| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is 108757335
Identifier: 108757335
GI number: 108757335
Start: 2643182
End: 2644825
Strand: Reverse
Name: 108757335
Synonym: MXAN_2277
Alternate gene names: NA
Gene position: 2644825-2643182 (Counterclockwise)
Preceding gene: 108759004
Following gene: 108758091
Centisome position: 28.94
GC content: 66.12
Gene sequence:
>1644_bases ATGCGCGAGAGGCAAGGGGGAGAGAACGGAATGGACGTGACTCGCAAGCCGACCCGAGACCTCACCTGCAAGGTGCTGGC GCTCGCATTCACCCTGGCGCTGACAACTGCGTGTCCCGGTGATGACGACGATGATGATGGGGGCAACGGTCCCCCGGGCG ACCCCGTCACCCTGAGCGGCACGGTGACGTACGACTTCGTCCCAGCCGTCTACTCTCCCTCCACGCGGCGGGGGACCCTG GAGTTCAACCAGGCCCAGAAGCGACCCGTGCGCAACGCAGTCGTCCAGGTGCGACAGGGGACGCGGGTGCTCGTCGATGG AACGACGAACCAAGAGGGCCGCTACACGCTGACGTACAGGCCGTCTGGCAGCGGCGCGCTAACGGTCGTCGCGCTCGCCA AGACGACCCAGCCCGAAATCCAGATTGAGGACAACACCGACAACAACGCCATCTGGGCGTTGGGTGGCGACATCACCACG ACGGTGACGACCAAGGACTTGCACGCGACCCACGGCTGGGCGGGCACCAGCTACACGGCCAGCCGGCGCATCGCGGCGCC CTTCGCCATCCTCGACAGCATGTACACCGCGTCGCGGGCCTTCATGGACGTGCGCCCGGTCAACTTCCCGCTGCTGAAGG TGAACTGGAGCCCGAACAACGTGCCCCAGTCTGGCAGCAAGCCGCAGGGCCGCATCGGCACGTCGCACTTCTCCTTCTCG GAGAACGAAATCTACGTGCTCGGCCGGGACGGCGTGGACACCGACGAGTTCGACGCCCACGTCATCGTCCACGAGTGGGG GCACTACTTCGAGGCCAACCTGTCGCGCGCGGACAGCCCGGGCGGACCGCACTCCAGCGGTGACATCCTTGACCCGCGCC TCGCCTTCGGCGAGGGCTATGGCAACGCGCTCGCCAGCATCCTGCTGCCGGAGCCCATCTACGTCGACACGATGTGGAGC GGCTCGACGCTGGCCGCCTTCGGCTTCGACGCGGAGAGCGAGCCGCCCAGCACCGACGACCCGGAAAAGGGCGCCTTCTC CGAGATGAGCGTCTTCCGGCTGCTCTATGACTTGTACGACTCCGGCACCAACGAGTCGTACGACAGGGTGTCGTACGACC TGGGCATCCTCTACGACGTGCTCGTCGGCCCGCAGAAGTCGACGCCCGCGCTGACCACCATCGGCTCGTTCATCAACGGC CTCAACGCCCAGCCCGGCGTCAGCACCGCGGACGTGTACCAACTGCTGGCCCACTACAACATCGGGTCCATCTCCTCGGA CTTCGGAGATGGGGACACCCGGCTGCGCGCCATCTACACCGACGTGCCGGGCATCCCGTACACCACCGAAGTGCCGCTGG TGGGCGGGCTCGACTACAACAAGCGCAAGCAGAACCAGTACTACGTCTTCACCGGCACGGGCCGGAACATGACGCTCAGC GCGTCCCATGCGTCGCAGGACGTGGGCATCGAAGTCTTCGGCCAGGGCCGGAGCCTGGCGGAGTCCGACATCAGCTACAC CGGTACGGAGACGGTCAGCATCCCGACCCAGGCGGACGCGCGGTACGTCGTCGTCGTGTACGGCTTCAAGGAGACGACCG GTAACTACAGTCCCTTCCCCACCCTCTCCATCACCAGCCAGTGA
Upstream 100 bases:
>100_bases GGGCCACTCCCCTGAGTTGACGCCCGGTCCGACAGGTCCGCGGCCGATGTACGTTTGAAGTTGGCTGCGGACTTGTCGAC AATGCCCCGCCTGCCCTCGA
Downstream 100 bases:
>100_bases TTCCGGAGCGCACATGAACCTCAAGGCAATCGCAGCCCTGTCCAGTCTCCTCGCGCTCACGGCGCAGGTCGCCTGCACCT CCCCGTCGAAGTCGAACCCC
Product: putative lipoprotein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 547; Mature: 547
Protein sequence:
>547_residues MRERQGGENGMDVTRKPTRDLTCKVLALAFTLALTTACPGDDDDDDGGNGPPGDPVTLSGTVTYDFVPAVYSPSTRRGTL EFNQAQKRPVRNAVVQVRQGTRVLVDGTTNQEGRYTLTYRPSGSGALTVVALAKTTQPEIQIEDNTDNNAIWALGGDITT TVTTKDLHATHGWAGTSYTASRRIAAPFAILDSMYTASRAFMDVRPVNFPLLKVNWSPNNVPQSGSKPQGRIGTSHFSFS ENEIYVLGRDGVDTDEFDAHVIVHEWGHYFEANLSRADSPGGPHSSGDILDPRLAFGEGYGNALASILLPEPIYVDTMWS GSTLAAFGFDAESEPPSTDDPEKGAFSEMSVFRLLYDLYDSGTNESYDRVSYDLGILYDVLVGPQKSTPALTTIGSFING LNAQPGVSTADVYQLLAHYNIGSISSDFGDGDTRLRAIYTDVPGIPYTTEVPLVGGLDYNKRKQNQYYVFTGTGRNMTLS ASHASQDVGIEVFGQGRSLAESDISYTGTETVSIPTQADARYVVVVYGFKETTGNYSPFPTLSITSQ
Sequences:
>Translated_547_residues MRERQGGENGMDVTRKPTRDLTCKVLALAFTLALTTACPGDDDDDDGGNGPPGDPVTLSGTVTYDFVPAVYSPSTRRGTL EFNQAQKRPVRNAVVQVRQGTRVLVDGTTNQEGRYTLTYRPSGSGALTVVALAKTTQPEIQIEDNTDNNAIWALGGDITT TVTTKDLHATHGWAGTSYTASRRIAAPFAILDSMYTASRAFMDVRPVNFPLLKVNWSPNNVPQSGSKPQGRIGTSHFSFS ENEIYVLGRDGVDTDEFDAHVIVHEWGHYFEANLSRADSPGGPHSSGDILDPRLAFGEGYGNALASILLPEPIYVDTMWS GSTLAAFGFDAESEPPSTDDPEKGAFSEMSVFRLLYDLYDSGTNESYDRVSYDLGILYDVLVGPQKSTPALTTIGSFING LNAQPGVSTADVYQLLAHYNIGSISSDFGDGDTRLRAIYTDVPGIPYTTEVPLVGGLDYNKRKQNQYYVFTGTGRNMTLS ASHASQDVGIEVFGQGRSLAESDISYTGTETVSIPTQADARYVVVVYGFKETTGNYSPFPTLSITSQ >Mature_547_residues MRERQGGENGMDVTRKPTRDLTCKVLALAFTLALTTACPGDDDDDDGGNGPPGDPVTLSGTVTYDFVPAVYSPSTRRGTL EFNQAQKRPVRNAVVQVRQGTRVLVDGTTNQEGRYTLTYRPSGSGALTVVALAKTTQPEIQIEDNTDNNAIWALGGDITT TVTTKDLHATHGWAGTSYTASRRIAAPFAILDSMYTASRAFMDVRPVNFPLLKVNWSPNNVPQSGSKPQGRIGTSHFSFS ENEIYVLGRDGVDTDEFDAHVIVHEWGHYFEANLSRADSPGGPHSSGDILDPRLAFGEGYGNALASILLPEPIYVDTMWS GSTLAAFGFDAESEPPSTDDPEKGAFSEMSVFRLLYDLYDSGTNESYDRVSYDLGILYDVLVGPQKSTPALTTIGSFING LNAQPGVSTADVYQLLAHYNIGSISSDFGDGDTRLRAIYTDVPGIPYTTEVPLVGGLDYNKRKQNQYYVFTGTGRNMTLS ASHASQDVGIEVFGQGRSLAESDISYTGTETVSIPTQADARYVVVVYGFKETTGNYSPFPTLSITSQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 59116; Mature: 59116
Theoretical pI: Translated: 4.46; Mature: 4.46
Prosite motif: PS00142 ZINC_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRERQGGENGMDVTRKPTRDLTCKVLALAFTLALTTACPGDDDDDDGGNGPPGDPVTLSG CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEE TVTYDFVPAVYSPSTRRGTLEFNQAQKRPVRNAVVQVRQGTRVLVDGTTNQEGRYTLTYR EEEEEEECCEECCCCCCCEEEECHHHCCHHHHHHHEECCCCEEEEECCCCCCCCEEEEEC PSGSGALTVVALAKTTQPEIQIEDNTDNNAIWALGGDITTTVTTKDLHATHGWAGTSYTA CCCCCCEEEEEEEECCCCCEEEECCCCCCEEEEECCCEEEEEEECCCCCCCCCCCCCCCC SRRIAAPFAILDSMYTASRAFMDVRPVNFPLLKVNWSPNNVPQSGSKPQGRIGTSHFSFS CCCCCCHHHHHHHHHHHHHHEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCEEECC ENEIYVLGRDGVDTDEFDAHVIVHEWGHYFEANLSRADSPGGPHSSGDILDPRLAFGEGY CCEEEEEECCCCCCCCCCCEEEEECCCCEEECCCCCCCCCCCCCCCCCCCCCHHHCCCCH GNALASILLPEPIYVDTMWSGSTLAAFGFDAESEPPSTDDPEKGAFSEMSVFRLLYDLYD HHHHHHHHCCCCEEEEEECCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH SGTNESYDRVSYDLGILYDVLVGPQKSTPALTTIGSFINGLNAQPGVSTADVYQLLAHYN CCCCCCHHHEEHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCC IGSISSDFGDGDTRLRAIYTDVPGIPYTTEVPLVGGLDYNKRKQNQYYVFTGTGRNMTLS CCCCCCCCCCCCCEEEEEEECCCCCCCEECCCEEECCCCCCCCCCEEEEEEECCCCEEEE ASHASQDVGIEVFGQGRSLAESDISYTGTETVSIPTQADARYVVVVYGFKETTGNYSPFP CCCCCCCCCEEEEECCCCCCCCCCCCCCCEEEECCCCCCCEEEEEEEEEEECCCCCCCCC TLSITSQ EEEECCC >Mature Secondary Structure MRERQGGENGMDVTRKPTRDLTCKVLALAFTLALTTACPGDDDDDDGGNGPPGDPVTLSG CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEE TVTYDFVPAVYSPSTRRGTLEFNQAQKRPVRNAVVQVRQGTRVLVDGTTNQEGRYTLTYR EEEEEEECCEECCCCCCCEEEECHHHCCHHHHHHHEECCCCEEEEECCCCCCCCEEEEEC PSGSGALTVVALAKTTQPEIQIEDNTDNNAIWALGGDITTTVTTKDLHATHGWAGTSYTA CCCCCCEEEEEEEECCCCCEEEECCCCCCEEEEECCCEEEEEEECCCCCCCCCCCCCCCC SRRIAAPFAILDSMYTASRAFMDVRPVNFPLLKVNWSPNNVPQSGSKPQGRIGTSHFSFS CCCCCCHHHHHHHHHHHHHHEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCEEECC ENEIYVLGRDGVDTDEFDAHVIVHEWGHYFEANLSRADSPGGPHSSGDILDPRLAFGEGY CCEEEEEECCCCCCCCCCCEEEEECCCCEEECCCCCCCCCCCCCCCCCCCCCHHHCCCCH GNALASILLPEPIYVDTMWSGSTLAAFGFDAESEPPSTDDPEKGAFSEMSVFRLLYDLYD HHHHHHHHCCCCEEEEEECCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH SGTNESYDRVSYDLGILYDVLVGPQKSTPALTTIGSFINGLNAQPGVSTADVYQLLAHYN CCCCCCHHHEEHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCC IGSISSDFGDGDTRLRAIYTDVPGIPYTTEVPLVGGLDYNKRKQNQYYVFTGTGRNMTLS CCCCCCCCCCCCCEEEEEEECCCCCCCEECCCEEECCCCCCCCCCEEEEEEECCCCEEEE ASHASQDVGIEVFGQGRSLAESDISYTGTETVSIPTQADARYVVVVYGFKETTGNYSPFP CCCCCCCCCEEEEECCCCCCCCCCCCCCCEEEECCCCCCCEEEEEEEEEEECCCCCCCCC TLSITSQ EEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA