| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is 108757572
Identifier: 108757572
GI number: 108757572
Start: 3948394
End: 3949314
Strand: Direct
Name: 108757572
Synonym: MXAN_3397
Alternate gene names: NA
Gene position: 3948394-3949314 (Clockwise)
Preceding gene: 108759554
Following gene: 108764014
Centisome position: 43.2
GC content: 67.21
Gene sequence:
>921_bases ATGCGCACATCCTGGCCCAGCAGGGGCCTTTCGTCGCGTGTCTCGTCCATGCCCAGGATAGTGTCCGTGTCGATGCTCAC TGAAGTCCAGGCAGGTCCCTACACCGTCCGAGGCGTGTCCGTGGGCGGCGTGTACACGTCGCTCCAGGTCCCCGAACTGG ACGTAGTGCTCGACGTGGGGCTACCCATTCGCTCCTTCTGTGGCTCGGACCGCATCTTCTTGAGCCACGCGCACCCGGAC CATGCCAGCGGGCTCGGCTCGCTGCTCGGCATCCGTCGGCTCATCGGCAAGGGGGCACCCCAGGTCTTCCTGCCCGCGGA GATCGAGGAGAACGTCCAGGCGTCGCTCGCCGTGATGTCGCGGCTGCACCACACCTCCATGGAGGTGCACACCGTGCCGA TGTTGCCAGGGGACGTGCGGCCCCTGGGGCAAGGTCTGTTCGTTCGCGCATTCCGGACGCATCACCCGGTGCCGTCGCTC GGCTACCAGTTCTTTCGCCGTGTCGCGAAGCTCCGGCTCGAGCACCAGTCACTCCCGCCTCAGGAAATCGCCAGGCGGCG GCAAGCAGGCGAAGCGCTCTTCGACGAAGTGGAGCGGCTGGAGTTGGCCTATGCCACCGATACCCTGTCCCGCGTCCTGG ACACGGAGCCAGGCCTCTTCGACTCGCGCGTGCTCATCCTCGAGTGCACCTTCGTCGACGCGCGCCACTCCGTGCAGGAC GCTCAGGCGAAGGCGCATCTCCACGTGGACGAACTCCTCGCGCGCGCGGACCAGTTCCGCAACGAGGCCCTGGTCCTGAT GCACTTCAGCCAGGCGCTTCCTCCTGAATCCGTCCACGCCACGTTGCGCGCGCGACTGCCGCCGTCGCTGGCCGAACGCG TCCGCGTCTTCGCTCCCGAAGCGGGCCGTTGGTTCGGGTGA
Upstream 100 bases:
>100_bases GTTCTTGGTGCCGCAGCCGTAGCAGATGCCTTCTGGCGCGACGACTTCTTGGAGAGATGAGGTTTCCATGTGGGGCCCTG ACTGCAAGGGAGGCGCAACG
Downstream 100 bases:
>100_bases GCCGTGCCCGTGAAGTACGTGTCAGAGCGCCAGACCCCGTATGGCAACTCCGCGGCGGTGGTGCAGCAGTGACCTCCCGT CACTGTGTTGCACATGAATC
Product: ribonuclease Z family protein
Products: NA
Alternate protein names: Ribonuclease Z Family Protein; Metallo-Hydrolase/Oxidoreductase; Metallo-Beta-Lactamase Superfamily Protein
Number of amino acids: Translated: 306; Mature: 306
Protein sequence:
>306_residues MRTSWPSRGLSSRVSSMPRIVSVSMLTEVQAGPYTVRGVSVGGVYTSLQVPELDVVLDVGLPIRSFCGSDRIFLSHAHPD HASGLGSLLGIRRLIGKGAPQVFLPAEIEENVQASLAVMSRLHHTSMEVHTVPMLPGDVRPLGQGLFVRAFRTHHPVPSL GYQFFRRVAKLRLEHQSLPPQEIARRRQAGEALFDEVERLELAYATDTLSRVLDTEPGLFDSRVLILECTFVDARHSVQD AQAKAHLHVDELLARADQFRNEALVLMHFSQALPPESVHATLRARLPPSLAERVRVFAPEAGRWFG
Sequences:
>Translated_306_residues MRTSWPSRGLSSRVSSMPRIVSVSMLTEVQAGPYTVRGVSVGGVYTSLQVPELDVVLDVGLPIRSFCGSDRIFLSHAHPD HASGLGSLLGIRRLIGKGAPQVFLPAEIEENVQASLAVMSRLHHTSMEVHTVPMLPGDVRPLGQGLFVRAFRTHHPVPSL GYQFFRRVAKLRLEHQSLPPQEIARRRQAGEALFDEVERLELAYATDTLSRVLDTEPGLFDSRVLILECTFVDARHSVQD AQAKAHLHVDELLARADQFRNEALVLMHFSQALPPESVHATLRARLPPSLAERVRVFAPEAGRWFG >Mature_306_residues MRTSWPSRGLSSRVSSMPRIVSVSMLTEVQAGPYTVRGVSVGGVYTSLQVPELDVVLDVGLPIRSFCGSDRIFLSHAHPD HASGLGSLLGIRRLIGKGAPQVFLPAEIEENVQASLAVMSRLHHTSMEVHTVPMLPGDVRPLGQGLFVRAFRTHHPVPSL GYQFFRRVAKLRLEHQSLPPQEIARRRQAGEALFDEVERLELAYATDTLSRVLDTEPGLFDSRVLILECTFVDARHSVQD AQAKAHLHVDELLARADQFRNEALVLMHFSQALPPESVHATLRARLPPSLAERVRVFAPEAGRWFG
Specific function: Unknown
COG id: COG1234
COG function: function code R; Metal-dependent hydrolases of the beta-lactamase superfamily III
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33917; Mature: 33917
Theoretical pI: Translated: 8.32; Mature: 8.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRTSWPSRGLSSRVSSMPRIVSVSMLTEVQAGPYTVRGVSVGGVYTSLQVPELDVVLDVG CCCCCCCCCHHHHHHHCCHHHHHHHHHHHCCCCEEEEEEEECCEEEEECCCCEEEEEECC LPIRSFCGSDRIFLSHAHPDHASGLGSLLGIRRLIGKGAPQVFLPAEIEENVQASLAVMS CCHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHHCCCCCCEEECHHHHHHHHHHHHHHH RLHHTSMEVHTVPMLPGDVRPLGQGLFVRAFRTHHPVPSLGYQFFRRVAKLRLEHQSLPP HHHHCCCEEEEECCCCCCCCHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCH QEIARRRQAGEALFDEVERLELAYATDTLSRVLDTEPGLFDSRVLILECTFVDARHSVQD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEEECCHHHHHH AQAKAHLHVDELLARADQFRNEALVLMHFSQALPPESVHATLRARLPPSLAERVRVFAPE HHHHHHCCHHHHHHHHHHHCCCEEEEEEHHHCCCCHHHHHHHHHCCCHHHHHHHHHCCCC AGRWFG CCCCCC >Mature Secondary Structure MRTSWPSRGLSSRVSSMPRIVSVSMLTEVQAGPYTVRGVSVGGVYTSLQVPELDVVLDVG CCCCCCCCCHHHHHHHCCHHHHHHHHHHHCCCCEEEEEEEECCEEEEECCCCEEEEEECC LPIRSFCGSDRIFLSHAHPDHASGLGSLLGIRRLIGKGAPQVFLPAEIEENVQASLAVMS CCHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHHCCCCCCEEECHHHHHHHHHHHHHHH RLHHTSMEVHTVPMLPGDVRPLGQGLFVRAFRTHHPVPSLGYQFFRRVAKLRLEHQSLPP HHHHCCCEEEEECCCCCCCCHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCH QEIARRRQAGEALFDEVERLELAYATDTLSRVLDTEPGLFDSRVLILECTFVDARHSVQD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEEECCHHHHHH AQAKAHLHVDELLARADQFRNEALVLMHFSQALPPESVHATLRARLPPSLAERVRVFAPE HHHHHHCCHHHHHHHHHHHCCCEEEEEEHHHCCCCHHHHHHHHHCCCHHHHHHHHHCCCC AGRWFG CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA