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The map label for this gene is 108563840

Identifier: 108563840

GI number: 108563840

Start: 1472943

End: 1474010

Strand: Reverse

Name: 108563840

Synonym: HPAG1_1415

Alternate gene names: NA

Gene position: 1474010-1472943 (Counterclockwise)

Preceding gene: 108563841

Following gene: 108563839

Centisome position: 92.34

GC content: 37.27

Gene sequence:

>1068_bases
GTGCGTTTGTTTAGATTTGTGGGGTGGTATTATTTCAAATACTTTTTAATCGTGCTTTTAGCTTTAGAATTGTTTTTTGT
AGGCATTGACAGCCTGAAATACGCCGATAAAATGCCCGATTCTGCGAACATGATCATTTTATTTTTCACCTATGACATCT
TATTCGCCCTCAATTACACCTTGCCCATTTCCTTGCTTTTGGCGATGGTTTTATTTTATATCTCATTCATTAAATCCAAC
CAATACACCGCCCTGCTCTCCATTGGCTTTTCCAAATGCCAGATTTTAAGCCCTATTTTTTTGATTAGCCTGTTTTTCAC
GGCTGTTTATGTGGGGTTGAACGCGACTCCTTTTGTGTATATGGAGGAAAAAACGCAAAATTTAATCTATAAAGACAATT
CTTTGAGCGTCTCAGAGCATTTGTTAGTGAAATATAACGATGATTACGTGTATTTTGATAAGATTAATCCCTTATTGCAA
AAAGCCCAAAATATCAAGGTGTTTCGCTTAAAAGATAGGACTTTAGAATCTTATGCTGAAGCTAAAGAAGCTTTTTTTGA
AGACAAGTATTGGATTTTGCATGACACTACTATCTATGAGATGCCCTTAAAATTTGAACTGGGCACAAACGCTTTAAACG
CCACGCGTTTAAAAACCTTTAAAACGCTCAAAAATTTCCGCCCTAAAGTTTTAGACACCATTTATCAAAACAAGCCCGCG
GTTTCTATCACAGACGCTCTTTTATCCTTGCATGCTTTAGTGCGCCAAAACGCAGACACGAAAAAAGTGCGCTCGTTTTT
GTATGTGTTTGCGATTTTGCCCTTTTTTGTGCCGTTTTTAAGCGTTTTAATCGCTTATTTTTCACCCAGTCTCGCCCGCT
ATGAAAACCTAGCTCTTTTAGGGCTAAAATTTATCATTATCACGCTCGTTGTTTGGGGGCTATTCTTTGCTTTAGGGAAG
TTCAGCATTTCAGGGATACTCATTCCTGAAATAGGCGTGCTATCGCCCTTTTTTATATTCTTAGCTCTTAGTCTTTGGTA
TTTTAAAAAGCTTAATAAGAGATTGTGA

Upstream 100 bases:

>100_bases
GCAAAATCGTTTCACGCTTAAAAAACCTTTAAAAATAGAAAGTTAAATGCGCTCTATCAAAAATTTTAAGTTTTTATCGT
GGTTTGAATAAGGGTTTAAA

Downstream 100 bases:

>100_bases
TTTTTAAATCTTATATGTTACTAAGTGGTTTTATTCTCTTAGTTTAAAGGTGGCTAGTGGAAAAATTTAATCTAAAAAAC
CGCCGGTATATCGTCTCAAA

Product: hypothetical protein

Products: NA

Alternate protein names: Permease YjgP/YjgQ Family Protein; Inner Membrane Protein OxaA; Permease; Permease Yjgp/Yjgq Family Protein; Methionyl-TRNA Formyltransferase; Integral Membrane Protein Permease YjgP/YjgQ; TRNA-I(6)A37 Thiotransferase MiaB

Number of amino acids: Translated: 355; Mature: 355

Protein sequence:

>355_residues
MRLFRFVGWYYFKYFLIVLLALELFFVGIDSLKYADKMPDSANMIILFFTYDILFALNYTLPISLLLAMVLFYISFIKSN
QYTALLSIGFSKCQILSPIFLISLFFTAVYVGLNATPFVYMEEKTQNLIYKDNSLSVSEHLLVKYNDDYVYFDKINPLLQ
KAQNIKVFRLKDRTLESYAEAKEAFFEDKYWILHDTTIYEMPLKFELGTNALNATRLKTFKTLKNFRPKVLDTIYQNKPA
VSITDALLSLHALVRQNADTKKVRSFLYVFAILPFFVPFLSVLIAYFSPSLARYENLALLGLKFIIITLVVWGLFFALGK
FSISGILIPEIGVLSPFFIFLALSLWYFKKLNKRL

Sequences:

>Translated_355_residues
MRLFRFVGWYYFKYFLIVLLALELFFVGIDSLKYADKMPDSANMIILFFTYDILFALNYTLPISLLLAMVLFYISFIKSN
QYTALLSIGFSKCQILSPIFLISLFFTAVYVGLNATPFVYMEEKTQNLIYKDNSLSVSEHLLVKYNDDYVYFDKINPLLQ
KAQNIKVFRLKDRTLESYAEAKEAFFEDKYWILHDTTIYEMPLKFELGTNALNATRLKTFKTLKNFRPKVLDTIYQNKPA
VSITDALLSLHALVRQNADTKKVRSFLYVFAILPFFVPFLSVLIAYFSPSLARYENLALLGLKFIIITLVVWGLFFALGK
FSISGILIPEIGVLSPFFIFLALSLWYFKKLNKRL
>Mature_355_residues
MRLFRFVGWYYFKYFLIVLLALELFFVGIDSLKYADKMPDSANMIILFFTYDILFALNYTLPISLLLAMVLFYISFIKSN
QYTALLSIGFSKCQILSPIFLISLFFTAVYVGLNATPFVYMEEKTQNLIYKDNSLSVSEHLLVKYNDDYVYFDKINPLLQ
KAQNIKVFRLKDRTLESYAEAKEAFFEDKYWILHDTTIYEMPLKFELGTNALNATRLKTFKTLKNFRPKVLDTIYQNKPA
VSITDALLSLHALVRQNADTKKVRSFLYVFAILPFFVPFLSVLIAYFSPSLARYENLALLGLKFIIITLVVWGLFFALGK
FSISGILIPEIGVLSPFFIFLALSLWYFKKLNKRL

Specific function: Unknown

COG id: COG0795

COG function: function code R; Predicted permeases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41307; Mature: 41307

Theoretical pI: Translated: 9.76; Mature: 9.76

Prosite motif: PS00962 RIBOSOMAL_S2_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLFRFVGWYYFKYFLIVLLALELFFVGIDSLKYADKMPDSANMIILFFTYDILFALNYT
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHH
LPISLLLAMVLFYISFIKSNQYTALLSIGFSKCQILSPIFLISLFFTAVYVGLNATPFVY
HHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEE
MEEKTQNLIYKDNSLSVSEHLLVKYNDDYVYFDKINPLLQKAQNIKVFRLKDRTLESYAE
EECCCCCEEEECCCCCCCCEEEEEECCCEEEEECCCHHHHHHCCCEEEEECHHHHHHHHH
AKEAFFEDKYWILHDTTIYEMPLKFELGTNALNATRLKTFKTLKNFRPKVLDTIYQNKPA
HHHHHHCCCEEEEECCEEEECCEEEEECCCCCCHHHHHHHHHHHHCCHHHHHHHHCCCCC
VSITDALLSLHALVRQNADTKKVRSFLYVFAILPFFVPFLSVLIAYFSPSLARYENLALL
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
GLKFIIITLVVWGLFFALGKFSISGILIPEIGVLSPFFIFLALSLWYFKKLNKRL
HHHHHHHHHHHHHHHHHHHHHCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MRLFRFVGWYYFKYFLIVLLALELFFVGIDSLKYADKMPDSANMIILFFTYDILFALNYT
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHH
LPISLLLAMVLFYISFIKSNQYTALLSIGFSKCQILSPIFLISLFFTAVYVGLNATPFVY
HHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEE
MEEKTQNLIYKDNSLSVSEHLLVKYNDDYVYFDKINPLLQKAQNIKVFRLKDRTLESYAE
EECCCCCEEEECCCCCCCCEEEEEECCCEEEEECCCHHHHHHCCCEEEEECHHHHHHHHH
AKEAFFEDKYWILHDTTIYEMPLKFELGTNALNATRLKTFKTLKNFRPKVLDTIYQNKPA
HHHHHHCCCEEEEECCEEEECCEEEEECCCCCCHHHHHHHHHHHHCCHHHHHHHHCCCCC
VSITDALLSLHALVRQNADTKKVRSFLYVFAILPFFVPFLSVLIAYFSPSLARYENLALL
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
GLKFIIITLVVWGLFFALGKFSISGILIPEIGVLSPFFIFLALSLWYFKKLNKRL
HHHHHHHHHHHHHHHHHHHHHCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA