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The map label for this gene is 108563752

Identifier: 108563752

GI number: 108563752

Start: 1374956

End: 1375819

Strand: Reverse

Name: 108563752

Synonym: HPAG1_1327

Alternate gene names: NA

Gene position: 1375819-1374956 (Counterclockwise)

Preceding gene: 108563753

Following gene: 161984736

Centisome position: 86.18

GC content: 37.62

Gene sequence:

>864_bases
ATGAAAACCTTTAAAAACTGGCTCTGTTTTATCCTGATCGCTATGGGTTGGCTCCAAGCGGACATGCTGGATAATTTCAC
TAAGGCCATTAACAGCTACACCACTAAAAAGCTTAATGAAATCAAGGATCAAGTCAATAGCGCTAATCCTACTAAAAATC
GCAATACCGCTTATAGCGCTAATGGCATGCTCACTAACATTGATTGTAAAGTCTTAAAAAATAACTTCTATTCGGTGTGT
TATTCTAGCGAGTTAAAAAACCCTATTTATGGCGTGAGCGTGTTGTTTGGGGATTTAGTGGATAAAAATAACATTGAAAA
ACGCTATGAGTTTAAGACGGACACACGATTGGCCAAATACCAACAAGCCACGACACAAGATTACACCAGAAGCGGTTTTG
ATAGGGGGCATTTTGTGGCGAATGACGCTTCTTTTGATTTCGCGTCTAACCCTTTAAGAGAGACTTACAGAATGACTAAT
ATCACCCCTGAAGTCAAAAACACCAACAGGCATTCTGTTTTATTAGTGGAAAAAGAGGGCCGTAATTTGGCTAAGAAATA
CCATCAAGTTTTAGTAGAAGAACTCACCATCATCAAACAAGGTTATAGGACTTTTAGCTCTAAAAACATCGCTATCCCTA
GCGGATTTTGGTACCACTATGATATAAGCCTAACAGATAGCTATGAAAACGCTAAAAGCGAATGCTTTTATATCCCTAAT
GACAACCAAAACTATCCCTTACAAGAAATGAGAAGAGATTGTAAAGAATATGAGCGGGTTGAAAAGCAAGTGGTTTTTAA
GAACAATAAAAACACTGAGTTGAATGAATTGCCTAAGTATCTTAACAACGCTAAGAAGTATTGA

Upstream 100 bases:

>100_bases
CAATGCGCGCCATTTAACGCATCAAAACCTATTTAGCGAGTAAAAACAAACGATTAAAAATATTGTTGTAGTATTCAAGC
CAACCAACAAGGAGCAAAAC

Downstream 100 bases:

>100_bases
AACCGCCCTTAAAATGCCCCTAAAAACACCGGTATTTTTGATAAAAAGGTTTAAGGAATCAAATCCCTAAACGGCTAAAA
TTGGTTTTTTGTTGGAAGCG

Product: putative endonuclease G

Products: NA

Alternate protein names: Endonuclease G; DNA/RNA Endonuclease G; Minor Nuclease C1B Isoform

Number of amino acids: Translated: 287; Mature: 287

Protein sequence:

>287_residues
MKTFKNWLCFILIAMGWLQADMLDNFTKAINSYTTKKLNEIKDQVNSANPTKNRNTAYSANGMLTNIDCKVLKNNFYSVC
YSSELKNPIYGVSVLFGDLVDKNNIEKRYEFKTDTRLAKYQQATTQDYTRSGFDRGHFVANDASFDFASNPLRETYRMTN
ITPEVKNTNRHSVLLVEKEGRNLAKKYHQVLVEELTIIKQGYRTFSSKNIAIPSGFWYHYDISLTDSYENAKSECFYIPN
DNQNYPLQEMRRDCKEYERVEKQVVFKNNKNTELNELPKYLNNAKKY

Sequences:

>Translated_287_residues
MKTFKNWLCFILIAMGWLQADMLDNFTKAINSYTTKKLNEIKDQVNSANPTKNRNTAYSANGMLTNIDCKVLKNNFYSVC
YSSELKNPIYGVSVLFGDLVDKNNIEKRYEFKTDTRLAKYQQATTQDYTRSGFDRGHFVANDASFDFASNPLRETYRMTN
ITPEVKNTNRHSVLLVEKEGRNLAKKYHQVLVEELTIIKQGYRTFSSKNIAIPSGFWYHYDISLTDSYENAKSECFYIPN
DNQNYPLQEMRRDCKEYERVEKQVVFKNNKNTELNELPKYLNNAKKY
>Mature_287_residues
MKTFKNWLCFILIAMGWLQADMLDNFTKAINSYTTKKLNEIKDQVNSANPTKNRNTAYSANGMLTNIDCKVLKNNFYSVC
YSSELKNPIYGVSVLFGDLVDKNNIEKRYEFKTDTRLAKYQQATTQDYTRSGFDRGHFVANDASFDFASNPLRETYRMTN
ITPEVKNTNRHSVLLVEKEGRNLAKKYHQVLVEELTIIKQGYRTFSSKNIAIPSGFWYHYDISLTDSYENAKSECFYIPN
DNQNYPLQEMRRDCKEYERVEKQVVFKNNKNTELNELPKYLNNAKKY

Specific function: Unknown

COG id: COG1864

COG function: function code F; DNA/RNA endonuclease G, NUC1

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33611; Mature: 33611

Theoretical pI: Translated: 9.23; Mature: 9.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTFKNWLCFILIAMGWLQADMLDNFTKAINSYTTKKLNEIKDQVNSANPTKNRNTAYSA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEC
NGMLTNIDCKVLKNNFYSVCYSSELKNPIYGVSVLFGDLVDKNNIEKRYEFKTDTRLAKY
CCEEEECHHHHHHCCHHHHEEHHHHCCCHHHHHHHHHHHHCCCCCHHHHHCCHHHHHHHH
QQATTQDYTRSGFDRGHFVANDASFDFASNPLRETYRMTNITPEVKNTNRHSVLLVEKEG
HHHHHHHHHHCCCCCCCEEECCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCEEEEEECCC
RNLAKKYHQVLVEELTIIKQGYRTFSSKNIAIPSGFWYHYDISLTDSYENAKSECFYIPN
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCEEEEEEEEECCCCCCCCCEEECCC
DNQNYPLQEMRRDCKEYERVEKQVVFKNNKNTELNELPKYLNNAKKY
CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCC
>Mature Secondary Structure
MKTFKNWLCFILIAMGWLQADMLDNFTKAINSYTTKKLNEIKDQVNSANPTKNRNTAYSA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEC
NGMLTNIDCKVLKNNFYSVCYSSELKNPIYGVSVLFGDLVDKNNIEKRYEFKTDTRLAKY
CCEEEECHHHHHHCCHHHHEEHHHHCCCHHHHHHHHHHHHCCCCCHHHHHCCHHHHHHHH
QQATTQDYTRSGFDRGHFVANDASFDFASNPLRETYRMTNITPEVKNTNRHSVLLVEKEG
HHHHHHHHHHCCCCCCCEEECCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCEEEEEECCC
RNLAKKYHQVLVEELTIIKQGYRTFSSKNIAIPSGFWYHYDISLTDSYENAKSECFYIPN
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCEEEEEEEEECCCCCCCCCEEECCC
DNQNYPLQEMRRDCKEYERVEKQVVFKNNKNTELNELPKYLNNAKKY
CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA