Click here to switch to the map view.

The map label for this gene is 108563434

Identifier: 108563434

GI number: 108563434

Start: 1063243

End: 1063773

Strand: Reverse

Name: 108563434

Synonym: HPAG1_1009

Alternate gene names: NA

Gene position: 1063773-1063243 (Counterclockwise)

Preceding gene: 108563438

Following gene: 108563432

Centisome position: 66.64

GC content: 37.48

Gene sequence:

>531_bases
ATGCCCTATTCTTTTAAAAAGCGTTTTTTAATCCTTTATGCCCTTTCTACCTTGCTTTTAGTGGGGGTTTTGTTAGCGTT
ATTTTTCTTTTATGCGAAAAATAACCTCTTAGAAAACACCCAAATACGCATGCAATACACCGCTGATGCGATCGCTAAAA
GCCTTTTAGAATTAAATAATGCCTCTTCTTTAGAGCCTTTAAAAATCTTAGAAGAACGATTCAAAAACACCCCCTTTGTC
TTATTAGATGAAGACAACAAAGTCAAGTTTTCTAATATCGGGGCGTTTGTGGCCTCTTTTAAAAATGACGCCTTGATCAA
AACCCCTTATTTTGCGCTTAAAAAACAGGGCTTTTACCTCACAGACAGCCCCCCAACTAACCGCTTAGGGGTTTCTAAAA
TCATTATCGCAGAAGAAGAAATTCAAAAAAATTTTATCCCCCTTTATAAAATGATAGGCTATGTGTTTTTGGGCGCGAGT
TTGTTTGTCGCGCTAATAGCTGGGTGGCTTTACAAGATCCAATCAAACTGA

Upstream 100 bases:

>100_bases
TAAAATTAAATAAATATGGTAGAAAAAAGGGGCTATTTTTGAGCGTTTTTAATCCTAAAAAGCTGTGTTATCCAACCCGC
TATCAACAAAAAGGTTCGTC

Downstream 100 bases:

>100_bases
GTAAAAATTACTTTTCCACCAACACAGGCTTATTTTTAAAGCTTTTAAGTGCATTTTCAAGCTGTTTTAGGGCTTCTTCT
TTCGTTTTATAAGGGCCAAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 176; Mature: 175

Protein sequence:

>176_residues
MPYSFKKRFLILYALSTLLLVGVLLALFFFYAKNNLLENTQIRMQYTADAIAKSLLELNNASSLEPLKILEERFKNTPFV
LLDEDNKVKFSNIGAFVASFKNDALIKTPYFALKKQGFYLTDSPPTNRLGVSKIIIAEEEIQKNFIPLYKMIGYVFLGAS
LFVALIAGWLYKIQSN

Sequences:

>Translated_176_residues
MPYSFKKRFLILYALSTLLLVGVLLALFFFYAKNNLLENTQIRMQYTADAIAKSLLELNNASSLEPLKILEERFKNTPFV
LLDEDNKVKFSNIGAFVASFKNDALIKTPYFALKKQGFYLTDSPPTNRLGVSKIIIAEEEIQKNFIPLYKMIGYVFLGAS
LFVALIAGWLYKIQSN
>Mature_175_residues
PYSFKKRFLILYALSTLLLVGVLLALFFFYAKNNLLENTQIRMQYTADAIAKSLLELNNASSLEPLKILEERFKNTPFVL
LDEDNKVKFSNIGAFVASFKNDALIKTPYFALKKQGFYLTDSPPTNRLGVSKIIIAEEEIQKNFIPLYKMIGYVFLGASL
FVALIAGWLYKIQSN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20054; Mature: 19923

Theoretical pI: Translated: 9.87; Mature: 9.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPYSFKKRFLILYALSTLLLVGVLLALFFFYAKNNLLENTQIRMQYTADAIAKSLLELNN
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECHHHHHHHHHHHCC
ASSLEPLKILEERFKNTPFVLLDEDNKVKFSNIGAFVASFKNDALIKTPYFALKKQGFYL
CCCCCHHHHHHHHHCCCCEEEEECCCCEEHHHHHHHHHHHCCCCEEECCHHHHHCCCEEE
TDSPPTNRLGVSKIIIAEEEIQKNFIPLYKMIGYVFLGASLFVALIAGWLYKIQSN
ECCCCCCCCCCHHEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
PYSFKKRFLILYALSTLLLVGVLLALFFFYAKNNLLENTQIRMQYTADAIAKSLLELNN
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECHHHHHHHHHHHCC
ASSLEPLKILEERFKNTPFVLLDEDNKVKFSNIGAFVASFKNDALIKTPYFALKKQGFYL
CCCCCHHHHHHHHHCCCCEEEEECCCCEEHHHHHHHHHHHCCCCEEECCHHHHHCCCEEE
TDSPPTNRLGVSKIIIAEEEIQKNFIPLYKMIGYVFLGASLFVALIAGWLYKIQSN
ECCCCCCCCCCHHEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA