Definition Helicobacter pylori HPAG1 chromosome, complete genome.
Accession NC_008086
Length 1,596,366

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The map label for this gene is 108563386

Identifier: 108563386

GI number: 108563386

Start: 1009714

End: 1009818

Strand: Reverse

Name: 108563386

Synonym: HPAG1_0961

Alternate gene names: NA

Gene position: 1009818-1009714 (Counterclockwise)

Preceding gene: 108563387

Following gene: 108563382

Centisome position: 63.26

GC content: 40.95

Gene sequence:

>105_bases
TTGAGTGCGAAACAAAACCTTGAAATCATTAAAATCTCTAACGCTCTATCACAAGGTAAGAGCGTGAGCGTTGGCCTTAT
TGCGAGCGTGTTAGAAGACTCATAA

Upstream 100 bases:

>100_bases
AGGCTCTAAAAAGTCAGAGCCATTGATGAGATGAGTAAATAAGAAAAAGAAACCATTAAAAGCCGAGACTATGAGAAGCG
GAATTTGAGTAAGGTATAGA

Downstream 100 bases:

>100_bases
AACCAATGAGCGAGAGTTTTTCACTGATGCGTGCGATTTCTTGAAAAAAGATTATCAAAGAAAGTGATGGATTGTCTGAT
AAAATCACTACCGCTATCAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 34; Mature: 33

Protein sequence:

>34_residues
MSAKQNLEIIKISNALSQGKSVSVGLIASVLEDS

Sequences:

>Translated_34_residues
MSAKQNLEIIKISNALSQGKSVSVGLIASVLEDS
>Mature_33_residues
SAKQNLEIIKISNALSQGKSVSVGLIASVLEDS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 3531; Mature: 3400

Theoretical pI: Translated: 6.62; Mature: 6.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAKQNLEIIKISNALSQGKSVSVGLIASVLEDS
CCCCCCCEEEEECCCCCCCCCCCHHHHHHHHCCC
>Mature Secondary Structure 
SAKQNLEIIKISNALSQGKSVSVGLIASVLEDS
CCCCCCEEEEECCCCCCCCCCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA