| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is 108757299
Identifier: 108757299
GI number: 108757299
Start: 6804817
End: 6806523
Strand: Direct
Name: 108757299
Synonym: MXAN_5466
Alternate gene names: NA
Gene position: 6804817-6806523 (Clockwise)
Preceding gene: 108760237
Following gene: 108763826
Centisome position: 74.45
GC content: 67.84
Gene sequence:
>1707_bases TTGCGAGTGGGGCATACGCCATCACCTCACTCGCCCTGGAAGTCCCTGCACCCGCATTGGCATGCCACATGCTCATGCGG ACTCCACATCACGCCAGGGAATCCCTCTCACTCCCACGCGCAGGCGATGTCCCCTGCCCTGGCGTTCGCTCTGCAGTGGG AACACTCCCCATCTACTTCCATGAATCGAATGTCTGATTGGCTTTCTACCGCGGCGATGTTCGCTGGCCTTGCCACCCTG ACGGGCCTGCCGATGGCCGCCGAGGCCTCGAGCGACGTGTCGCCAGAAATTGTCTCCGCGATGCGTCGGGACCTTGGGCT CACCGAGCAGCAGGTGCATCAGCGCCTGTCCTTCGAGGCGAAGGCGCCCGGGCTGGAGCAGACGATGCGTGAACAACTTG GCGACGCCTTCGGTGGCGCCTGGCTCGACGCGGAGGGCGGCCAGCTCATCGTTGGTGTCACCGACGAGGCCCGCCTCGCC AAGACCCGGGTCGCCGGCGTGCGGACCGTGCACGTGGCGCGGAGCCTGGCGCGGCTGGAGCAGGTGAAGGCGGAACTGGA CCAGAACGTCCAGGCCCTCTCGCCCGCCATCCACTCCTGGTACGTCGACCTGCCGACGAACAGCGTCGTCGTCTACGTGG ACGCCTCCAGCCAGACGAAGCTGCGCGCGGATGCCTTCATCGCGCAGAGCTCGGGCCTGAAAGACGGCAGCCTCCGCGTG GTGGCCTCCACCCACGCGCCCGAGCCCGCCTATGACCTGCGCGGCGGTGACCCCTACTACTTCAGCAACTACCGCTGTTC GGTGGGCTTCCCCGTCAACGGGGGCTTCGTCACCGCCGGCCACTGCGGCGGCGCCGGCACGCCCACCACGGGGCACAACG GCGTGGCCCTGGGCACCATCCGTGGCTCCGTCTGGCCCGGCTCCGACTACGGCTGGGTGGCCACCCATGGCTCGTGGACC CCGCAGCCGTGGGTCAACAACTACAGCGGCGGCAACGTCACCGTCGCGGGCTCCCAGGAGGCTCCGGTGAATGCCTCCAT CTGCCGCTCCGGCTACACCACCGGCTGGCGGTGCGGCGTGCTCCAGGCGAAGAACATCACCGTCAACTACTCCGTCGGGC CCGTGTACGGCCTGCACAAGACGAACGCGTGCGCGGACGGCGGCGACTCCGGCGGCTCCGTCATCTCCGGCAACCAGGCC CAGGGCGTGACGTCCGGCGTGGCGGGCACGTGCGCCAACGGAAATCCGCCGCAGACGTTCTACCAACCCGTCAACCCCAT CCTGGGCGCCTACGGCCTGACGCTCCGCACGACGGGCGGTGGCGGCAGTGGACGGTCCTTCGTGTCGCGCCTCAACGGCA AGTGCATCGACGTACCCAACTCCAACTTCTCCGACGGAGTGCAGCTCCAGATGTGGGACTGCAATGGCACGAACGCGCAG CGGTGGACCTTCATCAACGGCACCGTTCAGGCGGGCGGCAAGTGCATGGACGTGGCCTGGGCCTCCACGGCCAACGGCGC GGCCATCCAGTTGGCCAACTGCAGCGGCAACCCGGCACAGCAGTTCGTGCTGAGCGGCGCGGGTGACCTCGTCAGCGTGC TCGCCAACAAGTGCGTGGACATCGTGAACCACAACACGTCCAGCGGCGCCCGGCTCATCATCTACGAGTGCACGGGCAAC CCGAACCAGAAGTGGGACTACCGCTGA
Upstream 100 bases:
>100_bases GCAGCAGTCCCAACGTCAGCCAGCTCGATTTCGGCCTGACGCAGGGTGGTAACACCAGTCACCAGCCGAGGACGGCTGTC ACCACCTGTCCGTCATAAAA
Downstream 100 bases:
>100_bases ACCCTCCGTCGCCTGACCGAGCGACCCGGGTGCCTGGAGGCGATTCAGGCACCGAGGGCCGCGCGGGCGTGACACGCTGA GGTCCTCCAGCGCGCCTGGG
Product: S1E family peptidase
Products: NA
Alternate protein names: Serine protease I; RPI [H]
Number of amino acids: Translated: 568; Mature: 568
Protein sequence:
>568_residues MRVGHTPSPHSPWKSLHPHWHATCSCGLHITPGNPSHSHAQAMSPALAFALQWEHSPSTSMNRMSDWLSTAAMFAGLATL TGLPMAAEASSDVSPEIVSAMRRDLGLTEQQVHQRLSFEAKAPGLEQTMREQLGDAFGGAWLDAEGGQLIVGVTDEARLA KTRVAGVRTVHVARSLARLEQVKAELDQNVQALSPAIHSWYVDLPTNSVVVYVDASSQTKLRADAFIAQSSGLKDGSLRV VASTHAPEPAYDLRGGDPYYFSNYRCSVGFPVNGGFVTAGHCGGAGTPTTGHNGVALGTIRGSVWPGSDYGWVATHGSWT PQPWVNNYSGGNVTVAGSQEAPVNASICRSGYTTGWRCGVLQAKNITVNYSVGPVYGLHKTNACADGGDSGGSVISGNQA QGVTSGVAGTCANGNPPQTFYQPVNPILGAYGLTLRTTGGGGSGRSFVSRLNGKCIDVPNSNFSDGVQLQMWDCNGTNAQ RWTFINGTVQAGGKCMDVAWASTANGAAIQLANCSGNPAQQFVLSGAGDLVSVLANKCVDIVNHNTSSGARLIIYECTGN PNQKWDYR
Sequences:
>Translated_568_residues MRVGHTPSPHSPWKSLHPHWHATCSCGLHITPGNPSHSHAQAMSPALAFALQWEHSPSTSMNRMSDWLSTAAMFAGLATL TGLPMAAEASSDVSPEIVSAMRRDLGLTEQQVHQRLSFEAKAPGLEQTMREQLGDAFGGAWLDAEGGQLIVGVTDEARLA KTRVAGVRTVHVARSLARLEQVKAELDQNVQALSPAIHSWYVDLPTNSVVVYVDASSQTKLRADAFIAQSSGLKDGSLRV VASTHAPEPAYDLRGGDPYYFSNYRCSVGFPVNGGFVTAGHCGGAGTPTTGHNGVALGTIRGSVWPGSDYGWVATHGSWT PQPWVNNYSGGNVTVAGSQEAPVNASICRSGYTTGWRCGVLQAKNITVNYSVGPVYGLHKTNACADGGDSGGSVISGNQA QGVTSGVAGTCANGNPPQTFYQPVNPILGAYGLTLRTTGGGGSGRSFVSRLNGKCIDVPNSNFSDGVQLQMWDCNGTNAQ RWTFINGTVQAGGKCMDVAWASTANGAAIQLANCSGNPAQQFVLSGAGDLVSVLANKCVDIVNHNTSSGARLIIYECTGN PNQKWDYR >Mature_568_residues MRVGHTPSPHSPWKSLHPHWHATCSCGLHITPGNPSHSHAQAMSPALAFALQWEHSPSTSMNRMSDWLSTAAMFAGLATL TGLPMAAEASSDVSPEIVSAMRRDLGLTEQQVHQRLSFEAKAPGLEQTMREQLGDAFGGAWLDAEGGQLIVGVTDEARLA KTRVAGVRTVHVARSLARLEQVKAELDQNVQALSPAIHSWYVDLPTNSVVVYVDASSQTKLRADAFIAQSSGLKDGSLRV VASTHAPEPAYDLRGGDPYYFSNYRCSVGFPVNGGFVTAGHCGGAGTPTTGHNGVALGTIRGSVWPGSDYGWVATHGSWT PQPWVNNYSGGNVTVAGSQEAPVNASICRSGYTTGWRCGVLQAKNITVNYSVGPVYGLHKTNACADGGDSGGSVISGNQA QGVTSGVAGTCANGNPPQTFYQPVNPILGAYGLTLRTTGGGGSGRSFVSRLNGKCIDVPNSNFSDGVQLQMWDCNGTNAQ RWTFINGTVQAGGKCMDVAWASTANGAAIQLANCSGNPAQQFVLSGAGDLVSVLANKCVDIVNHNTSSGARLIIYECTGN PNQKWDYR
Specific function: Major serine protease exhibiting lytic activity toward living yeast cells. Similar to elastase in its substrate specificity and has a lectin-like affinity for mannose. Mannoproteins may be the native substrate for RPI [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Secreted [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ricin B-type lectin domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009003 - InterPro: IPR004236 - InterPro: IPR001316 - InterPro: IPR008997 - InterPro: IPR000772 [H]
Pfam domain/function: PF02983 Pro_Al_protease; PF00652 Ricin_B_lectin [H]
EC number: NA
Molecular weight: Translated: 59676; Mature: 59676
Theoretical pI: Translated: 7.39; Mature: 7.39
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50231 RICIN_B_LECTIN ; PS00134 TRYPSIN_HIS ; PS00135 TRYPSIN_SER ; PS00178 AA_TRNA_LIGASE_I
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRVGHTPSPHSPWKSLHPHWHATCSCGLHITPGNPSHSHAQAMSPALAFALQWEHSPSTS CCCCCCCCCCCCHHHCCCCCCEEEECCEEECCCCCCCHHHHHHCCEEEEEEEECCCCCCH MNRMSDWLSTAAMFAGLATLTGLPMAAEASSDVSPEIVSAMRRDLGLTEQQVHQRLSFEA HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHCCCC KAPGLEQTMREQLGDAFGGAWLDAEGGQLIVGVTDEARLAKTRVAGVRTVHVARSLARLE CCCCHHHHHHHHHHHHHCCEEEECCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHH QVKAELDQNVQALSPAIHSWYVDLPTNSVVVYVDASSQTKLRADAFIAQSSGLKDGSLRV HHHHHHHCCHHHHCCCHHEEEEECCCCCEEEEEECCCCCEEHHHHEEECCCCCCCCCEEE VASTHAPEPAYDLRGGDPYYFSNYRCSVGFPVNGGFVTAGHCGGAGTPTTGHNGVALGTI EEECCCCCCCCCCCCCCCEEECCEEEEECCCCCCCEEEECCCCCCCCCCCCCCCEEEEEE RGSVWPGSDYGWVATHGSWTPQPWVNNYSGGNVTVAGSQEAPVNASICRSGYTTGWRCGV ECCCCCCCCCCEEEECCCCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHCCCCCCEEEEE LQAKNITVNYSVGPVYGLHKTNACADGGDSGGSVISGNQAQGVTSGVAGTCANGNPPQTF EEECEEEEEEECCCEECCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCEECCCCCCCHHH YQPVNPILGAYGLTLRTTGGGGSGRSFVSRLNGKCIDVPNSNFSDGVQLQMWDCNGTNAQ HHHHHHHHHCCCEEEEECCCCCCHHHHHHHHCCCEEECCCCCCCCCCEEEEEECCCCCCC RWTFINGTVQAGGKCMDVAWASTANGAAIQLANCSGNPAQQFVLSGAGDLVSVLANKCVD EEEEEECEECCCCEEEEEEEECCCCCCEEEEECCCCCHHHHHHHCCCHHHHHHHHHHHHH IVNHNTSSGARLIIYECTGNPNQKWDYR HHCCCCCCCCEEEEEEECCCCCCCCCCC >Mature Secondary Structure MRVGHTPSPHSPWKSLHPHWHATCSCGLHITPGNPSHSHAQAMSPALAFALQWEHSPSTS CCCCCCCCCCCCHHHCCCCCCEEEECCEEECCCCCCCHHHHHHCCEEEEEEEECCCCCCH MNRMSDWLSTAAMFAGLATLTGLPMAAEASSDVSPEIVSAMRRDLGLTEQQVHQRLSFEA HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHCCCC KAPGLEQTMREQLGDAFGGAWLDAEGGQLIVGVTDEARLAKTRVAGVRTVHVARSLARLE CCCCHHHHHHHHHHHHHCCEEEECCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHH QVKAELDQNVQALSPAIHSWYVDLPTNSVVVYVDASSQTKLRADAFIAQSSGLKDGSLRV HHHHHHHCCHHHHCCCHHEEEEECCCCCEEEEEECCCCCEEHHHHEEECCCCCCCCCEEE VASTHAPEPAYDLRGGDPYYFSNYRCSVGFPVNGGFVTAGHCGGAGTPTTGHNGVALGTI EEECCCCCCCCCCCCCCCEEECCEEEEECCCCCCCEEEECCCCCCCCCCCCCCCEEEEEE RGSVWPGSDYGWVATHGSWTPQPWVNNYSGGNVTVAGSQEAPVNASICRSGYTTGWRCGV ECCCCCCCCCCEEEECCCCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHCCCCCCEEEEE LQAKNITVNYSVGPVYGLHKTNACADGGDSGGSVISGNQAQGVTSGVAGTCANGNPPQTF EEECEEEEEEECCCEECCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCEECCCCCCCHHH YQPVNPILGAYGLTLRTTGGGGSGRSFVSRLNGKCIDVPNSNFSDGVQLQMWDCNGTNAQ HHHHHHHHHCCCEEEEECCCCCCHHHHHHHHCCCEEECCCCCCCCCCEEEEEECCCCCCC RWTFINGTVQAGGKCMDVAWASTANGAAIQLANCSGNPAQQFVLSGAGDLVSVLANKCVD EEEEEECEECCCCEEEEEEEECCCCCCEEEEECCCCCHHHHHHHCCCHHHHHHHHHHHHH IVNHNTSSGARLIIYECTGNPNQKWDYR HHCCCCCCCCEEEEEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1339445; 1778983 [H]