GGATATTCGCTGGTGCACAC

Product: preprotein translocase subunit SecY

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 448; Mature: 447

Protein sequence:

>448_residues
MALNAFANVFRIAELRSRLAYTLALLAVYRIGIFINTPGVDRSAMNAFMDAQKQSGGLVSLFNLFSGGALEQMSIFGLGI
MPYVSASIIMQLLAVVVPSLERLQKEGAGGRQKINQYTRYGTIALSVVQGIGISRWLASLGRSDGGQSGFNQVVVPDDSV
WFTFMTVVSLTAGTAFIMWLGERITERGIGNGISLIIFAGIVAGLLPGAKQLLDLTRQDVISMAEVLALVVFMLIIIAAV
VYVERGMRRIPIQYAKRMAGRRMFAGQATYFPMKVNTSGVIPPIFAGAVLSFPATLGTWFPFLQGFQRAIEGNLWIYNGL
FVVMVIFFAYFYTALTFRPDDVADNIKKQGGYIPGIRPGRQTAEFIERVLNRLTFGGAIYLSIVCVIPSVISGLLGVRFT
FGGTALLIVVGVALDTVQQIEGHLISRNYEGFAGPRGPRIRGRVRVAA

Sequences:

>Translated_448_residues
MALNAFANVFRIAELRSRLAYTLALLAVYRIGIFINTPGVDRSAMNAFMDAQKQSGGLVSLFNLFSGGALEQMSIFGLGI
MPYVSASIIMQLLAVVVPSLERLQKEGAGGRQKINQYTRYGTIALSVVQGIGISRWLASLGRSDGGQSGFNQVVVPDDSV
WFTFMTVVSLTAGTAFIMWLGERITERGIGNGISLIIFAGIVAGLLPGAKQLLDLTRQDVISMAEVLALVVFMLIIIAAV
VYVERGMRRIPIQYAKRMAGRRMFAGQATYFPMKVNTSGVIPPIFAGAVLSFPATLGTWFPFLQGFQRAIEGNLWIYNGL
FVVMVIFFAYFYTALTFRPDDVADNIKKQGGYIPGIRPGRQTAEFIERVLNRLTFGGAIYLSIVCVIPSVISGLLGVRFT
FGGTALLIVVGVALDTVQQIEGHLISRNYEGFAGPRGPRIRGRVRVAA
>Mature_447_residues
ALNAFANVFRIAELRSRLAYTLALLAVYRIGIFINTPGVDRSAMNAFMDAQKQSGGLVSLFNLFSGGALEQMSIFGLGIM
PYVSASIIMQLLAVVVPSLERLQKEGAGGRQKINQYTRYGTIALSVVQGIGISRWLASLGRSDGGQSGFNQVVVPDDSVW
FTFMTVVSLTAGTAFIMWLGERITERGIGNGISLIIFAGIVAGLLPGAKQLLDLTRQDVISMAEVLALVVFMLIIIAAVV
YVERGMRRIPIQYAKRMAGRRMFAGQATYFPMKVNTSGVIPPIFAGAVLSFPATLGTWFPFLQGFQRAIEGNLWIYNGLF
VVMVIFFAYFYTALTFRPDDVADNIKKQGGYIPGIRPGRQTAEFIERVLNRLTFGGAIYLSIVCVIPSVISGLLGVRFTF
GGTALLIVVGVALDTVQQIEGHLISRNYEGFAGPRGPRIRGRVRVAA

Specific function: Involved in protein export. Interacts with secA and secE to allow the translocation of proteins across the plasma membrane, by forming part of a channel [H]

COG id: COG0201

COG function: function code U; Preprotein translocase subunit SecY

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the secY/SEC61-alpha family [H]

Homologues:

Organism=Escherichia coli, GI1789696, Length=425, Percent_Identity=47.0588235294118, Blast_Score=356, Evalue=2e-99,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002208
- InterPro:   IPR023201 [H]

Pfam domain/function: PF00344 SecY [H]

EC number: NA

Molecular weight: Translated: 48711; Mature: 48580

Theoretical pI: Translated: 10.59; Mature: 10.59

Prosite motif: PS00755 SECY_1 ; PS00756 SECY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALNAFANVFRIAELRSRLAYTLALLAVYRIGIFINTPGVDRSAMNAFMDAQKQSGGLVS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHCCCCHHH
LFNLFSGGALEQMSIFGLGIMPYVSASIIMQLLAVVVPSLERLQKEGAGGRQKINQYTRY
HHHHHCCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
GTIALSVVQGIGISRWLASLGRSDGGQSGFNQVVVPDDSVWFTFMTVVSLTAGTAFIMWL
HHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHH
GERITERGIGNGISLIIFAGIVAGLLPGAKQLLDLTRQDVISMAEVLALVVFMLIIIAAV
HHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VYVERGMRRIPIQYAKRMAGRRMFAGQATYFPMKVNTSGVIPPIFAGAVLSFPATLGTWF
HHHHHCCCCCCHHHHHHHHCCCEECCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHH
PFLQGFQRAIEGNLWIYNGLFVVMVIFFAYFYTALTFRPDDVADNIKKQGGYIPGIRPGR
HHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCH
QTAEFIERVLNRLTFGGAIYLSIVCVIPSVISGLLGVRFTFGGTALLIVVGVALDTVQQI
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
EGHLISRNYEGFAGPRGPRIRGRVRVAA
HHHHHCCCCCCCCCCCCCCCCCCEEECC
>Mature Secondary Structure 
ALNAFANVFRIAELRSRLAYTLALLAVYRIGIFINTPGVDRSAMNAFMDAQKQSGGLVS
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHCCCCHHH
LFNLFSGGALEQMSIFGLGIMPYVSASIIMQLLAVVVPSLERLQKEGAGGRQKINQYTRY
HHHHHCCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
GTIALSVVQGIGISRWLASLGRSDGGQSGFNQVVVPDDSVWFTFMTVVSLTAGTAFIMWL
HHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHH
GERITERGIGNGISLIIFAGIVAGLLPGAKQLLDLTRQDVISMAEVLALVVFMLIIIAAV
HHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VYVERGMRRIPIQYAKRMAGRRMFAGQATYFPMKVNTSGVIPPIFAGAVLSFPATLGTWF
HHHHHCCCCCCHHHHHHHHCCCEECCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHH
PFLQGFQRAIEGNLWIYNGLFVVMVIFFAYFYTALTFRPDDVADNIKKQGGYIPGIRPGR
HHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCH
QTAEFIERVLNRLTFGGAIYLSIVCVIPSVISGLLGVRFTFGGTALLIVVGVALDTVQQI
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
EGHLISRNYEGFAGPRGPRIRGRVRVAA
HHHHHCCCCCCCCCCCCCCCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9322765; 10952301 [H]