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The map label for this gene is 108563900

Identifier: 108563900

GI number: 108563900

Start: 1536937

End: 1537665

Strand: Reverse

Name: 108563900

Synonym: HPAG1_1475

Alternate gene names: NA

Gene position: 1537665-1536937 (Counterclockwise)

Preceding gene: 108563906

Following gene: 108563896

Centisome position: 96.32

GC content: 41.84

Gene sequence:

>729_bases
ATGAAGAAATTTTTTTCTCAATCTTTATTAGCTTTGATTGCTTCTATGAACGCGCTATTAGCCATGGATGGCAATGGCGT
TTTTATAGGGGCGGGTTATTTGCAAGGACAAGCCCAAATGCATGCGGATATTAATTCTCAAAAACAAGCCACTAACGCTA
CTATCAAGGGGTTTGATGCGCTTTTAGGGTATCAGTTTTTCTTTGGGAAATACTTTGGCTTACGCCTTTATGGGTTTTTT
GACTACGCTCATGCCAATTCTATTAAGCTTAAAAACCCTAATTATAACAGCGAAGCGGCGCAATTGGCGGGTCAAATTCT
TGGGAAACAAGAAATCAATCGTTTAACGAGCCTTGCTGATCCTAAAACCTTTGAGCCAAACATGCTCACTTATGGGGGGG
CTATGGATGTGATGGTTAATGTCATCAATAACGGCATCATGAGTTTGGGGGCTTTTGGCGGGATACAATTGGCCGGCAAT
TCATGGCTTATGGCGACACCGAGCTTTGAGGGTATTTTAGTGGAGCAAGCTTTGGTGAGCAAAAAGGCCACTTCTTTCCA
ATTTTTATTCAATGTGGGGGCTCGCTTAAGGATCTTAAAACATTCTAGCATTGAAGCGGGCGTGAAATTCCCTATGCTAA
AGAAAAACCCCTACATCACTGCAAAAAACTTGGATATAGGGTTTAGACGCGTGTATTCGTGGTATGTGAATTACGTGTTC
ACTTTCTAG

Upstream 100 bases:

>100_bases
GAAGTTTTTATTTTGATTAATGTTTCATTTTTTAAACTTTTTTAATTGTTTTTTGGGTATTCTTTTTAAGTAACAAAAAA
TTATTTTTAAGGAATCATAA

Downstream 100 bases:

>100_bases
GGGCACGTCCCTAGAGTTCAAGCACACTCTCAATGATTTTAATCAGCTCTTCTTTTCTTTTTTCTAAGCTTTTGGGCGTC
CATTCTGTGTATTGTGCAAC

Product: outer membrane protein HorL

Products: NA

Alternate protein names: Outer Membrane Protein HopQ; Outer Membrane Protein HopZ; Outer Membrane Protein HorE; Outer Membrane Protein/Porin; Outer Membrane Protein HopW Protein (; Outer Membrane Protein HorC; Outer Membrane Protein HorJ; Outer Membrane Protein SabB/HopO; Outer Membrane Protein,HopV SabB SabA; Outer Membrane Protein HopA; Outer Membrane Protein BabA; Outer Membrane Protein HopD; Outer Membrane Protein ,Adhesin BabA BabB; Outer Membrane Protein Omp; Outer Membrane Function; Outer Membrane Protein HopB; Adhesin; Outer Membrane Protein HorF; Outer Membrane Protein HopE; Outer Membrane Protein HorL; Outer Membrane Protein,HopV BabB BabA; Outer Membrane Protein HopG

Number of amino acids: Translated: 242; Mature: 242

Protein sequence:

>242_residues
MKKFFSQSLLALIASMNALLAMDGNGVFIGAGYLQGQAQMHADINSQKQATNATIKGFDALLGYQFFFGKYFGLRLYGFF
DYAHANSIKLKNPNYNSEAAQLAGQILGKQEINRLTSLADPKTFEPNMLTYGGAMDVMVNVINNGIMSLGAFGGIQLAGN
SWLMATPSFEGILVEQALVSKKATSFQFLFNVGARLRILKHSSIEAGVKFPMLKKNPYITAKNLDIGFRRVYSWYVNYVF
TF

Sequences:

>Translated_242_residues
MKKFFSQSLLALIASMNALLAMDGNGVFIGAGYLQGQAQMHADINSQKQATNATIKGFDALLGYQFFFGKYFGLRLYGFF
DYAHANSIKLKNPNYNSEAAQLAGQILGKQEINRLTSLADPKTFEPNMLTYGGAMDVMVNVINNGIMSLGAFGGIQLAGN
SWLMATPSFEGILVEQALVSKKATSFQFLFNVGARLRILKHSSIEAGVKFPMLKKNPYITAKNLDIGFRRVYSWYVNYVF
TF
>Mature_242_residues
MKKFFSQSLLALIASMNALLAMDGNGVFIGAGYLQGQAQMHADINSQKQATNATIKGFDALLGYQFFFGKYFGLRLYGFF
DYAHANSIKLKNPNYNSEAAQLAGQILGKQEINRLTSLADPKTFEPNMLTYGGAMDVMVNVINNGIMSLGAFGGIQLAGN
SWLMATPSFEGILVEQALVSKKATSFQFLFNVGARLRILKHSSIEAGVKFPMLKKNPYITAKNLDIGFRRVYSWYVNYVF
TF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26758; Mature: 26758

Theoretical pI: Translated: 10.09; Mature: 10.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKFFSQSLLALIASMNALLAMDGNGVFIGAGYLQGQAQMHADINSQKQATNATIKGFDA
CCHHHHHHHHHHHHHCCEEEEECCCEEEEECCEECCCHHEECCCCCCHHHCCCHHHHHHH
LLGYQFFFGKYFGLRLYGFFDYAHANSIKLKNPNYNSEAAQLAGQILGKQEINRLTSLAD
HHHHHHHHHHHHHEEEEEEEEECCCCEEEECCCCCCHHHHHHHHHHHCHHHHHHHHHCCC
PKTFEPNMLTYGGAMDVMVNVINNGIMSLGAFGGIQLAGNSWLMATPSFEGILVEQALVS
CCCCCCCCEEECCHHHHHHHHHHHHHHHHCCCCCEEECCCCEEEECCCCCCHHHHHHHHH
KKATSFQFLFNVGARLRILKHSSIEAGVKFPMLKKNPYITAKNLDIGFRRVYSWYVNYVF
HHCCHHHHEECCCCEEEEEECCCCCCCCCCCEECCCCEEEEECCCHHHHHHHHHHHHHHE
TF
EC
>Mature Secondary Structure
MKKFFSQSLLALIASMNALLAMDGNGVFIGAGYLQGQAQMHADINSQKQATNATIKGFDA
CCHHHHHHHHHHHHHCCEEEEECCCEEEEECCEECCCHHEECCCCCCHHHCCCHHHHHHH
LLGYQFFFGKYFGLRLYGFFDYAHANSIKLKNPNYNSEAAQLAGQILGKQEINRLTSLAD
HHHHHHHHHHHHHEEEEEEEEECCCCEEEECCCCCCHHHHHHHHHHHCHHHHHHHHHCCC
PKTFEPNMLTYGGAMDVMVNVINNGIMSLGAFGGIQLAGNSWLMATPSFEGILVEQALVS
CCCCCCCCEEECCHHHHHHHHHHHHHHHHCCCCCEEECCCCEEEECCCCCCHHHHHHHHH
KKATSFQFLFNVGARLRILKHSSIEAGVKFPMLKKNPYITAKNLDIGFRRVYSWYVNYVF
HHCCHHHHEECCCCEEEEEECCCCCCCCCCCEECCCCEEEEECCCHHHHHHHHHHHHHHE
TF
EC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA