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The map label for this gene is 108563738

Identifier: 108563738

GI number: 108563738

Start: 1359803

End: 1361227

Strand: Direct

Name: 108563738

Synonym: HPAG1_1313

Alternate gene names: NA

Gene position: 1359803-1361227 (Clockwise)

Preceding gene: 108563714

Following gene: 108563739

Centisome position: 85.18

GC content: 33.54

Gene sequence:

>1425_bases
ATGAAAACGAACGAAGCGCAATTTTATGAAGTTTTAGAAAACCTTTTCATAGGCGTTAAGATTGAAGATAAGCAAGAAAG
CCTTTTAGATTCTAACCCTAGAGCGGTAAAAAATGGCATGCTCAATCTATTGAAGGCTAAGAGCAAGTATTATCAAAGCA
AAAAACAAGAATTAGAAAAACTCATTGATTGTAAATGCCAAAACAACAACAATCTCAAAGAAGAATTGTTTGACAAACTC
TATAGCTTTTTCAAGCGTTATTTGAGCGCTAATGGAGGGATTTATTTCAACGACACGCCCCTTTATGACAGCCTTTATAC
TAAAAGCGATTATGAAAAATGCTCCCTTAAAAAAGATACCGCCTTATTTTATAAAACTAAAGATCTTTATTATGTGAAAA
GCGAAACGAACTATAAGGATTTTTGCTTTGAATTAGAAAACATTCTTTTTAATTTTGACGCTTCTTTACTAGAAAGCAAA
AAGTATAATGAAAAAGTGGATTTAATCTTTGATTTAAAAAGTATAGTAAAAGATACAGACACAAAAACCAACACCCTAAA
TTTTAGCGTTACTCTCAGCAGTCAAGGGAATCAAACAAAAATAAGTGAAATCCTAAAAGATTGTTTCAATCAAGGCGTCA
AACTTGATGAAGAAATTTTAAAAAAAGCGTTTGGAAAATTCAAAAAGCAAGGCAGTATGGATTATTTCATCCATAAAAAC
GCGCTAGGGTTTTTAAAAGAGCAATTGGATTTGTATTTGTTTGAATACCTTTTTAAAGAAATGACTGCATTTGATGCTAA
ACGCCTTAATGAGATCAACATTATTAAAGAAGTGGCTTTAGAAGTGGTTTCATTAGTGAGCGAATTTGAAAACGAACTTT
GTAAGATTTGGAACAAACCTCGTTTTGTATTAAACTCGCATTTCATTGTAAGCTTGGATCAATTAAAAGCTAAAAACTAC
GATTTGAATAAAATAAAAAACCACAAAAACTACCCCAAACAAGTCCAAGAATGGCAAGACTTGAATTTAAAAACCACAGA
CAATCTTTTAGAAAATGAGTTCTTGCCCCTAGACACGATTTATTTTAAAGATTTAGAAGAAGAGGTTAAAAGCCAATTCA
ATGAAGATGAAATCAATGGCACGCTCATTAAAAGCGAAAACTACCAAGCCCTAAACTCTCTCAAAAACCGCTATAAAGAA
ACCATTGATTGCATTTACATTGATCCGCCTTACAACACGCAAAACAATGAATTTATTTATGCGGATAATTTCAAACGCTC
CAGCTGGCTCGCTATGATGGAAAACCGTTTGGAGCTTGCACACGCTCTATTGAATGATAAAGGCGTGATGTTTGTGAGCA
TCGATGACAACGAACAGGCTTATTGCAAAGTGCTCATGGACGAAGTGTTTAATGGGGGGGGGTGA

Upstream 100 bases:

>100_bases
GTCTTCTAGTAAAAAAATCTTTTTTTGCATGGGGGTATTGTAGCGCTTAATGAGCGGGCTTTGTTATAATACTTTTTCAT
GTTTTTTAAGGAGCGTGATG

Downstream 100 bases:

>100_bases
TAACTTTGTAAATACGATTATTTGGGAAAAAAAGTATTCTCCACAAAATGATGCGAAATGGTTCTCTGATAACCACGATT
TTATTTTACTATATGCTAAG

Product: type III restriction enzyme M protein

Products: NA

Alternate protein names: M.HindVIP; HindVIP methyltransferase [H]

Number of amino acids: Translated: 474; Mature: 474

Protein sequence:

>474_residues
MKTNEAQFYEVLENLFIGVKIEDKQESLLDSNPRAVKNGMLNLLKAKSKYYQSKKQELEKLIDCKCQNNNNLKEELFDKL
YSFFKRYLSANGGIYFNDTPLYDSLYTKSDYEKCSLKKDTALFYKTKDLYYVKSETNYKDFCFELENILFNFDASLLESK
KYNEKVDLIFDLKSIVKDTDTKTNTLNFSVTLSSQGNQTKISEILKDCFNQGVKLDEEILKKAFGKFKKQGSMDYFIHKN
ALGFLKEQLDLYLFEYLFKEMTAFDAKRLNEINIIKEVALEVVSLVSEFENELCKIWNKPRFVLNSHFIVSLDQLKAKNY
DLNKIKNHKNYPKQVQEWQDLNLKTTDNLLENEFLPLDTIYFKDLEEEVKSQFNEDEINGTLIKSENYQALNSLKNRYKE
TIDCIYIDPPYNTQNNEFIYADNFKRSSWLAMMENRLELAHALLNDKGVMFVSIDDNEQAYCKVLMDEVFNGGG

Sequences:

>Translated_474_residues
MKTNEAQFYEVLENLFIGVKIEDKQESLLDSNPRAVKNGMLNLLKAKSKYYQSKKQELEKLIDCKCQNNNNLKEELFDKL
YSFFKRYLSANGGIYFNDTPLYDSLYTKSDYEKCSLKKDTALFYKTKDLYYVKSETNYKDFCFELENILFNFDASLLESK
KYNEKVDLIFDLKSIVKDTDTKTNTLNFSVTLSSQGNQTKISEILKDCFNQGVKLDEEILKKAFGKFKKQGSMDYFIHKN
ALGFLKEQLDLYLFEYLFKEMTAFDAKRLNEINIIKEVALEVVSLVSEFENELCKIWNKPRFVLNSHFIVSLDQLKAKNY
DLNKIKNHKNYPKQVQEWQDLNLKTTDNLLENEFLPLDTIYFKDLEEEVKSQFNEDEINGTLIKSENYQALNSLKNRYKE
TIDCIYIDPPYNTQNNEFIYADNFKRSSWLAMMENRLELAHALLNDKGVMFVSIDDNEQAYCKVLMDEVFNGGG
>Mature_474_residues
MKTNEAQFYEVLENLFIGVKIEDKQESLLDSNPRAVKNGMLNLLKAKSKYYQSKKQELEKLIDCKCQNNNNLKEELFDKL
YSFFKRYLSANGGIYFNDTPLYDSLYTKSDYEKCSLKKDTALFYKTKDLYYVKSETNYKDFCFELENILFNFDASLLESK
KYNEKVDLIFDLKSIVKDTDTKTNTLNFSVTLSSQGNQTKISEILKDCFNQGVKLDEEILKKAFGKFKKQGSMDYFIHKN
ALGFLKEQLDLYLFEYLFKEMTAFDAKRLNEINIIKEVALEVVSLVSEFENELCKIWNKPRFVLNSHFIVSLDQLKAKNY
DLNKIKNHKNYPKQVQEWQDLNLKTTDNLLENEFLPLDTIYFKDLEEEVKSQFNEDEINGTLIKSENYQALNSLKNRYKE
TIDCIYIDPPYNTQNNEFIYADNFKRSSWLAMMENRLELAHALLNDKGVMFVSIDDNEQAYCKVLMDEVFNGGG

Specific function: Unknown

COG id: COG2189

COG function: function code L; Adenine specific DNA methylase Mod

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the N(4)/N(6)-methyltransferase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002941
- InterPro:   IPR002052
- InterPro:   IPR001091 [H]

Pfam domain/function: PF01555 N6_N4_Mtase [H]

EC number: =2.1.1.72 [H]

Molecular weight: Translated: 55715; Mature: 55715

Theoretical pI: Translated: 5.01; Mature: 5.01

Prosite motif: PS00092 N6_MTASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTNEAQFYEVLENLFIGVKIEDKQESLLDSNPRAVKNGMLNLLKAKSKYYQSKKQELEK
CCCCHHHHHHHHHHHEEEEEECCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
LIDCKCQNNNNLKEELFDKLYSFFKRYLSANGGIYFNDTPLYDSLYTKSDYEKCSLKKDT
HHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCHHHHCCCCHHHHCCCCCC
ALFYKTKDLYYVKSETNYKDFCFELENILFNFDASLLESKKYNEKVDLIFDLKSIVKDTD
EEEEEECCEEEEECCCCHHHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHHCCC
TKTNTLNFSVTLSSQGNQTKISEILKDCFNQGVKLDEEILKKAFGKFKKQGSMDYFIHKN
CCCEEEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCEEEEEHH
ALGFLKEQLDLYLFEYLFKEMTAFDAKRLNEINIIKEVALEVVSLVSEFENELCKIWNKP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
RFVLNSHFIVSLDQLKAKNYDLNKIKNHKNYPKQVQEWQDLNLKTTDNLLENEFLPLDTI
CEEECCCEEEEHHHHHCCCCCHHHHHCCCCCCHHHHHHHCCCCCCHHHHHHCCCCCCHHH
YFKDLEEEVKSQFNEDEINGTLIKSENYQALNSLKNRYKETIDCIYIDPPYNTQNNEFIY
HHHHHHHHHHHCCCCCCCCCEEEECCCHHHHHHHHHHHHHCEEEEEECCCCCCCCCEEEE
ADNFKRSSWLAMMENRLELAHALLNDKGVMFVSIDDNEQAYCKVLMDEVFNGGG
ECCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKTNEAQFYEVLENLFIGVKIEDKQESLLDSNPRAVKNGMLNLLKAKSKYYQSKKQELEK
CCCCHHHHHHHHHHHEEEEEECCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
LIDCKCQNNNNLKEELFDKLYSFFKRYLSANGGIYFNDTPLYDSLYTKSDYEKCSLKKDT
HHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCHHHHCCCCHHHHCCCCCC
ALFYKTKDLYYVKSETNYKDFCFELENILFNFDASLLESKKYNEKVDLIFDLKSIVKDTD
EEEEEECCEEEEECCCCHHHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHHCCC
TKTNTLNFSVTLSSQGNQTKISEILKDCFNQGVKLDEEILKKAFGKFKKQGSMDYFIHKN
CCCEEEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCEEEEEHH
ALGFLKEQLDLYLFEYLFKEMTAFDAKRLNEINIIKEVALEVVSLVSEFENELCKIWNKP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
RFVLNSHFIVSLDQLKAKNYDLNKIKNHKNYPKQVQEWQDLNLKTTDNLLENEFLPLDTI
CEEECCCEEEEHHHHHCCCCCHHHHHCCCCCCHHHHHHHCCCCCCHHHHHHCCCCCCHHH
YFKDLEEEVKSQFNEDEINGTLIKSENYQALNSLKNRYKETIDCIYIDPPYNTQNNEFIY
HHHHHHHHHHHCCCCCCCCCEEEECCCHHHHHHHHHHHHHCEEEEEECCCCCCCCCEEEE
ADNFKRSSWLAMMENRLELAHALLNDKGVMFVSIDDNEQAYCKVLMDEVFNGGG
ECCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]