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The map label for this gene is 108563643

Identifier: 108563643

GI number: 108563643

Start: 1280382

End: 1282787

Strand: Direct

Name: 108563643

Synonym: HPAG1_1218

Alternate gene names: NA

Gene position: 1280382-1282787 (Clockwise)

Preceding gene: 108563642

Following gene: 108563644

Centisome position: 80.21

GC content: 38.74

Gene sequence:

>2406_bases
TTGTGGCTTAAGTCAAAAATCTTTCTTTTAATGGGCTTATTCTCCCATTCGCTCAACGCCTTAAGCCTCACGCTCACGCA
AGGCAAGGAAGGGGGGGAAGATTTTTCTGTTTTAACCTTACGACACAATAAGGCGTTTTCTTGTTTTTATACCAATGAAA
AACCGCCAAGCGGGATTGAAGCGTCTTTATCCATTATACACGCTAAACGCCCCATAGAATGCGTGATAGACTCCATCCCT
AAGGAGGGTTTTACCCCTTTAGAAAACGCTTTTTTCCATATCACCTATTCTATGCGCCAACAACAATTCATTTTACACAT
CAAACCCAAAGTGATGCGAAGACTCACCCTTTTTTCTTTTGACAGGGATTATAAAAAAGCGATCCCCCTTTTTGTGGAAA
ACGATCCTAAAGCCAAAATGTGGCAAATCATAGGCTATGATCAAAATATCCCTTTTTTGAGCAAAAAAGACAACGCTCAA
AAAGGCTTGAATTTCCCCATTGTCATTAAAGACGCTCAAACCCCTATCATTCAAGAGCTGGATGTGAATAACAAACCCCT
ACTCACCACAAAAGGCTATGACTTAAACGCTTATTTAGAGGCTAAAAAACAAATGGATTCGCAAGCCTATTTTGACGCCC
TACGCACGATCAGCCGCGCGTTTAAAAACTACCCTCAAACGATGTTTAAAAAAGATTTGTATTTGTTAGAAATTATCGCA
TTAGGACAATTAGGCATTAAAAAATCCTTACTCATAGACATTGGCACCCAATGGATTAAAAATTACCCGACTGATCCCAA
TATCCCTGAAGCGCTATACTATGTCGCCAAAGCTTTAGACGAGAACAACAATTACAAACAGGCCATGCGCTATTACAAAC
GCATTCTTTTAGAATACAAAAATTCCCGCTACGCTCCTTTAGCCCAAATGCGTTTAGCCATTGAAGCGGCTGAAGGCTCT
GATTTGAGCAACGCTAACATGCTTTTTAAAGAAGCTTTCTCTAACGCCAAAGACAAAGAGAGCGCGAGTGAAATCGCTCT
TAATTGGGCTGAAGCAGAGATAAACTATCAAAATTTTAATAACGCCAAATACCTCATTGATAAGGTGGTCCAATCCAACC
CTGATTATCTTTCTATGCATAGCGAATTAGCCCTAGACTTGCTCAAGTTATTGAAAAAAAACCAGATGAATGCAAGCGCG
ATTGAGATCGCTCACTTGCTCCTTAATCAAGACGATGACTTGAAAGCTAAAGAGCAAGCGCTCTATGATTTAGGGGCGTT
GTATGCAAGGATCAAGGACTTTAAGAACGCCCACCTTTACAATCTGCAATATTTGCAAGATTATGCGGAATTGGATAAAG
CTTCTGTCGTTAGAGCGCGCGATGAAAAAGCCCTTTTTTCCATGGAGGGGAACACTCAAGAAAAAATCGCCCACTATGAC
AAAATCATTCACAATTTCCCTAATTCTAATGAAGCCCTGAAGGCTTTAGAATTGAAAGCCCAACTCTTGTTTGAAAACAA
GCGTTATGCTGAAGTGTTGAGCATGCAAAAAAATTTGCCTAAAGATTCTCCCTTGATCCAAAAAACGCTCAATATCCTTG
CTAAAACCCCATTAGAGAACCATCGTTGCGAAGAAGCCTTAAAATACTTATCCCAAATCACCGCCTTTGAATTTACCCCC
AAAGAAGAAATCCAAGCCTTTGATTGCTTGTATTTCGCATCGCTCAAAGAAAAAGCGCAAATTATTGCCCTAAACGCTTT
AAAAGCGGCTAAAACCCCTAGCGAAAAATTAATATGGCTTTATCGTTTGGGGCGTAATTACTACCGCTTAGGGGATTTTA
AAAATTCCACTCTGGCTTCTAAAGACGCCTTGATCCTCGCTCAAAGTTTAAATAAAAAAGAATTTTATGATATCGCTTTT
GTTTTATTTTCAGATTACATGCAAAACAATGAAAGAGAATTGGCCCTCAATTTGTATGCGTTTTTAGAAAAGCATTTCAA
AGACGATAAACGCATGGCACTAGTTTATTTTAAATTGCTAGAAAATGAAAAAGACCCTAAAAGCGTCAAAATTTATGCCA
CAAGCTTGCTCAAACTCCAAGACGCTTACAAGGACTATTCTTACACGCCCTTTAGTGAATTTGCCCTTATTGACGCTTAC
AGAACCACCAAAGATTATTCAAAAGCGTTAGAAACGCTAGACAAGCTTTTAAACCGCAGGCTTTCTTTAGAAGATCACCA
AAAAGCCTTATACTTGCAATCCAGCTTATTAGATCTAACCAATCAAAAAGCAAAATCTAAATCCAGTTTAGAAAAATGCG
TTCAGTTAAAACAAAAAGATCAAACAAACGCATGGCAAAATTTATGCGAACAGGGTTTAAATTTATTCAAAAACAAGGAG
TCATGA

Upstream 100 bases:

>100_bases
ATTTACACCCAAAACGCTACCATGCCCATTTATGCGGTCATTATTGCCATGGCGTTAGCGTGCTTGTTCTCTGTTTTTAT
GATGCGAGGGCTTTTAGAAT

Downstream 100 bases:

>100_bases
CATGGACATTAGCATTTTTAGAGAATACGATATTAGAGGCATTTACCCCACCACTTTAGACGAAAAGAGTGCCTTTAGTA
TCGGCGTGGAGTTGGGGAAA

Product: paralysed flagella protein

Products: NA

Alternate protein names: TPR Repeat-Containing Protein; Paralysed Flagella Protein PflA; Paralysed Flagellum Protein PflA; Tetratricopeptide Tpr_1 Repeat-Containing Protein; Tetratricopeptide Repeat-Containing Protein; Tetratricopeptide Repeat Domain Protein

Number of amino acids: Translated: 801; Mature: 801

Protein sequence:

>801_residues
MWLKSKIFLLMGLFSHSLNALSLTLTQGKEGGEDFSVLTLRHNKAFSCFYTNEKPPSGIEASLSIIHAKRPIECVIDSIP
KEGFTPLENAFFHITYSMRQQQFILHIKPKVMRRLTLFSFDRDYKKAIPLFVENDPKAKMWQIIGYDQNIPFLSKKDNAQ
KGLNFPIVIKDAQTPIIQELDVNNKPLLTTKGYDLNAYLEAKKQMDSQAYFDALRTISRAFKNYPQTMFKKDLYLLEIIA
LGQLGIKKSLLIDIGTQWIKNYPTDPNIPEALYYVAKALDENNNYKQAMRYYKRILLEYKNSRYAPLAQMRLAIEAAEGS
DLSNANMLFKEAFSNAKDKESASEIALNWAEAEINYQNFNNAKYLIDKVVQSNPDYLSMHSELALDLLKLLKKNQMNASA
IEIAHLLLNQDDDLKAKEQALYDLGALYARIKDFKNAHLYNLQYLQDYAELDKASVVRARDEKALFSMEGNTQEKIAHYD
KIIHNFPNSNEALKALELKAQLLFENKRYAEVLSMQKNLPKDSPLIQKTLNILAKTPLENHRCEEALKYLSQITAFEFTP
KEEIQAFDCLYFASLKEKAQIIALNALKAAKTPSEKLIWLYRLGRNYYRLGDFKNSTLASKDALILAQSLNKKEFYDIAF
VLFSDYMQNNERELALNLYAFLEKHFKDDKRMALVYFKLLENEKDPKSVKIYATSLLKLQDAYKDYSYTPFSEFALIDAY
RTTKDYSKALETLDKLLNRRLSLEDHQKALYLQSSLLDLTNQKAKSKSSLEKCVQLKQKDQTNAWQNLCEQGLNLFKNKE
S

Sequences:

>Translated_801_residues
MWLKSKIFLLMGLFSHSLNALSLTLTQGKEGGEDFSVLTLRHNKAFSCFYTNEKPPSGIEASLSIIHAKRPIECVIDSIP
KEGFTPLENAFFHITYSMRQQQFILHIKPKVMRRLTLFSFDRDYKKAIPLFVENDPKAKMWQIIGYDQNIPFLSKKDNAQ
KGLNFPIVIKDAQTPIIQELDVNNKPLLTTKGYDLNAYLEAKKQMDSQAYFDALRTISRAFKNYPQTMFKKDLYLLEIIA
LGQLGIKKSLLIDIGTQWIKNYPTDPNIPEALYYVAKALDENNNYKQAMRYYKRILLEYKNSRYAPLAQMRLAIEAAEGS
DLSNANMLFKEAFSNAKDKESASEIALNWAEAEINYQNFNNAKYLIDKVVQSNPDYLSMHSELALDLLKLLKKNQMNASA
IEIAHLLLNQDDDLKAKEQALYDLGALYARIKDFKNAHLYNLQYLQDYAELDKASVVRARDEKALFSMEGNTQEKIAHYD
KIIHNFPNSNEALKALELKAQLLFENKRYAEVLSMQKNLPKDSPLIQKTLNILAKTPLENHRCEEALKYLSQITAFEFTP
KEEIQAFDCLYFASLKEKAQIIALNALKAAKTPSEKLIWLYRLGRNYYRLGDFKNSTLASKDALILAQSLNKKEFYDIAF
VLFSDYMQNNERELALNLYAFLEKHFKDDKRMALVYFKLLENEKDPKSVKIYATSLLKLQDAYKDYSYTPFSEFALIDAY
RTTKDYSKALETLDKLLNRRLSLEDHQKALYLQSSLLDLTNQKAKSKSSLEKCVQLKQKDQTNAWQNLCEQGLNLFKNKE
S
>Mature_801_residues
MWLKSKIFLLMGLFSHSLNALSLTLTQGKEGGEDFSVLTLRHNKAFSCFYTNEKPPSGIEASLSIIHAKRPIECVIDSIP
KEGFTPLENAFFHITYSMRQQQFILHIKPKVMRRLTLFSFDRDYKKAIPLFVENDPKAKMWQIIGYDQNIPFLSKKDNAQ
KGLNFPIVIKDAQTPIIQELDVNNKPLLTTKGYDLNAYLEAKKQMDSQAYFDALRTISRAFKNYPQTMFKKDLYLLEIIA
LGQLGIKKSLLIDIGTQWIKNYPTDPNIPEALYYVAKALDENNNYKQAMRYYKRILLEYKNSRYAPLAQMRLAIEAAEGS
DLSNANMLFKEAFSNAKDKESASEIALNWAEAEINYQNFNNAKYLIDKVVQSNPDYLSMHSELALDLLKLLKKNQMNASA
IEIAHLLLNQDDDLKAKEQALYDLGALYARIKDFKNAHLYNLQYLQDYAELDKASVVRARDEKALFSMEGNTQEKIAHYD
KIIHNFPNSNEALKALELKAQLLFENKRYAEVLSMQKNLPKDSPLIQKTLNILAKTPLENHRCEEALKYLSQITAFEFTP
KEEIQAFDCLYFASLKEKAQIIALNALKAAKTPSEKLIWLYRLGRNYYRLGDFKNSTLASKDALILAQSLNKKEFYDIAF
VLFSDYMQNNERELALNLYAFLEKHFKDDKRMALVYFKLLENEKDPKSVKIYATSLLKLQDAYKDYSYTPFSEFALIDAY
RTTKDYSKALETLDKLLNRRLSLEDHQKALYLQSSLLDLTNQKAKSKSSLEKCVQLKQKDQTNAWQNLCEQGLNLFKNKE
S

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 92585; Mature: 92585

Theoretical pI: Translated: 9.16; Mature: 9.16

Prosite motif: PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWLKSKIFLLMGLFSHSLNALSLTLTQGKEGGEDFSVLTLRHNKAFSCFYTNEKPPSGIE
CCCHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCEEEEEEECCCEEEEEECCCCCCCCCH
ASLSIIHAKRPIECVIDSIPKEGFTPLENAFFHITYSMRQQQFILHIKPKVMRRLTLFSF
HHHHHHCCCCCHHHHHHHCCCCCCCCHHHCEEEEEEECCCCEEEEEECHHHHHHHHHHHC
DRDYKKAIPLFVENDPKAKMWQIIGYDQNIPFLSKKDNAQKGLNFPIVIKDAQTPIIQEL
CCCHHHHCCEEECCCCCCHHEEEEECCCCCCCCCCCCCHHHCCCCCEEEECCCCCHHHHC
DVNNKPLLTTKGYDLNAYLEAKKQMDSQAYFDALRTISRAFKNYPQTMFKKDLYLLEIIA
CCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
LGQLGIKKSLLIDIGTQWIKNYPTDPNIPEALYYVAKALDENNNYKQAMRYYKRILLEYK
HHCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHC
NSRYAPLAQMRLAIEAAEGSDLSNANMLFKEAFSNAKDKESASEIALNWAEAEINYQNFN
CCCCCHHHHHHHHEEECCCCCCCHHHHHHHHHHCCCCCCCCHHHHHEEHHHEEEECCCCC
NAKYLIDKVVQSNPDYLSMHSELALDLLKLLKKNQMNASAIEIAHLLLNQDDDLKAKEQA
CHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHH
LYDLGALYARIKDFKNAHLYNLQYLQDYAELDKASVVRARDEKALFSMEGNTQEKIAHYD
HHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHCHHHHHHHCCCHHEEEECCCCHHHHHHHH
KIIHNFPNSNEALKALELKAQLLFENKRYAEVLSMQKNLPKDSPLIQKTLNILAKTPLEN
HHHHCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCH
HRCEEALKYLSQITAFEFTPKEEIQAFDCLYFASLKEKAQIIALNALKAAKTPSEKLIWL
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEHHHHCCCCCHHEEEH
YRLGRNYYRLGDFKNSTLASKDALILAQSLNKKEFYDIAFVLFSDYMQNNERELALNLYA
HHHCCCCEEECCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHH
FLEKHFKDDKRMALVYFKLLENEKDPKSVKIYATSLLKLQDAYKDYSYTPFSEFALIDAY
HHHHHHCCCHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
RTTKDYSKALETLDKLLNRRLSLEDHQKALYLQSSLLDLTNQKAKSKSSLEKCVQLKQKD
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
QTNAWQNLCEQGLNLFKNKES
CCHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MWLKSKIFLLMGLFSHSLNALSLTLTQGKEGGEDFSVLTLRHNKAFSCFYTNEKPPSGIE
CCCHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCEEEEEEECCCEEEEEECCCCCCCCCH
ASLSIIHAKRPIECVIDSIPKEGFTPLENAFFHITYSMRQQQFILHIKPKVMRRLTLFSF
HHHHHHCCCCCHHHHHHHCCCCCCCCHHHCEEEEEEECCCCEEEEEECHHHHHHHHHHHC
DRDYKKAIPLFVENDPKAKMWQIIGYDQNIPFLSKKDNAQKGLNFPIVIKDAQTPIIQEL
CCCHHHHCCEEECCCCCCHHEEEEECCCCCCCCCCCCCHHHCCCCCEEEECCCCCHHHHC
DVNNKPLLTTKGYDLNAYLEAKKQMDSQAYFDALRTISRAFKNYPQTMFKKDLYLLEIIA
CCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
LGQLGIKKSLLIDIGTQWIKNYPTDPNIPEALYYVAKALDENNNYKQAMRYYKRILLEYK
HHCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHC
NSRYAPLAQMRLAIEAAEGSDLSNANMLFKEAFSNAKDKESASEIALNWAEAEINYQNFN
CCCCCHHHHHHHHEEECCCCCCCHHHHHHHHHHCCCCCCCCHHHHHEEHHHEEEECCCCC
NAKYLIDKVVQSNPDYLSMHSELALDLLKLLKKNQMNASAIEIAHLLLNQDDDLKAKEQA
CHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHH
LYDLGALYARIKDFKNAHLYNLQYLQDYAELDKASVVRARDEKALFSMEGNTQEKIAHYD
HHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHCHHHHHHHCCCHHEEEECCCCHHHHHHHH
KIIHNFPNSNEALKALELKAQLLFENKRYAEVLSMQKNLPKDSPLIQKTLNILAKTPLEN
HHHHCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCH
HRCEEALKYLSQITAFEFTPKEEIQAFDCLYFASLKEKAQIIALNALKAAKTPSEKLIWL
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEHHHHCCCCCHHEEEH
YRLGRNYYRLGDFKNSTLASKDALILAQSLNKKEFYDIAFVLFSDYMQNNERELALNLYA
HHHCCCCEEECCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHH
FLEKHFKDDKRMALVYFKLLENEKDPKSVKIYATSLLKLQDAYKDYSYTPFSEFALIDAY
HHHHHHCCCHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
RTTKDYSKALETLDKLLNRRLSLEDHQKALYLQSSLLDLTNQKAKSKSSLEKCVQLKQKD
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
QTNAWQNLCEQGLNLFKNKES
CCHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA