| Definition | Helicobacter pylori HPAG1 chromosome, complete genome. |
|---|---|
| Accession | NC_008086 |
| Length | 1,596,366 |
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The map label for this gene is 108563706
Identifier: 108563706
GI number: 108563706
Start: 1327807
End: 1327998
Strand: Direct
Name: 108563706
Synonym: HPAG1_1281
Alternate gene names: NA
Gene position: 1327807-1327998 (Clockwise)
Preceding gene: 108563705
Following gene: 108563708
Centisome position: 83.18
GC content: 33.33
Gene sequence:
>192_bases TTGAAAAAATTAGTGCAAAAAATCGTTTTAATTTCTGGCGATAGCGATTTTGTCCCTGCTTCAAAACTTGCTCGAGTTGA AGGCATCATTTTCACTCTTGATCCTATGGGAAATCATATTAGAGAGGATCTAGAAGAGCATATTGATTATTTGACCACTA GATTGCCACAATTTAAAAAACAACAACAATAA
Upstream 100 bases:
>100_bases ATAATTAAGTATAGAGGAATTTCAAAATGATGATTTTATCTATCACGCAAAGCAAAAGGGCGTTGATATAAAGATAGGGC TTGATATAGCCACTTTAGCG
Downstream 100 bases:
>100_bases CGCCTATTCAATAAAGCATTAAGAGACTGCCAAAAGGCGTATCTCTTAGTTTTTTAATTTTTAAACAATCACGCCCCCGC CAAGCAAGATGTCATCTTTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 63; Mature: 63
Protein sequence:
>63_residues MKKLVQKIVLISGDSDFVPASKLARVEGIIFTLDPMGNHIREDLEEHIDYLTTRLPQFKKQQQ
Sequences:
>Translated_63_residues MKKLVQKIVLISGDSDFVPASKLARVEGIIFTLDPMGNHIREDLEEHIDYLTTRLPQFKKQQQ >Mature_63_residues MKKLVQKIVLISGDSDFVPASKLARVEGIIFTLDPMGNHIREDLEEHIDYLTTRLPQFKKQQQ
Specific function: Unknown
COG id: COG1432
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7281; Mature: 7281
Theoretical pI: Translated: 7.70; Mature: 7.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKLVQKIVLISGDSDFVPASKLARVEGIIFTLDPMGNHIREDLEEHIDYLTTRLPQFKK CHHHHHHHHHHCCCCCCCCHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHHHHHCHHHHC QQQ CCC >Mature Secondary Structure MKKLVQKIVLISGDSDFVPASKLARVEGIIFTLDPMGNHIREDLEEHIDYLTTRLPQFKK CHHHHHHHHHHCCCCCCCCHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHHHHHCHHHHC QQQ CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA