| Definition | Helicobacter pylori HPAG1 chromosome, complete genome. |
|---|---|
| Accession | NC_008086 |
| Length | 1,596,366 |
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The map label for this gene is 108563811
Identifier: 108563811
GI number: 108563811
Start: 1434995
End: 1435537
Strand: Reverse
Name: 108563811
Synonym: HPAG1_1386
Alternate gene names: NA
Gene position: 1435537-1434995 (Counterclockwise)
Preceding gene: 108563815
Following gene: 108563810
Centisome position: 89.93
GC content: 38.49
Gene sequence:
>543_bases ATGCTGCTTTGCGCTGGAAGGAATGAAACTTTAAAAGGGGCGACGCCTATTGGTGTGGGTTTGATAGGAAGTGCGATTAA TTTAACGAGAATGTGCCTAAAAAACCCTGATACAGAAAGCCTTATTTTTATAGGGAGCGCGGGGAGTTATAGCCCAGAAA TGGAGCTTTTAAGCGTGTTTGAAAGCGTTTGTGGCTATCAAATTGAAGAGAGTTTTAGCCATTTAAACAGCTACACGCCT TTGGATAATTTTATTCAAATAGAAACCAAAGAGGAGGCTCTTTTTGAAAGGGTGGGCGTGAATAGCAGTAACTATATCCA CACCAGCGAAATGTTTGCTAAAAAAATGGCTCAAAAGGGCGTTTTATTAGAAAACATGGAGTTTTTTAGCGTTTTAAGCG TGGCTAAGGCGTTTTCTTTGAAGGCTAAAGGGATTTTTTGCGTGAGTAATTATGTAGGGCTTAACGCGCATCAGGAATTT AAAGAAAACCACGCCAAAGTCAAACAGATTTTAGAAAACATCATTGATAGTTTAATAATTTAA
Upstream 100 bases:
>100_bases TGAAATGTGAATGAAGCCTTAAAATTAAGGTGTTTCTTTTAAGGGTTTGTCTATAATGCTTGCTTTATAATAAGCTAATG GATGCGAAAAAAGGATTTTC
Downstream 100 bases:
>100_bases TAGTTTAGCTATCATGGGGCATTCTAAATTAAAGGCGATCACATGTTTGAAAAAATACGCAAGATTTTAGCGGATATTGA AGATTCGCAAAATGAAATTG
Product: purine nucleoside phosphorylase
Products: NA
Alternate protein names: Bacterioferritin Comigratory Protein Bcp; Purine Or Other Phosphorylase Family 1 Protein
Number of amino acids: Translated: 180; Mature: 180
Protein sequence:
>180_residues MLLCAGRNETLKGATPIGVGLIGSAINLTRMCLKNPDTESLIFIGSAGSYSPEMELLSVFESVCGYQIEESFSHLNSYTP LDNFIQIETKEEALFERVGVNSSNYIHTSEMFAKKMAQKGVLLENMEFFSVLSVAKAFSLKAKGIFCVSNYVGLNAHQEF KENHAKVKQILENIIDSLII
Sequences:
>Translated_180_residues MLLCAGRNETLKGATPIGVGLIGSAINLTRMCLKNPDTESLIFIGSAGSYSPEMELLSVFESVCGYQIEESFSHLNSYTP LDNFIQIETKEEALFERVGVNSSNYIHTSEMFAKKMAQKGVLLENMEFFSVLSVAKAFSLKAKGIFCVSNYVGLNAHQEF KENHAKVKQILENIIDSLII >Mature_180_residues MLLCAGRNETLKGATPIGVGLIGSAINLTRMCLKNPDTESLIFIGSAGSYSPEMELLSVFESVCGYQIEESFSHLNSYTP LDNFIQIETKEEALFERVGVNSSNYIHTSEMFAKKMAQKGVLLENMEFFSVLSVAKAFSLKAKGIFCVSNYVGLNAHQEF KENHAKVKQILENIIDSLII
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19897; Mature: 19897
Theoretical pI: Translated: 5.27; Mature: 5.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLCAGRNETLKGATPIGVGLIGSAINLTRMCLKNPDTESLIFIGSAGSYSPEMELLSVF CEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCHHHHHHHH ESVCGYQIEESFSHLNSYTPLDNFIQIETKEEALFERVGVNSSNYIHTSEMFAKKMAQKG HHHHCCHHHHHHHHHHCCCCCCCEEEEECHHHHHHHHHCCCCCCCEEHHHHHHHHHHHCC VLLENMEFFSVLSVAKAFSLKAKGIFCVSNYVGLNAHQEFKENHAKVKQILENIIDSLII CHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MLLCAGRNETLKGATPIGVGLIGSAINLTRMCLKNPDTESLIFIGSAGSYSPEMELLSVF CEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCHHHHHHHH ESVCGYQIEESFSHLNSYTPLDNFIQIETKEEALFERVGVNSSNYIHTSEMFAKKMAQKG HHHHCCHHHHHHHHHHCCCCCCCEEEEECHHHHHHHHHCCCCCCCEEHHHHHHHHHHHCC VLLENMEFFSVLSVAKAFSLKAKGIFCVSNYVGLNAHQEFKENHAKVKQILENIIDSLII CHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA