| Definition | Helicobacter pylori HPAG1 chromosome, complete genome. |
|---|---|
| Accession | NC_008086 |
| Length | 1,596,366 |
Click here to switch to the map view.
The map label for this gene is ppnK [H]
Identifier: 108563901
GI number: 108563901
Start: 1537852
End: 1538706
Strand: Direct
Name: ppnK [H]
Synonym: HPAG1_1476
Alternate gene names: 108563901
Gene position: 1537852-1538706 (Clockwise)
Preceding gene: 108563899
Following gene: 108563902
Centisome position: 96.33
GC content: 40.94
Gene sequence:
>855_bases ATGAAAGATTCATATCAAACTATCGGCGTGTTTGTGCGGCCTACCCATTATCAAAACCCCCTTTTTGAAGAGCTAGAGCA GGCTAAAGAATGGGTTTTAAAGCTTTTAGAAGATGAAGGGTTTGAAAGCTTTATGATTGATAGCCTTGATGGGGCAAAAG ATGCACGATTGATAGAAAAAGCTTATGCGTTTTTGTGTTTAGGGGGCGATGGCACGATTTTAGGGGCGTTAAGAATGACG CATTCTTACAATAAGCCGTGTTTTGGGGTTAGAATAGGGAATTTAGGGTTTTTGAGCGCGGTTGAATTGAATGGGTTGAA AGATTTCTTACAAGATCTCAAGCAAAACAGGATCAAATTAGAAGAACATCTGGCTTTAGAGGGCCGTATCGGGAAAACCT CTTTTTATGCGATCAATGAAATTGTGATCGCTAAAAAAAAAGCTTTAGGGGTTTTAGATATCAAAGCTTATGTGGGCCAT ACGCCCTTTAACACCTATAAAGGCGATGGGCTTATCATTGCCACGCCCCTAGGCTCGACCGCTTATAATTTGAGTGCTCA TGGGCCGATTGTGCATGCTTTAAGCCAAAGCTATATTTTAACGCCCTTGTGCGATTTTTCTTTAACGCAACGCCCTTTAG TGCTAGGAGCGGAATTTTGCTTGAATTTTTGCGCTCATGAAGATGCTCTTGTAGTCATTGATGGGCAAGCCACTTACGAT TTGAAAGCTAACCAACCCCTATACATTCAAAAAAGCCCCACGACCACCAAGCTCTTACAAAAAAATTCAAGGGATTATTT TAAAGTGCTTAAAGAAAAGCTCTTATGGGGGGAAAGCCCTAGCAAAAAAAGATAA
Upstream 100 bases:
>100_bases AAAATAAAAACTTCTTATGAATTCCACATAAGATGATAAAAAAGCGGCTAAAACCCACTTTTTTAAAATTTTGTTTCAAG CTTTAAGCTACAATATACGC
Downstream 100 bases:
>100_bases AAAGGGTAAAACATGCGAGATTTTAATAACGCTCAAATCACACGCTTAAAAGTGCGTCAAAACGCTGTTTTTGAAAAATT GGATTTGGAGTTTAAAGACG
Product: hypothetical protein
Products: NA
Alternate protein names: Poly(P)/ATP NAD kinase [H]
Number of amino acids: Translated: 284; Mature: 284
Protein sequence:
>284_residues MKDSYQTIGVFVRPTHYQNPLFEELEQAKEWVLKLLEDEGFESFMIDSLDGAKDARLIEKAYAFLCLGGDGTILGALRMT HSYNKPCFGVRIGNLGFLSAVELNGLKDFLQDLKQNRIKLEEHLALEGRIGKTSFYAINEIVIAKKKALGVLDIKAYVGH TPFNTYKGDGLIIATPLGSTAYNLSAHGPIVHALSQSYILTPLCDFSLTQRPLVLGAEFCLNFCAHEDALVVIDGQATYD LKANQPLYIQKSPTTTKLLQKNSRDYFKVLKEKLLWGESPSKKR
Sequences:
>Translated_284_residues MKDSYQTIGVFVRPTHYQNPLFEELEQAKEWVLKLLEDEGFESFMIDSLDGAKDARLIEKAYAFLCLGGDGTILGALRMT HSYNKPCFGVRIGNLGFLSAVELNGLKDFLQDLKQNRIKLEEHLALEGRIGKTSFYAINEIVIAKKKALGVLDIKAYVGH TPFNTYKGDGLIIATPLGSTAYNLSAHGPIVHALSQSYILTPLCDFSLTQRPLVLGAEFCLNFCAHEDALVVIDGQATYD LKANQPLYIQKSPTTTKLLQKNSRDYFKVLKEKLLWGESPSKKR >Mature_284_residues MKDSYQTIGVFVRPTHYQNPLFEELEQAKEWVLKLLEDEGFESFMIDSLDGAKDARLIEKAYAFLCLGGDGTILGALRMT HSYNKPCFGVRIGNLGFLSAVELNGLKDFLQDLKQNRIKLEEHLALEGRIGKTSFYAINEIVIAKKKALGVLDIKAYVGH TPFNTYKGDGLIIATPLGSTAYNLSAHGPIVHALSQSYILTPLCDFSLTQRPLVLGAEFCLNFCAHEDALVVIDGQATYD LKANQPLYIQKSPTTTKLLQKNSRDYFKVLKEKLLWGESPSKKR
Specific function: Catalyzes the phosphorylation of NAD to NADP. Utilizes ATP and other nucleoside triphosphates as well as inorganic polyphosphate as a source of phosphorus [H]
COG id: COG0061
COG function: function code G; Predicted sugar kinase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the NAD kinase family [H]
Homologues:
Organism=Homo sapiens, GI55743112, Length=250, Percent_Identity=25.2, Blast_Score=75, Evalue=9e-14, Organism=Escherichia coli, GI1788968, Length=291, Percent_Identity=26.4604810996564, Blast_Score=107, Evalue=1e-24, Organism=Saccharomyces cerevisiae, GI6320794, Length=244, Percent_Identity=24.5901639344262, Blast_Score=97, Evalue=4e-21, Organism=Saccharomyces cerevisiae, GI6325068, Length=222, Percent_Identity=28.8288288288288, Blast_Score=89, Evalue=1e-18, Organism=Saccharomyces cerevisiae, GI6322509, Length=237, Percent_Identity=25.7383966244726, Blast_Score=84, Evalue=3e-17, Organism=Drosophila melanogaster, GI28573832, Length=276, Percent_Identity=27.1739130434783, Blast_Score=82, Evalue=4e-16, Organism=Drosophila melanogaster, GI28573828, Length=262, Percent_Identity=27.4809160305344, Blast_Score=82, Evalue=5e-16, Organism=Drosophila melanogaster, GI28573826, Length=268, Percent_Identity=27.2388059701493, Blast_Score=82, Evalue=5e-16, Organism=Drosophila melanogaster, GI28573830, Length=282, Percent_Identity=26.9503546099291, Blast_Score=82, Evalue=5e-16, Organism=Drosophila melanogaster, GI161077047, Length=262, Percent_Identity=27.4809160305344, Blast_Score=82, Evalue=6e-16, Organism=Drosophila melanogaster, GI20129957, Length=281, Percent_Identity=24.5551601423488, Blast_Score=70, Evalue=2e-12, Organism=Drosophila melanogaster, GI281363321, Length=281, Percent_Identity=24.5551601423488, Blast_Score=70, Evalue=2e-12, Organism=Drosophila melanogaster, GI24653424, Length=287, Percent_Identity=24.390243902439, Blast_Score=69, Evalue=2e-12, Organism=Drosophila melanogaster, GI281363323, Length=282, Percent_Identity=24.468085106383, Blast_Score=69, Evalue=2e-12, Organism=Drosophila melanogaster, GI24653422, Length=287, Percent_Identity=24.390243902439, Blast_Score=69, Evalue=3e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016064 - InterPro: IPR017438 - InterPro: IPR017437 - InterPro: IPR002504 [H]
Pfam domain/function: PF01513 NAD_kinase [H]
EC number: =2.7.1.23 [H]
Molecular weight: Translated: 31724; Mature: 31724
Theoretical pI: Translated: 7.90; Mature: 7.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKDSYQTIGVFVRPTHYQNPLFEELEQAKEWVLKLLEDEGFESFMIDSLDGAKDARLIEK CCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHH AYAFLCLGGDGTILGALRMTHSYNKPCFGVRIGNLGFLSAVELNGLKDFLQDLKQNRIKL HEEEEEECCCCEEEEEEEHHCCCCCCEEEEEECCCCEEEHEECCCHHHHHHHHHHHHHHH EEHLALEGRIGKTSFYAINEIVIAKKKALGVLDIKAYVGHTPFNTYKGDGLIIATPLGST HHHEEECCCCCCCHHHHHHHHEEEHHHHCCEEEEHHHHCCCCCCCCCCCCEEEEECCCCC AYNLSAHGPIVHALSQSYILTPLCDFSLTQRPLVLGAEFCLNFCAHEDALVVIDGQATYD EEECCCCCHHHHHHCCCEEECCCCCCCCCCCCCEEEHHHHHHHHCCCCCEEEECCCEEEE LKANQPLYIQKSPTTTKLLQKNSRDYFKVLKEKLLWGESPSKKR ECCCCCEEEECCCCHHHHHHCCCHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MKDSYQTIGVFVRPTHYQNPLFEELEQAKEWVLKLLEDEGFESFMIDSLDGAKDARLIEK CCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHH AYAFLCLGGDGTILGALRMTHSYNKPCFGVRIGNLGFLSAVELNGLKDFLQDLKQNRIKL HEEEEEECCCCEEEEEEEHHCCCCCCEEEEEECCCCEEEHEECCCHHHHHHHHHHHHHHH EEHLALEGRIGKTSFYAINEIVIAKKKALGVLDIKAYVGHTPFNTYKGDGLIIATPLGST HHHEEECCCCCCCHHHHHHHHEEEHHHHCCEEEEHHHHCCCCCCCCCCCCEEEEECCCCC AYNLSAHGPIVHALSQSYILTPLCDFSLTQRPLVLGAEFCLNFCAHEDALVVIDGQATYD EEECCCCCHHHHHHCCCEEECCCCCCCCCCCCCEEEHHHHHHHHCCCCCEEEECCCEEEE LKANQPLYIQKSPTTTKLLQKNSRDYFKVLKEKLLWGESPSKKR ECCCCCEEEECCCCHHHHHHCCCHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA