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The map label for this gene is tsf

Identifier: 108757293

GI number: 108757293

Start: 6651404

End: 6652057

Strand: Reverse

Name: tsf

Synonym: MXAN_5343

Alternate gene names: 108757293

Gene position: 6652057-6651404 (Counterclockwise)

Preceding gene: 108758377

Following gene: 108762561

Centisome position: 72.78

GC content: 63.46

Gene sequence:

>654_bases
ATGGCCGAAGTTAGCGCCCAGATGGTGAAGGAGCTCCGCGAGCGGACCAACGCGGGCATGATGGACTGCAAGAAGGCGCT
CGCCGAGTCGGGTGGCGACTTCGCCAAGGCCGAGGAGTGGCTGCGCAAGAAGGGCATCGCCAAGGCCGCTGGCAAGGAAG
GCCGCGTTGCCTCCGAAGGCATCATCGGCACCTACGTTCACAGTGGCCGCATCGGCGTCATCGTCGAGGTGAACTGCGAG
ACGGACTTCGTTGCTCGCAACCCCGACTTCCAGGAGCTGGTGAAGGACGTGGCCATGCAGATTGCCGCGGCCGGCCCCAA
GTTCGTCCGTCGTGAGGAGGTCCCCACGGACAACCTGGACAAGGAGAAGGACATCCAGCGCGAGATCCTCAAGCAGCAGG
GCAAGCCTGAGGCGATGCTGGAGAAGATCCTCGTCGGGAAGATGGAGAAGTACTACGAGGGCGTGTGCCTCGTGGACCAG
CTCTGGGTGAAGGACGACAAGAAGAAGGTCGGCGAGATGATCTCCGAGCGCGCCGCGAAGATTGGCGAGAAGGTCTCCGT
GCGCCGCTTCGTCCGCTACGAGCTGGGTGAGGGCATCGAGAAGAAGAAGGACGACCTCGCCGCCGAAGTCGCCAAGACGC
TGGGCCAGGCGTAA

Upstream 100 bases:

>100_bases
CCCGGCCGCCTCTGTTTCCCTGGTGCCGCAGTATCCCCTTGAACTTACAATGCTCCGCCCGGCGCAGTGCGCCTTGGAGT
GGCGGAGGCAGGAGACGACG

Downstream 100 bases:

>100_bases
GGCCTCCGCGGTCCCCACGGGGCCGCGAGCCTGGACGCAGGGCTGACAAGGGCCGCGCGCGCCGGAAACACCCCCCACGG
GGCGTCCGGGCGACGCGGCC

Product: translation elongation factor Ts

Products: NA

Alternate protein names: EF-Ts

Number of amino acids: Translated: 217; Mature: 216

Protein sequence:

>217_residues
MAEVSAQMVKELRERTNAGMMDCKKALAESGGDFAKAEEWLRKKGIAKAAGKEGRVASEGIIGTYVHSGRIGVIVEVNCE
TDFVARNPDFQELVKDVAMQIAAAGPKFVRREEVPTDNLDKEKDIQREILKQQGKPEAMLEKILVGKMEKYYEGVCLVDQ
LWVKDDKKKVGEMISERAAKIGEKVSVRRFVRYELGEGIEKKKDDLAAEVAKTLGQA

Sequences:

>Translated_217_residues
MAEVSAQMVKELRERTNAGMMDCKKALAESGGDFAKAEEWLRKKGIAKAAGKEGRVASEGIIGTYVHSGRIGVIVEVNCE
TDFVARNPDFQELVKDVAMQIAAAGPKFVRREEVPTDNLDKEKDIQREILKQQGKPEAMLEKILVGKMEKYYEGVCLVDQ
LWVKDDKKKVGEMISERAAKIGEKVSVRRFVRYELGEGIEKKKDDLAAEVAKTLGQA
>Mature_216_residues
AEVSAQMVKELRERTNAGMMDCKKALAESGGDFAKAEEWLRKKGIAKAAGKEGRVASEGIIGTYVHSGRIGVIVEVNCET
DFVARNPDFQELVKDVAMQIAAAGPKFVRREEVPTDNLDKEKDIQREILKQQGKPEAMLEKILVGKMEKYYEGVCLVDQL
WVKDDKKKVGEMISERAAKIGEKVSVRRFVRYELGEGIEKKKDDLAAEVAKTLGQA

Specific function: Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome

COG id: COG0264

COG function: function code J; Translation elongation factor Ts

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the EF-Ts family

Homologues:

Organism=Homo sapiens, GI291084498, Length=99, Percent_Identity=47.4747474747475, Blast_Score=90, Evalue=2e-18,
Organism=Homo sapiens, GI291084502, Length=99, Percent_Identity=47.4747474747475, Blast_Score=89, Evalue=3e-18,
Organism=Homo sapiens, GI171846268, Length=99, Percent_Identity=47.4747474747475, Blast_Score=88, Evalue=4e-18,
Organism=Homo sapiens, GI291084500, Length=99, Percent_Identity=47.4747474747475, Blast_Score=88, Evalue=5e-18,
Organism=Escherichia coli, GI1786366, Length=105, Percent_Identity=55.2380952380952, Blast_Score=108, Evalue=2e-25,
Organism=Caenorhabditis elegans, GI17561440, Length=201, Percent_Identity=27.8606965174129, Blast_Score=68, Evalue=3e-12,
Organism=Drosophila melanogaster, GI19921466, Length=91, Percent_Identity=41.7582417582418, Blast_Score=70, Evalue=8e-13,

Paralogues:

None

Copy number: 2670 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1100 Molecules/Cell In: Stationary-Phase, Rich-Media (Based on E. coli). 4173 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 14563 Molecules/Cell In: Growth Phase, Gluco

Swissprot (AC and ID): EFTS_MYXXD (Q1D1I0)

Other databases:

- EMBL:   CP000113
- RefSeq:   YP_633493.1
- ProteinModelPortal:   Q1D1I0
- SMR:   Q1D1I0
- STRING:   Q1D1I0
- GeneID:   4101617
- GenomeReviews:   CP000113_GR
- KEGG:   mxa:MXAN_5343
- TIGR:   MXAN_5343
- eggNOG:   COG0264
- HOGENOM:   HBG713289
- OMA:   NVEYVSI
- BioCyc:   MXAN246197:MXAN_5343-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_00050
- InterPro:   IPR001816
- InterPro:   IPR014039
- InterPro:   IPR018101
- InterPro:   IPR009060
- InterPro:   IPR000449
- Gene3D:   G3DSA:3.30.479.20
- PANTHER:   PTHR11741
- TIGRFAMs:   TIGR00116

Pfam domain/function: PF00889 EF_TS; PF00627 UBA; SSF54713 EF_TS; SSF46934 UBA_like

EC number: NA

Molecular weight: Translated: 24147; Mature: 24016

Theoretical pI: Translated: 8.02; Mature: 8.02

Prosite motif: PS01126 EF_TS_1; PS01127 EF_TS_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAEVSAQMVKELRERTNAGMMDCKKALAESGGDFAKAEEWLRKKGIAKAAGKEGRVASEG
CCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHCHHHHCCCCCCCHHCC
IIGTYVHSGRIGVIVEVNCETDFVARNPDFQELVKDVAMQIAAAGPKFVRREEVPTDNLD
CHHEEEECCCEEEEEEECCCCCCEECCCCHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCC
KEKDIQREILKQQGKPEAMLEKILVGKMEKYYEGVCLVDQLWVKDDKKKVGEMISERAAK
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
IGEKVSVRRFVRYELGEGIEKKKDDLAAEVAKTLGQA
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
AEVSAQMVKELRERTNAGMMDCKKALAESGGDFAKAEEWLRKKGIAKAAGKEGRVASEG
CCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHCHHHHCCCCCCCHHCC
IIGTYVHSGRIGVIVEVNCETDFVARNPDFQELVKDVAMQIAAAGPKFVRREEVPTDNLD
CHHEEEECCCEEEEEEECCCCCCEECCCCHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCC
KEKDIQREILKQQGKPEAMLEKILVGKMEKYYEGVCLVDQLWVKDDKKKVGEMISERAAK
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
IGEKVSVRRFVRYELGEGIEKKKDDLAAEVAKTLGQA
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA