| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is 108757139
Identifier: 108757139
GI number: 108757139
Start: 5883385
End: 5884488
Strand: Reverse
Name: 108757139
Synonym: MXAN_4695
Alternate gene names: NA
Gene position: 5884488-5883385 (Counterclockwise)
Preceding gene: 108761049
Following gene: 108761956
Centisome position: 64.38
GC content: 70.47
Gene sequence:
>1104_bases ATGTTGCGACCTGTTGCACTCATCCTGCTCCTGCTGGTCCCTTCGGGCGTGCTCGCCGTGGAGACCCTGCGCATCTCCAT CGAGGACGCGGGCAGTGAGGTGCGCATCAGCGGCCGGGGGCTGGCCTCCGGTCCCGACAGCGAGGAGGCCACTTTCGCCC CCATCACCTCGGGACAGGCGAACGTCCGCCGCAAGGGGGGCCGCATCGAGGTCAACGGCACGCCCGTGGAGGGCGACTCC GTCCGCTTCCGCGCTGGCATGTCGGAGGCCTCGGCCGCGCCTGGCACCGAGCCGCTCAAGGCGGGCGCGGCGCAGGTCCG CGGCGATGTGGTGGTGCGCCTGCACCGCAGTGGGCTGCAGCTCATCAACGTCATTCCCTTGGAGGACTACCTCGCCGCCG TGCTGGGCAGCGAGATGCCCGTGTCGTTTCCCCCGGAGGCCCTCAAGGCCCAGGCGGTGGCTGCCCGGACGTATGCGCTC CAGAAGAAGCTGGATGCCTACAGCAACGCGTTCCACCTGGGCAGCAGCGTGCTCCATCAAGTCTATGGCGGCGTCAACCG CGAGGACCCTCGCACCAAGGCCGCCGTCGAGGCCACGCGGGGACAGGTGCTCACGTACGAGCTGGCGCCCATCGAGGCGT ACTTCCATGCCTCCTGTGGCGGCCGGACGGAGTCGGGGCTCGATGCCTTGCAGCGCGACCTGCCGTACCTCCAGCCCGTC GACTGCCCCTGCGGAAAGCTCCCCGCCAGCCGGTGGACGGCGACGCTCTCCGACGCGGACATCAAGGCGGCGCTCCGCCA CCCGGCCCAGGGGCTCAAGGTGGCGGCCCGCACGCGGACGCGCCGGGTGACGCGCGTCACCCTGGCGGACGGCGCCTCCA TGGACGGCGTGGAGTTGCGCCGCAAGCTTGGCTACACCCGGCTCAAGAGCCTGGACTTCGAGGTGGAACGCACCGAGCGC GGTTACGTGTTCACCGGTCGCGGCTATGGCCACGGGGCGGGCCTGTGTCAGTGGGGCGCCAAGGCGCTCGCCGACAAAGG CCGGGAGTACCGGGAGATCCTCTCCCACTACTACCCCGGGGCCGAGCTGCAGCAGCTCTACTGA
Upstream 100 bases:
>100_bases GGAAGGCAGGGCGCGAAGGTGACGTCACGGGTGAGCCATCCTCTCCCATCCGCCGGACGTTTTCTTGAGGCGAGCACCCA CGCCTCTACACTTCGGGGCC
Downstream 100 bases:
>100_bases CGCCTCCCGCGTCCGGCGCGCTTTCCGCGACGGCGTGGGGGCTGCTACAAGCGCCACCCCCGTGTCGTCCCGTCTCTCTG ATTACGACTTCGCGCTGCCC
Product: SpoIID/LytB domain-containing protein
Products: NA
Alternate protein names: H-34 [H]
Number of amino acids: Translated: 367; Mature: 367
Protein sequence:
>367_residues MLRPVALILLLLVPSGVLAVETLRISIEDAGSEVRISGRGLASGPDSEEATFAPITSGQANVRRKGGRIEVNGTPVEGDS VRFRAGMSEASAAPGTEPLKAGAAQVRGDVVVRLHRSGLQLINVIPLEDYLAAVLGSEMPVSFPPEALKAQAVAARTYAL QKKLDAYSNAFHLGSSVLHQVYGGVNREDPRTKAAVEATRGQVLTYELAPIEAYFHASCGGRTESGLDALQRDLPYLQPV DCPCGKLPASRWTATLSDADIKAALRHPAQGLKVAARTRTRRVTRVTLADGASMDGVELRRKLGYTRLKSLDFEVERTER GYVFTGRGYGHGAGLCQWGAKALADKGREYREILSHYYPGAELQQLY
Sequences:
>Translated_367_residues MLRPVALILLLLVPSGVLAVETLRISIEDAGSEVRISGRGLASGPDSEEATFAPITSGQANVRRKGGRIEVNGTPVEGDS VRFRAGMSEASAAPGTEPLKAGAAQVRGDVVVRLHRSGLQLINVIPLEDYLAAVLGSEMPVSFPPEALKAQAVAARTYAL QKKLDAYSNAFHLGSSVLHQVYGGVNREDPRTKAAVEATRGQVLTYELAPIEAYFHASCGGRTESGLDALQRDLPYLQPV DCPCGKLPASRWTATLSDADIKAALRHPAQGLKVAARTRTRRVTRVTLADGASMDGVELRRKLGYTRLKSLDFEVERTER GYVFTGRGYGHGAGLCQWGAKALADKGREYREILSHYYPGAELQQLY >Mature_367_residues MLRPVALILLLLVPSGVLAVETLRISIEDAGSEVRISGRGLASGPDSEEATFAPITSGQANVRRKGGRIEVNGTPVEGDS VRFRAGMSEASAAPGTEPLKAGAAQVRGDVVVRLHRSGLQLINVIPLEDYLAAVLGSEMPVSFPPEALKAQAVAARTYAL QKKLDAYSNAFHLGSSVLHQVYGGVNREDPRTKAAVEATRGQVLTYELAPIEAYFHASCGGRTESGLDALQRDLPYLQPV DCPCGKLPASRWTATLSDADIKAALRHPAQGLKVAARTRTRRVTRVTLADGASMDGVELRRKLGYTRLKSLDFEVERTER GYVFTGRGYGHGAGLCQWGAKALADKGREYREILSHYYPGAELQQLY
Specific function: Might be involved in sporulation [H]
COG id: COG2385
COG function: function code D; Sporulation protein and related proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013486 - InterPro: IPR013693 [H]
Pfam domain/function: PF08486 SpoIID [H]
EC number: NA
Molecular weight: Translated: 39508; Mature: 39508
Theoretical pI: Translated: 9.20; Mature: 9.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRPVALILLLLVPSGVLAVETLRISIEDAGSEVRISGRGLASGPDSEEATFAPITSGQA CCHHHHHHHHHHHCCCCEEEEEEEEEEECCCCEEEEECCCCCCCCCCCCCEEEECCCCCC NVRRKGGRIEVNGTPVEGDSVRFRAGMSEASAAPGTEPLKAGAAQVRGDVVVRLHRSGLQ HHHHCCCEEEECCCCCCCCCEEEECCCCCCCCCCCCCHHHHCHHHHCCCEEEEEECCCCE LINVIPLEDYLAAVLGSEMPVSFPPEALKAQAVAARTYALQKKLDAYSNAFHLGSSVLHQ EEEEECHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VYGGVNREDPRTKAAVEATRGQVLTYELAPIEAYFHASCGGRTESGLDALQRDLPYLQPV HHCCCCCCCCHHHHHHHHCCCEEEEEEECCEEEEEECCCCCCCHHHHHHHHHCCCCCCCC DCPCGKLPASRWTATLSDADIKAALRHPAQGLKVAARTRTRRVTRVTLADGASMDGVELR CCCCCCCCHHHHEEECCCHHHHHHHHCCHHHHEEHHHHHHCEEEEEEEECCCCCCHHHHH RKLGYTRLKSLDFEVERTERGYVFTGRGYGHGAGLCQWGAKALADKGREYREILSHYYPG HHHCHHHHHHCCCEEEECCCCEEEECCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHCCC AELQQLY HHHHHCC >Mature Secondary Structure MLRPVALILLLLVPSGVLAVETLRISIEDAGSEVRISGRGLASGPDSEEATFAPITSGQA CCHHHHHHHHHHHCCCCEEEEEEEEEEECCCCEEEEECCCCCCCCCCCCCEEEECCCCCC NVRRKGGRIEVNGTPVEGDSVRFRAGMSEASAAPGTEPLKAGAAQVRGDVVVRLHRSGLQ HHHHCCCEEEECCCCCCCCCEEEECCCCCCCCCCCCCHHHHCHHHHCCCEEEEEECCCCE LINVIPLEDYLAAVLGSEMPVSFPPEALKAQAVAARTYALQKKLDAYSNAFHLGSSVLHQ EEEEECHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VYGGVNREDPRTKAAVEATRGQVLTYELAPIEAYFHASCGGRTESGLDALQRDLPYLQPV HHCCCCCCCCHHHHHHHHCCCEEEEEEECCEEEEEECCCCCCCHHHHHHHHHCCCCCCCC DCPCGKLPASRWTATLSDADIKAALRHPAQGLKVAARTRTRRVTRVTLADGASMDGVELR CCCCCCCCHHHHEEECCCHHHHHHHHCCHHHHEEHHHHHHCEEEEEEEECCCCCCHHHHH RKLGYTRLKSLDFEVERTERGYVFTGRGYGHGAGLCQWGAKALADKGREYREILSHYYPG HHHCHHHHHHCCCEEEECCCCEEEECCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHCCC AELQQLY HHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA