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The map label for this gene is yajC [C]

Identifier: 108563925

GI number: 108563925

Start: 1561977

End: 1562270

Strand: Reverse

Name: yajC [C]

Synonym: HPAG1_1500

Alternate gene names: 108563925

Gene position: 1562270-1561977 (Counterclockwise)

Preceding gene: 108563926

Following gene: 108563924

Centisome position: 97.86

GC content: 38.78

Gene sequence:

>294_bases
ATGGGACAAATTAGAGACATTCTAACGACGCTTTTACCCCTTGTGGTGTTGTTTCTTATTTTTTATTTTTTGATCGTTCG
CCCGCAACGCCAGCAACAAAAAAAGCACAAAGAAATGATAGAGGGTTTGACTAAGGGTGATAAAATCGTTACTCAAGGAG
GGCTCATCGTTGAGGTGCTTAAAGCGGAAGCGAATTTTTTTAGCGTGAAACTCAATGATGACACCACCGCTAAACTTTCT
AAAAACTATATAGCGTTCAAATTAGACGAAGAAACAACACCCAACAACAACTAA

Upstream 100 bases:

>100_bases
TAGGGGCTTTGTATTTATTTGCGCTAGACAAAAGAGCGGCTTTAAAGAAATAGTTAAAAATGCTATAATTTGAGCTTGAA
ACATCTTTTAAGGAAATTAA

Downstream 100 bases:

>100_bases
ATGAAACTTTTTAACGCTCGTTTAATCGTTTTTATTTGCGCGCTTCTTTTAGGGGTGGGGTTTTCTGTGCCTTCTTTGCT
AGAAACTAAAGGCCCTAAAA

Product: preprotein translocase subunit YajC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 97; Mature: 96

Protein sequence:

>97_residues
MGQIRDILTTLLPLVVLFLIFYFLIVRPQRQQQKKHKEMIEGLTKGDKIVTQGGLIVEVLKAEANFFSVKLNDDTTAKLS
KNYIAFKLDEETTPNNN

Sequences:

>Translated_97_residues
MGQIRDILTTLLPLVVLFLIFYFLIVRPQRQQQKKHKEMIEGLTKGDKIVTQGGLIVEVLKAEANFFSVKLNDDTTAKLS
KNYIAFKLDEETTPNNN
>Mature_96_residues
GQIRDILTTLLPLVVLFLIFYFLIVRPQRQQQKKHKEMIEGLTKGDKIVTQGGLIVEVLKAEANFFSVKLNDDTTAKLSK
NYIAFKLDEETTPNNN

Specific function: Unknown

COG id: COG1862

COG function: function code U; Preprotein translocase subunit YajC

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0092 family [H]

Homologues:

Organism=Escherichia coli, GI1786608, Length=86, Percent_Identity=39.5348837209302, Blast_Score=74, Evalue=2e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003849 [H]

Pfam domain/function: PF02699 YajC [H]

EC number: NA

Molecular weight: Translated: 11095; Mature: 10964

Theoretical pI: Translated: 9.61; Mature: 9.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGQIRDILTTLLPLVVLFLIFYFLIVRPQRQQQKKHKEMIEGLTKGDKIVTQGGLIVEVL
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCEEEECCCHHHHHH
KAEANFFSVKLNDDTTAKLSKNYIAFKLDEETTPNNN
HCCCCEEEEEECCCCCHHHCCCEEEEEECCCCCCCCC
>Mature Secondary Structure 
GQIRDILTTLLPLVVLFLIFYFLIVRPQRQQQKKHKEMIEGLTKGDKIVTQGGLIVEVL
CHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCEEEECCCHHHHHH
KAEANFFSVKLNDDTTAKLSKNYIAFKLDEETTPNNN
HCCCCEEEEEECCCCCHHHCCCEEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9923682 [H]