Click here to switch to the map view.

The map label for this gene is 108563377

Identifier: 108563377

GI number: 108563377

Start: 997085

End: 998380

Strand: Reverse

Name: 108563377

Synonym: HPAG1_0952

Alternate gene names: NA

Gene position: 998380-997085 (Counterclockwise)

Preceding gene: 108563378

Following gene: 108563376

Centisome position: 62.54

GC content: 39.12

Gene sequence:

>1296_bases
TTGCGATTTAATTCTTTCAAACGCAAAGTCCGGCGTTTTTGTTTGGGGGTAGCTTTTTTAATAAGCGGTGCGGGCACGCT
TGATGCGAAAATTTTTACCCTACAAGAGTTTTTTAAAGAAGTAGAAATTAATTCAATGGAGCTGATCGGCAAAAAAGCCG
ATTTCAAAAGCCGTTTGAATGAGCAACGCTCCGTGAATGCTTGGGATTTTCCCTATATTGATAATGAAACTTCTATGGTG
AAAAACTTCCAAGGCATCATAGAAGCGCAACCCAGAACCCTTTTAATAGTAAGACCCAAGCTCCCATGGGTGAGCTCGCT
TTTATCTAAAAGCCTTTCTATCAAAACCATTCAATACGATAAAAGCTATCAATTGAGTAAAAATCTCGCTTTTATTGGCG
CTAAACGCCTTTATTTGACTTATGTGATGACTAAAGAAAAGTATCAGGTGTATGTGCAACGAGAAGCGAACTTTTATTCG
CAGCTCAAAATCGCTAAAGAAAAAGTCAAAGCCGGTAGCATGAGCGAAAAGGACTATATCAACTTCAATAATTCTTATTT
GGAATCCAAACTCGCTAAAACCAATGTGGAAACCAAACTAATAGATTTAGAAAAAATGCTAGACACGATGCTAGCGATTG
TGGAGCCGGTCAAAGAGGGAGCGCATTTTGACACTTATTTAGACCATTTGCATGATGTCAAGGTGATCGGTTTGGATTTT
GAATACGTGCGCTTAGAACCTGAAGCTTTAAAGTTTAAATTGGATCGCTCGTTGTATGTGGATATTTTGGATTTGACGGC
TAAAGATTATCAGGTGAACGCAAAATTGGCTAATAGAGATGTGTTTAATGCATTTGAATTTGGGATTGGCTCTGAAAGCT
ATAACTCTTCAACCAATCTTTCTATAGCAGTGCGTATCCCTTTGCCGGTAACGCCTAAAAATATCTATCAAAAGCGTAAA
TTCTTGGATTTGCAAAGCGGGACGCTCGCGCAAAATGAAGTGATGAAACGAAACATACGAATCAACGCTAACTCCTACTT
AAACCAGCTCAAAACCAAAGAAGCATACATTGAAACCCAAAAAGAAGCCATTGCCAATAAGAAGCGTTTGATGGAAATGG
GGCGCATCGCTTATGAAGCCCAAAAAATCGGGCTTTTTGAATACTTGATTTATCAAAATTCTTACATGGACGCCCTCATC
ACTCTGGCGGAAGCTAAGATTGAATACATTGATATTAGCGCGCTTTTAGAAGAGACTTTAGGGGAGAGCTTGACCAGATT
AGGAGTATTGCATTGA

Upstream 100 bases:

>100_bases
GTGCTAGTCATGGATAAAGATATAGAAATCCAAAAAAATCGTAAAAATTTCTTGTGGGGCGTGTATCAAAGTTTCTTAGA
GATTGGGGATATTAAAGAAA

Downstream 100 bases:

>100_bases
AGCGGGCGTTATGGTGGCTCATGTTAATGGGTGTTTTTTCAATGGGCGTTTTTTTAGAGGCTAAAGAGTATCCAGAAATT
GTTTTAGAAGAAAAAAACTT

Product: hypothetical protein

Products: NA

Alternate protein names: Cadmium-Zinc-Nickel Outer Membrane Efflux Protein CznC

Number of amino acids: Translated: 431; Mature: 431

Protein sequence:

>431_residues
MRFNSFKRKVRRFCLGVAFLISGAGTLDAKIFTLQEFFKEVEINSMELIGKKADFKSRLNEQRSVNAWDFPYIDNETSMV
KNFQGIIEAQPRTLLIVRPKLPWVSSLLSKSLSIKTIQYDKSYQLSKNLAFIGAKRLYLTYVMTKEKYQVYVQREANFYS
QLKIAKEKVKAGSMSEKDYINFNNSYLESKLAKTNVETKLIDLEKMLDTMLAIVEPVKEGAHFDTYLDHLHDVKVIGLDF
EYVRLEPEALKFKLDRSLYVDILDLTAKDYQVNAKLANRDVFNAFEFGIGSESYNSSTNLSIAVRIPLPVTPKNIYQKRK
FLDLQSGTLAQNEVMKRNIRINANSYLNQLKTKEAYIETQKEAIANKKRLMEMGRIAYEAQKIGLFEYLIYQNSYMDALI
TLAEAKIEYIDISALLEETLGESLTRLGVLH

Sequences:

>Translated_431_residues
MRFNSFKRKVRRFCLGVAFLISGAGTLDAKIFTLQEFFKEVEINSMELIGKKADFKSRLNEQRSVNAWDFPYIDNETSMV
KNFQGIIEAQPRTLLIVRPKLPWVSSLLSKSLSIKTIQYDKSYQLSKNLAFIGAKRLYLTYVMTKEKYQVYVQREANFYS
QLKIAKEKVKAGSMSEKDYINFNNSYLESKLAKTNVETKLIDLEKMLDTMLAIVEPVKEGAHFDTYLDHLHDVKVIGLDF
EYVRLEPEALKFKLDRSLYVDILDLTAKDYQVNAKLANRDVFNAFEFGIGSESYNSSTNLSIAVRIPLPVTPKNIYQKRK
FLDLQSGTLAQNEVMKRNIRINANSYLNQLKTKEAYIETQKEAIANKKRLMEMGRIAYEAQKIGLFEYLIYQNSYMDALI
TLAEAKIEYIDISALLEETLGESLTRLGVLH
>Mature_431_residues
MRFNSFKRKVRRFCLGVAFLISGAGTLDAKIFTLQEFFKEVEINSMELIGKKADFKSRLNEQRSVNAWDFPYIDNETSMV
KNFQGIIEAQPRTLLIVRPKLPWVSSLLSKSLSIKTIQYDKSYQLSKNLAFIGAKRLYLTYVMTKEKYQVYVQREANFYS
QLKIAKEKVKAGSMSEKDYINFNNSYLESKLAKTNVETKLIDLEKMLDTMLAIVEPVKEGAHFDTYLDHLHDVKVIGLDF
EYVRLEPEALKFKLDRSLYVDILDLTAKDYQVNAKLANRDVFNAFEFGIGSESYNSSTNLSIAVRIPLPVTPKNIYQKRK
FLDLQSGTLAQNEVMKRNIRINANSYLNQLKTKEAYIETQKEAIANKKRLMEMGRIAYEAQKIGLFEYLIYQNSYMDALI
TLAEAKIEYIDISALLEETLGESLTRLGVLH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 49739; Mature: 49739

Theoretical pI: Translated: 9.54; Mature: 9.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRFNSFKRKVRRFCLGVAFLISGAGTLDAKIFTLQEFFKEVEINSMELIGKKADFKSRLN
CCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCHHHHHCCCCHHHHHHC
EQRSVNAWDFPYIDNETSMVKNFQGIIEAQPRTLLIVRPKLPWVSSLLSKSLSIKTIQYD
CCCCCCCCCCCCCCCCHHHHHHHHHHEECCCCEEEEECCCCHHHHHHHHCCCEEEEEEEC
KSYQLSKNLAFIGAKRLYLTYVMTKEKYQVYVQREANFYSQLKIAKEKVKAGSMSEKDYI
CCCCCCCCCHHEEHHEEEEEEEEECCEEEEEEEECCCHHHHHHHHHHHHHCCCCCCCCCC
NFNNSYLESKLAKTNVETKLIDLEKMLDTMLAIVEPVKEGAHFDTYLDHLHDVKVIGLDF
CCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCEEEEECE
EYVRLEPEALKFKLDRSLYVDILDLTAKDYQVNAKLANRDVFNAFEFGIGSESYNSSTNL
EEEEECHHHHEEEECCCEEEEEEECCCCCEEEEEEECCCHHHHHHHHCCCCCCCCCCCCE
SIAVRIPLPVTPKNIYQKRKFLDLQSGTLAQNEVMKRNIRINANSYLNQLKTKEAYIETQ
EEEEEECCCCCCHHHHHHHHHEECCCCCCHHHHHHHHCEEECHHHHHHHHHHHHHHHHHH
KEAIANKKRLMEMGRIAYEAQKIGLFEYLIYQNSYMDALITLAEAKIEYIDISALLEETL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHEEEEHHHHHHHHHH
GESLTRLGVLH
HHHHHHHCCCC
>Mature Secondary Structure
MRFNSFKRKVRRFCLGVAFLISGAGTLDAKIFTLQEFFKEVEINSMELIGKKADFKSRLN
CCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCHHHHHCCCCHHHHHHC
EQRSVNAWDFPYIDNETSMVKNFQGIIEAQPRTLLIVRPKLPWVSSLLSKSLSIKTIQYD
CCCCCCCCCCCCCCCCHHHHHHHHHHEECCCCEEEEECCCCHHHHHHHHCCCEEEEEEEC
KSYQLSKNLAFIGAKRLYLTYVMTKEKYQVYVQREANFYSQLKIAKEKVKAGSMSEKDYI
CCCCCCCCCHHEEHHEEEEEEEEECCEEEEEEEECCCHHHHHHHHHHHHHCCCCCCCCCC
NFNNSYLESKLAKTNVETKLIDLEKMLDTMLAIVEPVKEGAHFDTYLDHLHDVKVIGLDF
CCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCEEEEECE
EYVRLEPEALKFKLDRSLYVDILDLTAKDYQVNAKLANRDVFNAFEFGIGSESYNSSTNL
EEEEECHHHHEEEECCCEEEEEEECCCCCEEEEEEECCCHHHHHHHHCCCCCCCCCCCCE
SIAVRIPLPVTPKNIYQKRKFLDLQSGTLAQNEVMKRNIRINANSYLNQLKTKEAYIETQ
EEEEEECCCCCCHHHHHHHHHEECCCCCCHHHHHHHHCEEECHHHHHHHHHHHHHHHHHH
KEAIANKKRLMEMGRIAYEAQKIGLFEYLIYQNSYMDALITLAEAKIEYIDISALLEETL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHEEEEHHHHHHHHHH
GESLTRLGVLH
HHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA