Click here to switch to the map view.

The map label for this gene is 108563815

Identifier: 108563815

GI number: 108563815

Start: 1439646

End: 1440281

Strand: Reverse

Name: 108563815

Synonym: HPAG1_1390

Alternate gene names: NA

Gene position: 1440281-1439646 (Counterclockwise)

Preceding gene: 108563816

Following gene: 108563811

Centisome position: 90.22

GC content: 39.15

Gene sequence:

>636_bases
GTGAAATTTTTTTCAAAGGATTTATTTAAAAAAGTAACCCCCTTATTTTTAAGCGTTTATTTTTTAAACCCTACCCTTAC
GCAAGCTAAAAGCCGTTTTTATGTGGCTTCTCAATACCAGGTGGGGAAAATGATCATGAAAAAATACAACGATCTCAAAC
GCACGATTGAAGGGGCGAGCTTTTCTTTAGGCTGGGAGATTAACCCCACTAACTACTGGTTTTATTCGCGCTATTACTTT
TTTATGGATTATGGGAATGTCATTCTCAATAAAAGAACGGGCGCTCAAGCGAACATGTTCACTTACGGCTTTGGAGGGGA
TTTGATCGTAGAATACAATAAAAACCCCTTGTATGTATTTTCTCTTTTTTATGGCATGCAAGTTGCCGAAAACACATGGA
CGATTTCCAAACACAGCGCGAATTTCATCATTGACGACTGGCGCAGCATTCAAGGGTTTTCGCTCAAAACTTCAAATTTC
AGGATGTTGGGTTTAGTGGGGTTTAAATTCCAAACCGTGCTATTCCACCATGACGCTAGTATTGAAGTGGGGATCAAATG
GCCTTTCGCTTTTGAATACGACTCACCCTTTGTAAGGCTTTTTTCTGTCTTTATTTCGCACACTTTCTACCTTTAA

Upstream 100 bases:

>100_bases
AAACGCTGATCCTTCGCAAAAAAGAACGAACAACGTTTTGCAACGAGCCACTAACCACCAAGACAATCTCAACTCCCCAC
TCAACAGGAAGTATTAAAGT

Downstream 100 bases:

>100_bases
ACTAATTCCAACCCCACCGGGCAATGATCGCTCCCTAAAATATCTTTATAGATTAAAGCGTCTTTTAAGCGCGTTTTTAA
AGGATTAGAGCATAGAAAAT

Product: hypothetical protein

Products: NA

Alternate protein names: Outer Membrane Protein; Outer Membrane Protein HopB

Number of amino acids: Translated: 211; Mature: 211

Protein sequence:

>211_residues
MKFFSKDLFKKVTPLFLSVYFLNPTLTQAKSRFYVASQYQVGKMIMKKYNDLKRTIEGASFSLGWEINPTNYWFYSRYYF
FMDYGNVILNKRTGAQANMFTYGFGGDLIVEYNKNPLYVFSLFYGMQVAENTWTISKHSANFIIDDWRSIQGFSLKTSNF
RMLGLVGFKFQTVLFHHDASIEVGIKWPFAFEYDSPFVRLFSVFISHTFYL

Sequences:

>Translated_211_residues
MKFFSKDLFKKVTPLFLSVYFLNPTLTQAKSRFYVASQYQVGKMIMKKYNDLKRTIEGASFSLGWEINPTNYWFYSRYYF
FMDYGNVILNKRTGAQANMFTYGFGGDLIVEYNKNPLYVFSLFYGMQVAENTWTISKHSANFIIDDWRSIQGFSLKTSNF
RMLGLVGFKFQTVLFHHDASIEVGIKWPFAFEYDSPFVRLFSVFISHTFYL
>Mature_211_residues
MKFFSKDLFKKVTPLFLSVYFLNPTLTQAKSRFYVASQYQVGKMIMKKYNDLKRTIEGASFSLGWEINPTNYWFYSRYYF
FMDYGNVILNKRTGAQANMFTYGFGGDLIVEYNKNPLYVFSLFYGMQVAENTWTISKHSANFIIDDWRSIQGFSLKTSNF
RMLGLVGFKFQTVLFHHDASIEVGIKWPFAFEYDSPFVRLFSVFISHTFYL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24896; Mature: 24896

Theoretical pI: Translated: 9.86; Mature: 9.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFFSKDLFKKVTPLFLSVYFLNPTLTQAKSRFYVASQYQVGKMIMKKYNDLKRTIEGAS
CCCHHHHHHHHHHHHEEEEEEECCCHHHHCCEEEEECCHHHHHHHHHHHHHHHHHHCCCC
FSLGWEINPTNYWFYSRYYFFMDYGNVILNKRTGAQANMFTYGFGGDLIVEYNKNPLYVF
EEEEEEECCCEEEEEEEEEEEEEECCEEEECCCCCCCCEEEEECCCCEEEEECCCCEEEE
SLFYGMQVAENTWTISKHSANFIIDDWRSIQGFSLKTSNFRMLGLVGFKFQTVLFHHDAS
EEECCCEECCCEEEEEECCCCEEEECCCCCCCEEEECCCEEEEEEECEEEEEEEEEECCC
IEVGIKWPFAFEYDSPFVRLFSVFISHTFYL
EEEEEECCEEEECCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKFFSKDLFKKVTPLFLSVYFLNPTLTQAKSRFYVASQYQVGKMIMKKYNDLKRTIEGAS
CCCHHHHHHHHHHHHEEEEEEECCCHHHHCCEEEEECCHHHHHHHHHHHHHHHHHHCCCC
FSLGWEINPTNYWFYSRYYFFMDYGNVILNKRTGAQANMFTYGFGGDLIVEYNKNPLYVF
EEEEEEECCCEEEEEEEEEEEEEECCEEEECCCCCCCCEEEEECCCCEEEEECCCCEEEE
SLFYGMQVAENTWTISKHSANFIIDDWRSIQGFSLKTSNFRMLGLVGFKFQTVLFHHDAS
EEECCCEECCCEEEEEECCCCEEEECCCCCCCEEEECCCEEEEEEECEEEEEEEEEECCC
IEVGIKWPFAFEYDSPFVRLFSVFISHTFYL
EEEEEECCEEEECCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA