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The map label for this gene is ycfF [C]

Identifier: 108563413

GI number: 108563413

Start: 1040607

End: 1040921

Strand: Reverse

Name: ycfF [C]

Synonym: HPAG1_0988

Alternate gene names: 108563413

Gene position: 1040921-1040607 (Counterclockwise)

Preceding gene: 108563427

Following gene: 108563412

Centisome position: 65.21

GC content: 35.56

Gene sequence:

>315_bases
ATGAATGTGTTTGAAAAAATAATCAAAGGCGAAATCCCTTGTTCTAAGATTTTAGAAAACGAGCGTTTTTTATCCTTTTA
TGACATTAACCCTAAAGCTAAAGTGCATGCATTAGTGATCCCCAAACAAAGCATTCAGGATTTTAATGGCATCACCCCAG
AGCTTATGGCTCAAATGACAAGTTTTATTTTTGAAGTGGTGGAAAAATTAGGCATCAAAGAAAAGGGCTACAAGCTTTTA
ACCAATGTGGGTAAAAACGCCGGCCAAGAGGTGATGCATTTGCATTTTCATATTTTAAGTGGGGATAAACATTAA

Upstream 100 bases:

>100_bases
GCTCTATTAAGGTGTGCAATAACGATCCTTATATTTTATTTTTAAAAAGCTATAATACAACTTTAATACAAAGAAAAACC
TTAAAAGGGAGCAAAAAAGC

Downstream 100 bases:

>100_bases
AAGCGTTGGTGGTATTTTATGCAAGCGTTTTTAAATAGGAGTTTTGCTCCCTTACTCAATCCTAATGAGAGTCCTTTAGA
GCAGGTTAAATCCAGTATTA

Product: ADP hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 104; Mature: 104

Protein sequence:

>104_residues
MNVFEKIIKGEIPCSKILENERFLSFYDINPKAKVHALVIPKQSIQDFNGITPELMAQMTSFIFEVVEKLGIKEKGYKLL
TNVGKNAGQEVMHLHFHILSGDKH

Sequences:

>Translated_104_residues
MNVFEKIIKGEIPCSKILENERFLSFYDINPKAKVHALVIPKQSIQDFNGITPELMAQMTSFIFEVVEKLGIKEKGYKLL
TNVGKNAGQEVMHLHFHILSGDKH
>Mature_104_residues
MNVFEKIIKGEIPCSKILENERFLSFYDINPKAKVHALVIPKQSIQDFNGITPELMAQMTSFIFEVVEKLGIKEKGYKLL
TNVGKNAGQEVMHLHFHILSGDKH

Specific function: Unknown

COG id: COG0537

COG function: function code FGR; Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HIT domain [H]

Homologues:

Organism=Homo sapiens, GI4885413, Length=103, Percent_Identity=37.8640776699029, Blast_Score=76, Evalue=6e-15,
Organism=Escherichia coli, GI1787346, Length=103, Percent_Identity=35.9223300970874, Blast_Score=73, Evalue=3e-15,
Organism=Caenorhabditis elegans, GI17506713, Length=103, Percent_Identity=37.8640776699029, Blast_Score=76, Evalue=3e-15,
Organism=Saccharomyces cerevisiae, GI6320078, Length=97, Percent_Identity=38.1443298969072, Blast_Score=64, Evalue=3e-12,
Organism=Drosophila melanogaster, GI24581222, Length=103, Percent_Identity=34.9514563106796, Blast_Score=73, Evalue=3e-14,
Organism=Drosophila melanogaster, GI28574010, Length=103, Percent_Identity=34.9514563106796, Blast_Score=73, Evalue=4e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011146
- InterPro:   IPR011151
- InterPro:   IPR019808
- InterPro:   IPR001310 [H]

Pfam domain/function: PF01230 HIT [H]

EC number: NA

Molecular weight: Translated: 11855; Mature: 11855

Theoretical pI: Translated: 8.50; Mature: 8.50

Prosite motif: PS00892 HIT_1 ; PS51084 HIT_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNVFEKIIKGEIPCSKILENERFLSFYDINPKAKVHALVIPKQSIQDFNGITPELMAQMT
CCHHHHHHCCCCCHHHHHCCCCEEEEEECCCCCEEEEEECCHHHHHHCCCCCHHHHHHHH
SFIFEVVEKLGIKEKGYKLLTNVGKNAGQEVMHLHFHILSGDKH
HHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHEECCCCC
>Mature Secondary Structure
MNVFEKIIKGEIPCSKILENERFLSFYDINPKAKVHALVIPKQSIQDFNGITPELMAQMT
CCHHHHHHCCCCCHHHHHCCCCEEEEEECCCCCEEEEEECCHHHHHHCCCCCHHHHHHHH
SFIFEVVEKLGIKEKGYKLLTNVGKNAGQEVMHLHFHILSGDKH
HHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9923682 [H]