Definition Helicobacter pylori HPAG1 chromosome, complete genome.
Accession NC_008086
Length 1,596,366

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The map label for this gene is 108563705

Identifier: 108563705

GI number: 108563705

Start: 1327620

End: 1327736

Strand: Direct

Name: 108563705

Synonym: HPAG1_1280

Alternate gene names: NA

Gene position: 1327620-1327736 (Clockwise)

Preceding gene: 108563704

Following gene: 108563706

Centisome position: 83.17

GC content: 32.48

Gene sequence:

>117_bases
TTGGCGTTAAGGTTGGGGTATCTTGATGAGAAAAATGCTAGATGGGTCATTCGCAATCAAGAAAAAGAAAAAAAACTTTT
TGGTAGGATAATTAAGTATAGAGGAATTTCAAAATGA

Upstream 100 bases:

>100_bases
GTTCATTGTCCACACACTCAAAAAGCTCTAGATCTATCCAAAAGCTCAACCTATAGAGAAAGGTAAAGAGTTACACGAAC
ACTTAATTTCCAAACCTTGC

Downstream 100 bases:

>100_bases
TGATTTTATCTATCACGCAAAGCAAAAGGGCGTTGATATAAAGATAGGGCTTGATATAGCCACTTTAGCGTTGAAAAAAT
TAGTGCAAAAAATCGTTTTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 38; Mature: 37

Protein sequence:

>38_residues
MALRLGYLDEKNARWVIRNQEKEKKLFGRIIKYRGISK

Sequences:

>Translated_38_residues
MALRLGYLDEKNARWVIRNQEKEKKLFGRIIKYRGISK
>Mature_37_residues
ALRLGYLDEKNARWVIRNQEKEKKLFGRIIKYRGISK

Specific function: Unknown

COG id: COG1432

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 4623; Mature: 4491

Theoretical pI: Translated: 11.10; Mature: 11.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALRLGYLDEKNARWVIRNQEKEKKLFGRIIKYRGISK
CCEECCCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
ALRLGYLDEKNARWVIRNQEKEKKLFGRIIKYRGISK
CEECCCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA