Definition Helicobacter pylori HPAG1 chromosome, complete genome.
Accession NC_008086
Length 1,596,366

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The map label for this gene is tolQ [C]

Identifier: 108563796

GI number: 108563796

Start: 1422827

End: 1423279

Strand: Direct

Name: tolQ [C]

Synonym: HPAG1_1371

Alternate gene names: 108563796

Gene position: 1422827-1423279 (Clockwise)

Preceding gene: 108563795

Following gene: 108563797

Centisome position: 89.13

GC content: 41.28

Gene sequence:

>453_bases
ATGAAAGAAATGGTAGATTATGGGATTATAGGGTTTTTGATCTTTCTATCAGTCATCGTTATAGCGATCGCAATAGAAAG
GTTGTGGTTTTTTGCCACTCTTCGTGTAGATGACTACACAGACAGGCGTAAATTAGAACTGGCCTTACACAAACGACTGA
CTTTAGTGGCCACGATTGGCTCTAACGCCCCTTATATCGGTCTTTTAGGAACGGTTATGGGGATCATGCTCACTTTTATG
GATTTAGGATCCGCTTCTGGCATTGACACTAAAGCGATCATGACTAATTTAGCCCTTGCTTTAAAAGCGACTGGCATGGG
GTTATTGGTAGCGATCCCTGCGATTGTGATTTATAACTTGCTAGTGAGAAAAAGCGAAATTTTAGTCACTAAATGGGATA
TTTTCCACCACCCGGTTGACACGCAATCCCATGAGATTTATAACAAAGCCTAA

Upstream 100 bases:

>100_bases
TGAAAGGAAAAAGATTGCACGACAAAAGACAAAGCCTTAAAGAAAAAGCACTCAATAAAGAAATTCTTGCTGATTTAAAA
CACCACTTTAAAGGATAATA

Downstream 100 bases:

>100_bases
GGATTAAGCGGTGAAAAAAGTAGAATCCATGAATGTGGTGCCTTTCATTGACATCATGCTTGTGTTGTTAGTGATCGTGC
TTACAACAGCGTCTTTTGTG

Product: biopolymer transport protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 150; Mature: 150

Protein sequence:

>150_residues
MKEMVDYGIIGFLIFLSVIVIAIAIERLWFFATLRVDDYTDRRKLELALHKRLTLVATIGSNAPYIGLLGTVMGIMLTFM
DLGSASGIDTKAIMTNLALALKATGMGLLVAIPAIVIYNLLVRKSEILVTKWDIFHHPVDTQSHEIYNKA

Sequences:

>Translated_150_residues
MKEMVDYGIIGFLIFLSVIVIAIAIERLWFFATLRVDDYTDRRKLELALHKRLTLVATIGSNAPYIGLLGTVMGIMLTFM
DLGSASGIDTKAIMTNLALALKATGMGLLVAIPAIVIYNLLVRKSEILVTKWDIFHHPVDTQSHEIYNKA
>Mature_150_residues
MKEMVDYGIIGFLIFLSVIVIAIAIERLWFFATLRVDDYTDRRKLELALHKRLTLVATIGSNAPYIGLLGTVMGIMLTFM
DLGSASGIDTKAIMTNLALALKATGMGLLVAIPAIVIYNLLVRKSEILVTKWDIFHHPVDTQSHEIYNKA

Specific function: Involved In The Tonb-Independent Uptake Of Group A Colicins (Colicins A, E1, E2, E3, And K). [C]

COG id: COG0811

COG function: function code U; Biopolymer transport proteins

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the exbB/tolQ family [H]

Homologues:

Organism=Escherichia coli, GI1786958, Length=93, Percent_Identity=40.8602150537634, Blast_Score=67, Evalue=6e-13,
Organism=Escherichia coli, GI1789381, Length=69, Percent_Identity=43.4782608695652, Blast_Score=62, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002898
- InterPro:   IPR014172 [H]

Pfam domain/function: PF01618 MotA_ExbB [H]

EC number: NA

Molecular weight: Translated: 16665; Mature: 16665

Theoretical pI: Translated: 8.86; Mature: 8.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKEMVDYGIIGFLIFLSVIVIAIAIERLWFFATLRVDDYTDRRKLELALHKRLTLVATIG
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHHHHHEEEEEEEC
SNAPYIGLLGTVMGIMLTFMDLGSASGIDTKAIMTNLALALKATGMGLLVAIPAIVIYNL
CCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
LVRKSEILVTKWDIFHHPVDTQSHEIYNKA
HHCCCCEEEEEHHHHCCCCCCCCCHHCCCC
>Mature Secondary Structure
MKEMVDYGIIGFLIFLSVIVIAIAIERLWFFATLRVDDYTDRRKLELALHKRLTLVATIG
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHHHHHEEEEEEEC
SNAPYIGLLGTVMGIMLTFMDLGSASGIDTKAIMTNLALALKATGMGLLVAIPAIVIYNL
CCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
LVRKSEILVTKWDIFHHPVDTQSHEIYNKA
HHCCCCEEEEEHHHHCCCCCCCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9923682 [H]