| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is lip [H]
Identifier: 108756922
GI number: 108756922
Start: 6872775
End: 6873734
Strand: Direct
Name: lip [H]
Synonym: MXAN_5522
Alternate gene names: 108756922
Gene position: 6872775-6873734 (Clockwise)
Preceding gene: 108760692
Following gene: 108762888
Centisome position: 75.2
GC content: 66.77
Gene sequence:
>960_bases GTGGACCCGTCCCCCGAACAGGAGCCCCTCCTCATGCGAAACGCTGTCCGGACACTGGTTCTGGCTGTCGCGGCACTTGG CTTGTGGTCGCAACCCGCGCTCGCGAATACCCAAACGCAGACCCGCTATCCCATCGTGCTGGCGCACGGCATGGCGGGCT TCGACTCGCTGTTTGGCGTCTACGACTACTTCTACGGCATCGGCTCCGACCTGCGCTCGGGCGGGGCGACGGTGTACGTG ACGAGCGTTCCGCAGTTCAACACCACGGAGCAGCGTGGCGAGGCGCTGCTGGCGCAGGTGAAGGACATCGTCGCGCGCTC GGGCAAGGGCAAGGTGAACCTCATTGGCCACAGCCACGGCGGCCTGGACGTGCGCTATGTGGCGGCGGTGCGCCCGGACC TGGTGGCGTCCGTGACGACGGTGGGCTCTCCGCACAAGGGCGCGGACCTGGCGGACTACCTGCGCGCCAACCTCCGGGGC GGCTCCTTCACGGAGAGCGTGCTGGCCTACTTCGCCAACAACCTGGGCACCGTCCTGGGGCTGCTGTCGGGGAAGACGAA CCCGCAGGACGCCATTGGCGCGCTGGCGGCGCTCAGCAAGTCTGGCACGGCGGCGTTCAACCAGAAGTACCCGGCGGGCA TCCCCTCCAGCAGTTGTGGCCAGGGCGCCGCGACGGGCACGCAGGGCCAGCGCTACTACTCCTGGTCCGGCACGGACCCC TTCACCAACATGCTCGACGTGTCCGACTACCCGATGAAGCTGAGCTCGTTCTTCTACAGCGAGGCGAACGACGGCCTGGT CGGCAAGTGCAGCTCGCACTTCGGCACGGTGTTGCGTGACAACTACGACATGAACCACCTGGACGAGGTGAACCAGGTGC TGGGCCTCACCGCCTTCTTCACCAACCCGAAGACGGTGTTCCGCAACCATGCCAACCGCCTGAAGGGGCTCGGCCTCTAG
Upstream 100 bases:
>100_bases GGATGCGACAACTGACCTCGCCCGGTTTACTGATAATGCGGGAGGCGCCTTGATTCTGGTCTGTGATTGGCCTACGCGTT GACTCGCGGGTCAATCCGCA
Downstream 100 bases:
>100_bases ACGGCCGCGCGCGAAGGACCGCCATGAAGAACCGCGCCGTCATTCCCGTAGCCGCGCTGTGCGCCCTGCTGGGTGCGGGC GTGTTCTCATGGTGGAAGGC
Product: lactonizing lipase
Products: NA
Alternate protein names: Triacylglycerol lipase [H]
Number of amino acids: Translated: 319; Mature: 319
Protein sequence:
>319_residues MDPSPEQEPLLMRNAVRTLVLAVAALGLWSQPALANTQTQTRYPIVLAHGMAGFDSLFGVYDYFYGIGSDLRSGGATVYV TSVPQFNTTEQRGEALLAQVKDIVARSGKGKVNLIGHSHGGLDVRYVAAVRPDLVASVTTVGSPHKGADLADYLRANLRG GSFTESVLAYFANNLGTVLGLLSGKTNPQDAIGALAALSKSGTAAFNQKYPAGIPSSSCGQGAATGTQGQRYYSWSGTDP FTNMLDVSDYPMKLSSFFYSEANDGLVGKCSSHFGTVLRDNYDMNHLDEVNQVLGLTAFFTNPKTVFRNHANRLKGLGL
Sequences:
>Translated_319_residues MDPSPEQEPLLMRNAVRTLVLAVAALGLWSQPALANTQTQTRYPIVLAHGMAGFDSLFGVYDYFYGIGSDLRSGGATVYV TSVPQFNTTEQRGEALLAQVKDIVARSGKGKVNLIGHSHGGLDVRYVAAVRPDLVASVTTVGSPHKGADLADYLRANLRG GSFTESVLAYFANNLGTVLGLLSGKTNPQDAIGALAALSKSGTAAFNQKYPAGIPSSSCGQGAATGTQGQRYYSWSGTDP FTNMLDVSDYPMKLSSFFYSEANDGLVGKCSSHFGTVLRDNYDMNHLDEVNQVLGLTAFFTNPKTVFRNHANRLKGLGL >Mature_319_residues MDPSPEQEPLLMRNAVRTLVLAVAALGLWSQPALANTQTQTRYPIVLAHGMAGFDSLFGVYDYFYGIGSDLRSGGATVYV TSVPQFNTTEQRGEALLAQVKDIVARSGKGKVNLIGHSHGGLDVRYVAAVRPDLVASVTTVGSPHKGADLADYLRANLRG GSFTESVLAYFANNLGTVLGLLSGKTNPQDAIGALAALSKSGTAAFNQKYPAGIPSSSCGQGAATGTQGQRYYSWSGTDP FTNMLDVSDYPMKLSSFFYSEANDGLVGKCSSHFGTVLRDNYDMNHLDEVNQVLGLTAFFTNPKTVFRNHANRLKGLGL
Specific function: Catalyzes the hydrolysis of triglycerides. Catalyzes the synthesis of macrocyclic lactones in anhydrous organic solvents [H]
COG id: COG1075
COG function: function code R; Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold
Gene ontology:
Cell location: Cell surface. Secreted, extracellular space. Note=During early stationary growth phase about 10% of the enzyme molecules remain cell-bound while about 90% are released into the growth medium [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the AB hydrolase superfamily. Pseudomonas lipase family [H]
Homologues:
Organism=Saccharomyces cerevisiae, GI6320263, Length=174, Percent_Identity=31.0344827586207, Blast_Score=82, Evalue=1e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000073 [H]
Pfam domain/function: PF00561 Abhydrolase_1 [H]
EC number: =3.1.1.3 [H]
Molecular weight: Translated: 33989; Mature: 33989
Theoretical pI: Translated: 8.19; Mature: 8.19
Prosite motif: PS00120 LIPASE_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDPSPEQEPLLMRNAVRTLVLAVAALGLWSQPALANTQTQTRYPIVLAHGMAGFDSLFGV CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHH YDYFYGIGSDLRSGGATVYVTSVPQFNTTEQRGEALLAQVKDIVARSGKGKVNLIGHSHG HHHHHHCCHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCC GLDVRYVAAVRPDLVASVTTVGSPHKGADLADYLRANLRGGSFTESVLAYFANNLGTVLG CCEEEEEEHHCCHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH LLSGKTNPQDAIGALAALSKSGTAAFNQKYPAGIPSSSCGQGAATGTQGQRYYSWSGTDP HHCCCCCHHHHHHHHHHHHCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCC FTNMLDVSDYPMKLSSFFYSEANDGLVGKCSSHFGTVLRDNYDMNHLDEVNQVLGLTAFF HHHHHCCCCCCHHHHHHHHHCCCCCCEECCHHHHHHHHHCCCCCHHHHHHHHHHHHHHEE TNPKTVFRNHANRLKGLGL CCHHHHHHHHHHHHHCCCC >Mature Secondary Structure MDPSPEQEPLLMRNAVRTLVLAVAALGLWSQPALANTQTQTRYPIVLAHGMAGFDSLFGV CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHH YDYFYGIGSDLRSGGATVYVTSVPQFNTTEQRGEALLAQVKDIVARSGKGKVNLIGHSHG HHHHHHCCHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCC GLDVRYVAAVRPDLVASVTTVGSPHKGADLADYLRANLRGGSFTESVLAYFANNLGTVLG CCEEEEEEHHCCHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH LLSGKTNPQDAIGALAALSKSGTAAFNQKYPAGIPSSSCGQGAATGTQGQRYYSWSGTDP HHCCCCCHHHHHHHHHHHHCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCC FTNMLDVSDYPMKLSSFFYSEANDGLVGKCSSHFGTVLRDNYDMNHLDEVNQVLGLTAFF HHHHHCCCCCCHHHHHHHHHCCCCCCEECCHHHHHHHHHCCCCCHHHHHHHHHHHHHHEE TNPKTVFRNHANRLKGLGL CCHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1512563; 1632642; 1576157; 10984043; 1748875; 11133953 [H]