Definition Helicobacter pylori HPAG1 chromosome, complete genome.
Accession NC_008086
Length 1,596,366

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The map label for this gene is 108563432

Identifier: 108563432

GI number: 108563432

Start: 1062080

End: 1062307

Strand: Reverse

Name: 108563432

Synonym: HPAG1_1007

Alternate gene names: NA

Gene position: 1062307-1062080 (Counterclockwise)

Preceding gene: 108563434

Following gene: 108563431

Centisome position: 66.55

GC content: 32.89

Gene sequence:

>228_bases
ATGCAATCTTTAAGTTTATTAAACCAATTGGGCGCTAAAATTGATGAATTGATTGAAAAAATCCAAAAACAAGAAGAAGA
GTTGAGCGCTTTACGCCAAGCAAACACCACCTTGAATGCACAAAATGAAGAAAAAGACATTCAGATCGCTATTTTATACG
ATGAATTGAGCGCTAAAGATAAGGGTATTCAAGGTCTTTATGACAAAATCTCTGATTTATTGTCATAA

Upstream 100 bases:

>100_bases
AACATGGGGTTTTAGTTACTTTATTTAAGGGGATAGGGGTATTTTGCGATAATCAAATAGCTTTGATATAATAACTTTTA
AAAACCATGAAAGGCTTACT

Downstream 100 bases:

>100_bases
ACCATTAAAAACATGCATTCAGAAAACGACAGCTTAGAAATCACTTATTTAGGCAAACGCTATAAAATCTCTCTCAATAA
CACCTTTAGCGATGAGATGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 75; Mature: 75

Protein sequence:

>75_residues
MQSLSLLNQLGAKIDELIEKIQKQEEELSALRQANTTLNAQNEEKDIQIAILYDELSAKDKGIQGLYDKISDLLS

Sequences:

>Translated_75_residues
MQSLSLLNQLGAKIDELIEKIQKQEEELSALRQANTTLNAQNEEKDIQIAILYDELSAKDKGIQGLYDKISDLLS
>Mature_75_residues
MQSLSLLNQLGAKIDELIEKIQKQEEELSALRQANTTLNAQNEEKDIQIAILYDELSAKDKGIQGLYDKISDLLS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8433; Mature: 8433

Theoretical pI: Translated: 4.17; Mature: 4.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQSLSLLNQLGAKIDELIEKIQKQEEELSALRQANTTLNAQNEEKDIQIAILYDELSAKD
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCCC
KGIQGLYDKISDLLS
CCHHHHHHHHHHHHC
>Mature Secondary Structure
MQSLSLLNQLGAKIDELIEKIQKQEEELSALRQANTTLNAQNEEKDIQIAILYDELSAKD
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCCC
KGIQGLYDKISDLLS
CCHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA