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The map label for this gene is 108757500

Identifier: 108757500

GI number: 108757500

Start: 2862800

End: 2863492

Strand: Direct

Name: 108757500

Synonym: MXAN_2461

Alternate gene names: NA

Gene position: 2862800-2863492 (Clockwise)

Preceding gene: 108763960

Following gene: 108757145

Centisome position: 31.32

GC content: 66.09

Gene sequence:

>693_bases
GTGGTTTGCGGCGGCGCTGCTTACAAAAGGATTATGGGGGAATGGGGGGCAGAAGTTTCCTCCCCATTTTCTGATCCATT
TTTTCGCGCCGGCGGCGCGAATATCGCTTCCGAAGCGGCGCACCGTTTTGGTGGAAAAGCCGATAACAGTCTAAGCTCCC
GGCGCCCGGAACCGCTTGCCCTACCGGCTCCGGGGCCGTCCTCCCGCCCTCGTGAGGGATGTGTGCAGATGACGACTGAA
TCCAAGGCAACGGTGACCAACGACGACGTGAAGCCCCTGTCCGGCCCGGAGATGCTCGAACGGGCCACGGAAGGCTTCAA
CCTCTTCCAGGACGGCCGCTTCCGTGAGTCGCTGACCTTGTTCCAGTCCCTGGCGGCCATGGACCCCACCGAGGCCTACT
TCCAGACGGCGCTGGGCGCCTGCCACCTGGCGCTGGAAGACCTGGACCTGGCCGAGTCCTACTTCAACCGCGCCATCGAG
CTGGACCCCTCCGACCTCACGCCCTTCGTCAACCGCGGGGAAGTACACCTGCGGCTCGGCAAGGTCCACGAGGCCGCCCG
GGACTTCAATCATGCGGTGGGGCTGGATCCCGAAGGACAGGATCCGCTCAGCGCCCGGGCCCGGATGCTGGCCGCCGCGG
CGCTGGAGAGCGCCGAGGGGGCGCCGTCTTCCGAATCCGACGGCGCGGCGTAG

Upstream 100 bases:

>100_bases
AGGGCGGAGAGACCCTGGCTGGCTCCGAGGGCCTTCGTGGCGGCGGCGGCGGCGGTGGTGGCGGTGGTCATTTGCGTTCT
CCAGAAAGTTTGGGAAGCGG

Downstream 100 bases:

>100_bases
GCGCGGGCGGGGCCACTCGAAGGCCCCGGCCCGCCTTCCCTGGCCCTTGGGCTCAGGGGAACTTCAGCTCCACGTCCAGG
CGGTACAACCCCTCCATGAC

Product: TPR repeat-containing protein

Products: NA

Alternate protein names: Tetratricopeptide Repeat Protein; Type III Secretion Low Calcium Response Chaperone LcrH/SycD; Type III Secretion Low Calcium Response Chaperone Lcrh/Sycd

Number of amino acids: Translated: 230; Mature: 230

Protein sequence:

>230_residues
MVCGGAAYKRIMGEWGAEVSSPFSDPFFRAGGANIASEAAHRFGGKADNSLSSRRPEPLALPAPGPSSRPREGCVQMTTE
SKATVTNDDVKPLSGPEMLERATEGFNLFQDGRFRESLTLFQSLAAMDPTEAYFQTALGACHLALEDLDLAESYFNRAIE
LDPSDLTPFVNRGEVHLRLGKVHEAARDFNHAVGLDPEGQDPLSARARMLAAAALESAEGAPSSESDGAA

Sequences:

>Translated_230_residues
MVCGGAAYKRIMGEWGAEVSSPFSDPFFRAGGANIASEAAHRFGGKADNSLSSRRPEPLALPAPGPSSRPREGCVQMTTE
SKATVTNDDVKPLSGPEMLERATEGFNLFQDGRFRESLTLFQSLAAMDPTEAYFQTALGACHLALEDLDLAESYFNRAIE
LDPSDLTPFVNRGEVHLRLGKVHEAARDFNHAVGLDPEGQDPLSARARMLAAAALESAEGAPSSESDGAA
>Mature_230_residues
MVCGGAAYKRIMGEWGAEVSSPFSDPFFRAGGANIASEAAHRFGGKADNSLSSRRPEPLALPAPGPSSRPREGCVQMTTE
SKATVTNDDVKPLSGPEMLERATEGFNLFQDGRFRESLTLFQSLAAMDPTEAYFQTALGACHLALEDLDLAESYFNRAIE
LDPSDLTPFVNRGEVHLRLGKVHEAARDFNHAVGLDPEGQDPLSARARMLAAAALESAEGAPSSESDGAA

Specific function: Unknown

COG id: COG0457

COG function: function code R; FOG: TPR repeat

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24499; Mature: 24499

Theoretical pI: Translated: 4.54; Mature: 4.54

Prosite motif: PS50005 TPR L=RR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVCGGAAYKRIMGEWGAEVSSPFSDPFFRAGGANIASEAAHRFGGKADNSLSSRRPEPLA
CCCCHHHHHHHHHHHCCHHCCCCCCCHHHCCCCCHHHHHHHHCCCCCCCCHHHCCCCCEE
LPAPGPSSRPREGCVQMTTESKATVTNDDVKPLSGPEMLERATEGFNLFQDGRFRESLTL
CCCCCCCCCCHHHHHEECCCCCCEECCCCCCCCCCHHHHHHHHHHCCHHCCCCHHHHHHH
FQSLAAMDPTEAYFQTALGACHLALEDLDLAESYFNRAIELDPSDLTPFVNRGEVHLRLG
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCEEEEEHH
KVHEAARDFNHAVGLDPEGQDPLSARARMLAAAALESAEGAPSSESDGAA
HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MVCGGAAYKRIMGEWGAEVSSPFSDPFFRAGGANIASEAAHRFGGKADNSLSSRRPEPLA
CCCCHHHHHHHHHHHCCHHCCCCCCCHHHCCCCCHHHHHHHHCCCCCCCCHHHCCCCCEE
LPAPGPSSRPREGCVQMTTESKATVTNDDVKPLSGPEMLERATEGFNLFQDGRFRESLTL
CCCCCCCCCCHHHHHEECCCCCCEECCCCCCCCCCHHHHHHHHHHCCHHCCCCHHHHHHH
FQSLAAMDPTEAYFQTALGACHLALEDLDLAESYFNRAIELDPSDLTPFVNRGEVHLRLG
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCEEEEEHH
KVHEAARDFNHAVGLDPEGQDPLSARARMLAAAALESAEGAPSSESDGAA
HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA