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The map label for this gene is 108563849

Identifier: 108563849

GI number: 108563849

Start: 1481620

End: 1483152

Strand: Direct

Name: 108563849

Synonym: HPAG1_1424

Alternate gene names: NA

Gene position: 1481620-1483152 (Clockwise)

Preceding gene: 108563848

Following gene: 108563850

Centisome position: 92.81

GC content: 40.64

Gene sequence:

>1533_bases
ATGAAAAAAACAACCCTCTTTGTATTGGGCTTATTATTCAATAGCTCTTTAAGCGCTGTTGATGGAGTTTCTAAAACCGA
GCCTTCTTCTTTGAATTTGGCTGAAGACAGCGCGCCTTTGAACCATCCTGACGCTCAAAAACTCTCTTTAAAAAACGCAT
GGACTAGGGTATTATCCAACCATGAAGGCTTGCATGCGCAAGAATACGCCATTAAAAGAGCGAGTAAAATGAAATTAGCG
GCTAAACTTTCTTTTTTGCCTCAAATTGATTTGAGCGCTTTTTATGTGTACCTCTCTAACCCTATTAAAATGGATTTTGC
CAGCCAAAAACAACCGGGCGTGCAAAAAGCCACCAACCAGATCCATCAAGGCATACAAAACATCCAGCAAAATATCCCCC
CTCAAGTATTAACCCCTCAAATCCAAGCGGGCATGCAAGGGGTGATGCAAGGTTTTGGGGCTTTGAGCAGCACTTTAGAA
GCCCCCTTATTGTTTTCTAAGCAAAATGTGGTGATTGGGGCTTTGAGCATTATTTATCCCCTTTATATGGGTGGGGCAAG
ATTCACGATGGTGCGCATTGCGGATTTGATGCAAAAAGACGCCAATGAAGTGTATCGTTTGAAAAAGCTTTCCACTTTTC
AAGAGCTTGTGAGCGTGTATTATGGCATGGTGTTAAACGCAGAAGTGGCTGAAACTTTAGAAGAAGTGGAAAAAGGCCAT
TATAAGCATTTCCAAAACGCTTTAAAAATGCAAAAAGTAGGGCAAATCGCTAGGGTAGAAACCTTAGGCGCTCAAGTGGC
TTATGATAAGGCCCATATCGCTAGCGTTAAGGCTAAAGACGTGTTAGAAGTTTCGCAGCTCTCGTTCAATTCTATTTTGT
CTAGTAAAGACGATCTAGCGCCTTCAAGCAAATTAGAGATTCGCACAGAGAAAAATCTGCCCGATTTGAGCTTTTTTGTT
GCTTCCACGCTCAATTCTTACCCGGTTTTAAAGACTTTAGAAAATCAGATTCAAATTTCTAAAGAAAACACCAAACTTCA
GATCGCTAAATTCTTGCCCCAAGTGAGTTTTTTTGGATCTTATATCATGAAACAAAACAATTCGGTGTTTGAAGACATGA
TCCCTAGCTGGTTTGTGGGCGTGGCGGGGCGTATGCCCATACTCTCCCCCACAGGGCGTTTCCAAAAATACCAAGCGAGC
AAATTAGCGGAGTTGCAAGCTAGTAGCGAGCAAATCCAGGCTAAAAAAAACATGGAATTGTTGGTGAATAAGACTTATAA
AGAGACGCTTTCTTATTTGAAAGAATACAAAAGCTTGCTTTCTAGCGTGGAATTAGCCAAGGAAAATTTAAAACTCCAAG
AGCAGGCTTTTTTACAAGGCTTAAGCACGAACGCTCAAGTCATTGATGCGAGGAACACGCTTTCTTCTATCATCGTGGAG
CAAAAAAGCGTGGCTTATAAATACATCGTTTCATTAGCGAATTTAATGGCGTTAAGCGATCATATTGATTTATTTTATGA
ATTTGTTTATTAA

Upstream 100 bases:

>100_bases
TTCGCATGGGTATGCCTTTGAAGTCTTAAGCGTGGATGGGGCTAGGATAAAACGCTTAAAAGCGAGTAAAGAAAATAAGG
ATTAGGATAAAGGAATGAGC

Downstream 100 bases:

>100_bases
AGGAAAAAATCATGTCAAATAGCATGTTGGATAAAAATAAAGCGATTCTTACAGGGGGTGGGGCTTTATTATTAGGGCTA
ATCGTGCTTTTTTATTTAGC

Product: lipase-like protein

Products: NA

Alternate protein names: Outer Membrane Protein; Outer Membrane Efflux Family Protein; RND Family Drug Transporter; Outer Membrane Efflux Protein Domain Protein; Type I Secretion Outer Membrane Protein

Number of amino acids: Translated: 510; Mature: 510

Protein sequence:

>510_residues
MKKTTLFVLGLLFNSSLSAVDGVSKTEPSSLNLAEDSAPLNHPDAQKLSLKNAWTRVLSNHEGLHAQEYAIKRASKMKLA
AKLSFLPQIDLSAFYVYLSNPIKMDFASQKQPGVQKATNQIHQGIQNIQQNIPPQVLTPQIQAGMQGVMQGFGALSSTLE
APLLFSKQNVVIGALSIIYPLYMGGARFTMVRIADLMQKDANEVYRLKKLSTFQELVSVYYGMVLNAEVAETLEEVEKGH
YKHFQNALKMQKVGQIARVETLGAQVAYDKAHIASVKAKDVLEVSQLSFNSILSSKDDLAPSSKLEIRTEKNLPDLSFFV
ASTLNSYPVLKTLENQIQISKENTKLQIAKFLPQVSFFGSYIMKQNNSVFEDMIPSWFVGVAGRMPILSPTGRFQKYQAS
KLAELQASSEQIQAKKNMELLVNKTYKETLSYLKEYKSLLSSVELAKENLKLQEQAFLQGLSTNAQVIDARNTLSSIIVE
QKSVAYKYIVSLANLMALSDHIDLFYEFVY

Sequences:

>Translated_510_residues
MKKTTLFVLGLLFNSSLSAVDGVSKTEPSSLNLAEDSAPLNHPDAQKLSLKNAWTRVLSNHEGLHAQEYAIKRASKMKLA
AKLSFLPQIDLSAFYVYLSNPIKMDFASQKQPGVQKATNQIHQGIQNIQQNIPPQVLTPQIQAGMQGVMQGFGALSSTLE
APLLFSKQNVVIGALSIIYPLYMGGARFTMVRIADLMQKDANEVYRLKKLSTFQELVSVYYGMVLNAEVAETLEEVEKGH
YKHFQNALKMQKVGQIARVETLGAQVAYDKAHIASVKAKDVLEVSQLSFNSILSSKDDLAPSSKLEIRTEKNLPDLSFFV
ASTLNSYPVLKTLENQIQISKENTKLQIAKFLPQVSFFGSYIMKQNNSVFEDMIPSWFVGVAGRMPILSPTGRFQKYQAS
KLAELQASSEQIQAKKNMELLVNKTYKETLSYLKEYKSLLSSVELAKENLKLQEQAFLQGLSTNAQVIDARNTLSSIIVE
QKSVAYKYIVSLANLMALSDHIDLFYEFVY
>Mature_510_residues
MKKTTLFVLGLLFNSSLSAVDGVSKTEPSSLNLAEDSAPLNHPDAQKLSLKNAWTRVLSNHEGLHAQEYAIKRASKMKLA
AKLSFLPQIDLSAFYVYLSNPIKMDFASQKQPGVQKATNQIHQGIQNIQQNIPPQVLTPQIQAGMQGVMQGFGALSSTLE
APLLFSKQNVVIGALSIIYPLYMGGARFTMVRIADLMQKDANEVYRLKKLSTFQELVSVYYGMVLNAEVAETLEEVEKGH
YKHFQNALKMQKVGQIARVETLGAQVAYDKAHIASVKAKDVLEVSQLSFNSILSSKDDLAPSSKLEIRTEKNLPDLSFFV
ASTLNSYPVLKTLENQIQISKENTKLQIAKFLPQVSFFGSYIMKQNNSVFEDMIPSWFVGVAGRMPILSPTGRFQKYQAS
KLAELQASSEQIQAKKNMELLVNKTYKETLSYLKEYKSLLSSVELAKENLKLQEQAFLQGLSTNAQVIDARNTLSSIIVE
QKSVAYKYIVSLANLMALSDHIDLFYEFVY

Specific function: Unknown

COG id: COG1538

COG function: function code MU; Outer membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 56896; Mature: 56896

Theoretical pI: Translated: 9.58; Mature: 9.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure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HHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA