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The map label for this gene is yjeF [C]

Identifier: 108563735

GI number: 108563735

Start: 1356526

End: 1357920

Strand: Reverse

Name: yjeF [C]

Synonym: HPAG1_1310

Alternate gene names: 108563735

Gene position: 1357920-1356526 (Counterclockwise)

Preceding gene: 108563736

Following gene: 108563734

Centisome position: 85.06

GC content: 42.44

Gene sequence:

>1395_bases
ATGCTTTCAGTGTATGAAAAAGTGAATGCTCTAGATAAAAGGGCGATTGAAGAATTGTTTTTAAGCGAAGACGTTTTAAT
GGAAAACGCCGCTATGGCTTTAGAAAGGGCGGTTTTACAAAACGCTTCTTTGGGTGCTAAGGTCATTATCCTTTGTGGGA
GCGGGGATAATGGGGGCGATGGCTATGCTCTAGCCAGGCGTTTAGTGGGGCGTTTTAAAACGCTGATCTTTGAAATGAAA
CGAGCCAAAAGCCCCATGTGCCAATTGCAAAAAGAAAGGGCTAAAAAAGTGGGGGTAGTCATCAAAACATGGGAAGAAAA
GAATGAAGATTTAGAATGCGATGTGTTAATAGATTGCGTGGTAGGGAGCGCTTTTAAGGGCGAATTAGAGCCGTTTTTAG
ACTTTGAAAGCCTTTCTCAAAAAGCGCGCTTTAAAATCGCTTGCGACATTCCTAGCGGGATCGATTCTAAAGGCAGGGTG
GATAAGAGGGCGTTTAAAGCGGATACGACTATCAGCATGGGCGCTATCAAATCATGCTTATTGAGCGATAGGGCTAAAGA
CTATGTGGGGGAATTGAAAGTGGGGCATTTAGGGGTTTTTAATCCAATTTATGAGATCCCAACAGACACTTTTTTACTGG
AAAAAAGCGATTTGAAACTGCCCTTAAGGGATAAAAAAAACGCTCATAAAGGCGATTACGGGCATGCGCACATTCTTTTA
GGCAAGCATAGTGGGGCGGGGTTATTGAGCGCAATAAGTGCGTTAAGTTTTGGATCTGGGGTGGTGAGCGTTCAAGCGTT
AGAATGCGAGATAACTTCTAATAACAAGCCTTTAGAATTGGTTTTTTGTGAAAATTTCCCTAAAAAGCTCAGCGCGTTCG
CTCTTGGCATGGGGTTAGAGGGTTTGCCAAAGGATTTTAACAAGTGGCTTGGATTAGCCCCATGCGTTTTAGATGCGGGC
GTTTTTTATCATAAAGAGGTGTTACAAGCCTTAGAAAAAGAAGTGATCTTAACCCCTCACCCTAAAGAGTTTTTATCGTT
GTTAAAATTAGTGGGGATCAATATAAGCATGCTAGAATTACTAGACAATAAGCTAGAAATCGCAAGGGATTTTTCCCAAA
AATACCCCAAGGTGGTTTTGCTTTTAAAAGGGGCTAATACCCTAATCGCTCATCAAGGGCGAACTTTTATCAATACTTTA
GGGAGCGTGGCTTTGGCTAAAGCTGGGAGTGGCGATGTGTTAGCGGGGCTGATTGTAAGCTTGCTTTCTCAAAACTACAC
GCCTTTAGACGCCGCTATTAACGCAAGTTTAGCGCACGCCCTAGCGAGTTTAGAATTGAAGAACAATTACGCTTTAACGC
CCCTAGATTTGATAGAAAAGATCAAACGATTATAA

Upstream 100 bases:

>100_bases
TGTGCGAAAAGTATAAAATGCGTTTAGAAATCCATAGCGAACCCTCTTTAAAAGGATCGTTTTACGAAAATTCGTTTTGC
GTTCAATTTCAAGGATAAAG

Downstream 100 bases:

>100_bases
AAGGATAAAAATGGATCATTTAAAGCATTTGCAGCAATTGCAAAACATTGAAAGGATCGTGCTTTCAGGCATTGTGTTGG
CCAATCATAAGATTGAAGAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 464; Mature: 464

Protein sequence:

>464_residues
MLSVYEKVNALDKRAIEELFLSEDVLMENAAMALERAVLQNASLGAKVIILCGSGDNGGDGYALARRLVGRFKTLIFEMK
RAKSPMCQLQKERAKKVGVVIKTWEEKNEDLECDVLIDCVVGSAFKGELEPFLDFESLSQKARFKIACDIPSGIDSKGRV
DKRAFKADTTISMGAIKSCLLSDRAKDYVGELKVGHLGVFNPIYEIPTDTFLLEKSDLKLPLRDKKNAHKGDYGHAHILL
GKHSGAGLLSAISALSFGSGVVSVQALECEITSNNKPLELVFCENFPKKLSAFALGMGLEGLPKDFNKWLGLAPCVLDAG
VFYHKEVLQALEKEVILTPHPKEFLSLLKLVGINISMLELLDNKLEIARDFSQKYPKVVLLLKGANTLIAHQGRTFINTL
GSVALAKAGSGDVLAGLIVSLLSQNYTPLDAAINASLAHALASLELKNNYALTPLDLIEKIKRL

Sequences:

>Translated_464_residues
MLSVYEKVNALDKRAIEELFLSEDVLMENAAMALERAVLQNASLGAKVIILCGSGDNGGDGYALARRLVGRFKTLIFEMK
RAKSPMCQLQKERAKKVGVVIKTWEEKNEDLECDVLIDCVVGSAFKGELEPFLDFESLSQKARFKIACDIPSGIDSKGRV
DKRAFKADTTISMGAIKSCLLSDRAKDYVGELKVGHLGVFNPIYEIPTDTFLLEKSDLKLPLRDKKNAHKGDYGHAHILL
GKHSGAGLLSAISALSFGSGVVSVQALECEITSNNKPLELVFCENFPKKLSAFALGMGLEGLPKDFNKWLGLAPCVLDAG
VFYHKEVLQALEKEVILTPHPKEFLSLLKLVGINISMLELLDNKLEIARDFSQKYPKVVLLLKGANTLIAHQGRTFINTL
GSVALAKAGSGDVLAGLIVSLLSQNYTPLDAAINASLAHALASLELKNNYALTPLDLIEKIKRL
>Mature_464_residues
MLSVYEKVNALDKRAIEELFLSEDVLMENAAMALERAVLQNASLGAKVIILCGSGDNGGDGYALARRLVGRFKTLIFEMK
RAKSPMCQLQKERAKKVGVVIKTWEEKNEDLECDVLIDCVVGSAFKGELEPFLDFESLSQKARFKIACDIPSGIDSKGRV
DKRAFKADTTISMGAIKSCLLSDRAKDYVGELKVGHLGVFNPIYEIPTDTFLLEKSDLKLPLRDKKNAHKGDYGHAHILL
GKHSGAGLLSAISALSFGSGVVSVQALECEITSNNKPLELVFCENFPKKLSAFALGMGLEGLPKDFNKWLGLAPCVLDAG
VFYHKEVLQALEKEVILTPHPKEFLSLLKLVGINISMLELLDNKLEIARDFSQKYPKVVLLLKGANTLIAHQGRTFINTL
GSVALAKAGSGDVLAGLIVSLLSQNYTPLDAAINASLAHALASLELKNNYALTPLDLIEKIKRL

Specific function: Unknown

COG id: COG0063

COG function: function code G; Predicted sugar kinase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 YjeF N-terminal domain [H]

Homologues:

Organism=Escherichia coli, GI1790609, Length=447, Percent_Identity=29.082774049217, Blast_Score=122, Evalue=7e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017953
- InterPro:   IPR000631
- InterPro:   IPR004443 [H]

Pfam domain/function: PF01256 Carb_kinase; PF03853 YjeF_N [H]

EC number: NA

Molecular weight: Translated: 50582; Mature: 50582

Theoretical pI: Translated: 7.96; Mature: 7.96

Prosite motif: PS01050 UPF0031_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSVYEKVNALDKRAIEELFLSEDVLMENAAMALERAVLQNASLGAKVIILCGSGDNGGD
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCC
GYALARRLVGRFKTLIFEMKRAKSPMCQLQKERAKKVGVVIKTWEEKNEDLECDVLIDCV
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCEEEEECCCCCCCCCHHEEEEEH
VGSAFKGELEPFLDFESLSQKARFKIACDIPSGIDSKGRVDKRAFKADTTISMGAIKSCL
HCCCCCCCCCCCCCHHHHCCCCCEEEEEECCCCCCCCCCCHHHHHHCCCCCHHHHHHHHH
LSDRAKDYVGELKVGHLGVFNPIYEIPTDTFLLEKSDLKLPLRDKKNAHKGDYGHAHILL
HHHHHHHHHHCCCCCCEECCCCHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCEEEEE
GKHSGAGLLSAISALSFGSGVVSVQALECEITSNNKPLELVFCENFPKKLSAFALGMGLE
ECCCCCHHHHHHHHHHCCCCEEEEEEEEEEEECCCCCEEEEECCCCCHHHHHHHHCCCCC
GLPKDFNKWLGLAPCVLDAGVFYHKEVLQALEKEVILTPHPKEFLSLLKLVGINISMLEL
CCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCEECCCCHHHHHHHHHHHCCCHHHHHH
LDNKLEIARDFSQKYPKVVLLLKGANTLIAHQGRTFINTLGSVALAKAGSGDVLAGLIVS
HHHHHHHHHHHHHCCCEEEEEEECCCEEEECCCCHHHHHHHHHHHHCCCCCCHHHHHHHH
LLSQNYTPLDAAINASLAHALASLELKNNYALTPLDLIEKIKRL
HHHCCCCCHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHCC
>Mature Secondary Structure
MLSVYEKVNALDKRAIEELFLSEDVLMENAAMALERAVLQNASLGAKVIILCGSGDNGGD
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCC
GYALARRLVGRFKTLIFEMKRAKSPMCQLQKERAKKVGVVIKTWEEKNEDLECDVLIDCV
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCEEEEECCCCCCCCCHHEEEEEH
VGSAFKGELEPFLDFESLSQKARFKIACDIPSGIDSKGRVDKRAFKADTTISMGAIKSCL
HCCCCCCCCCCCCCHHHHCCCCCEEEEEECCCCCCCCCCCHHHHHHCCCCCHHHHHHHHH
LSDRAKDYVGELKVGHLGVFNPIYEIPTDTFLLEKSDLKLPLRDKKNAHKGDYGHAHILL
HHHHHHHHHHCCCCCCEECCCCHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCEEEEE
GKHSGAGLLSAISALSFGSGVVSVQALECEITSNNKPLELVFCENFPKKLSAFALGMGLE
ECCCCCHHHHHHHHHHCCCCEEEEEEEEEEEECCCCCEEEEECCCCCHHHHHHHHCCCCC
GLPKDFNKWLGLAPCVLDAGVFYHKEVLQALEKEVILTPHPKEFLSLLKLVGINISMLEL
CCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCEECCCCHHHHHHHHHHHCCCHHHHHH
LDNKLEIARDFSQKYPKVVLLLKGANTLIAHQGRTFINTLGSVALAKAGSGDVLAGLIVS
HHHHHHHHHHHHHCCCEEEEEEECCCEEEECCCCHHHHHHHHHHHHCCCCCCHHHHHHHH
LLSQNYTPLDAAINASLAHALASLELKNNYALTPLDLIEKIKRL
HHHCCCCCHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9252185 [H]