Definition Helicobacter pylori HPAG1 chromosome, complete genome.
Accession NC_008086
Length 1,596,366

Click here to switch to the map view.

The map label for this gene is 108563811

Identifier: 108563811

GI number: 108563811

Start: 1434995

End: 1435537

Strand: Reverse

Name: 108563811

Synonym: HPAG1_1386

Alternate gene names: NA

Gene position: 1435537-1434995 (Counterclockwise)

Preceding gene: 108563815

Following gene: 108563810

Centisome position: 89.93

GC content: 38.49

Gene sequence:

>543_bases
ATGCTGCTTTGCGCTGGAAGGAATGAAACTTTAAAAGGGGCGACGCCTATTGGTGTGGGTTTGATAGGAAGTGCGATTAA
TTTAACGAGAATGTGCCTAAAAAACCCTGATACAGAAAGCCTTATTTTTATAGGGAGCGCGGGGAGTTATAGCCCAGAAA
TGGAGCTTTTAAGCGTGTTTGAAAGCGTTTGTGGCTATCAAATTGAAGAGAGTTTTAGCCATTTAAACAGCTACACGCCT
TTGGATAATTTTATTCAAATAGAAACCAAAGAGGAGGCTCTTTTTGAAAGGGTGGGCGTGAATAGCAGTAACTATATCCA
CACCAGCGAAATGTTTGCTAAAAAAATGGCTCAAAAGGGCGTTTTATTAGAAAACATGGAGTTTTTTAGCGTTTTAAGCG
TGGCTAAGGCGTTTTCTTTGAAGGCTAAAGGGATTTTTTGCGTGAGTAATTATGTAGGGCTTAACGCGCATCAGGAATTT
AAAGAAAACCACGCCAAAGTCAAACAGATTTTAGAAAACATCATTGATAGTTTAATAATTTAA

Upstream 100 bases:

>100_bases
TGAAATGTGAATGAAGCCTTAAAATTAAGGTGTTTCTTTTAAGGGTTTGTCTATAATGCTTGCTTTATAATAAGCTAATG
GATGCGAAAAAAGGATTTTC

Downstream 100 bases:

>100_bases
TAGTTTAGCTATCATGGGGCATTCTAAATTAAAGGCGATCACATGTTTGAAAAAATACGCAAGATTTTAGCGGATATTGA
AGATTCGCAAAATGAAATTG

Product: purine nucleoside phosphorylase

Products: NA

Alternate protein names: Bacterioferritin Comigratory Protein Bcp; Purine Or Other Phosphorylase Family 1 Protein

Number of amino acids: Translated: 180; Mature: 180

Protein sequence:

>180_residues
MLLCAGRNETLKGATPIGVGLIGSAINLTRMCLKNPDTESLIFIGSAGSYSPEMELLSVFESVCGYQIEESFSHLNSYTP
LDNFIQIETKEEALFERVGVNSSNYIHTSEMFAKKMAQKGVLLENMEFFSVLSVAKAFSLKAKGIFCVSNYVGLNAHQEF
KENHAKVKQILENIIDSLII

Sequences:

>Translated_180_residues
MLLCAGRNETLKGATPIGVGLIGSAINLTRMCLKNPDTESLIFIGSAGSYSPEMELLSVFESVCGYQIEESFSHLNSYTP
LDNFIQIETKEEALFERVGVNSSNYIHTSEMFAKKMAQKGVLLENMEFFSVLSVAKAFSLKAKGIFCVSNYVGLNAHQEF
KENHAKVKQILENIIDSLII
>Mature_180_residues
MLLCAGRNETLKGATPIGVGLIGSAINLTRMCLKNPDTESLIFIGSAGSYSPEMELLSVFESVCGYQIEESFSHLNSYTP
LDNFIQIETKEEALFERVGVNSSNYIHTSEMFAKKMAQKGVLLENMEFFSVLSVAKAFSLKAKGIFCVSNYVGLNAHQEF
KENHAKVKQILENIIDSLII

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19897; Mature: 19897

Theoretical pI: Translated: 5.27; Mature: 5.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLCAGRNETLKGATPIGVGLIGSAINLTRMCLKNPDTESLIFIGSAGSYSPEMELLSVF
CEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCHHHHHHHH
ESVCGYQIEESFSHLNSYTPLDNFIQIETKEEALFERVGVNSSNYIHTSEMFAKKMAQKG
HHHHCCHHHHHHHHHHCCCCCCCEEEEECHHHHHHHHHCCCCCCCEEHHHHHHHHHHHCC
VLLENMEFFSVLSVAKAFSLKAKGIFCVSNYVGLNAHQEFKENHAKVKQILENIIDSLII
CHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLLCAGRNETLKGATPIGVGLIGSAINLTRMCLKNPDTESLIFIGSAGSYSPEMELLSVF
CEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCHHHHHHHH
ESVCGYQIEESFSHLNSYTPLDNFIQIETKEEALFERVGVNSSNYIHTSEMFAKKMAQKG
HHHHCCHHHHHHHHHHCCCCCCCEEEEECHHHHHHHHHCCCCCCCEEHHHHHHHHHHHCC
VLLENMEFFSVLSVAKAFSLKAKGIFCVSNYVGLNAHQEFKENHAKVKQILENIIDSLII
CHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA