Definition Helicobacter pylori HPAG1 chromosome, complete genome.
Accession NC_008086
Length 1,596,366

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The map label for this gene is lgt [H]

Identifier: 108563364

GI number: 108563364

Start: 980374

End: 981213

Strand: Reverse

Name: lgt [H]

Synonym: HPAG1_0939

Alternate gene names: 108563364

Gene position: 981213-980374 (Counterclockwise)

Preceding gene: 108563365

Following gene: 108563363

Centisome position: 61.47

GC content: 39.88

Gene sequence:

>840_bases
ATGAACGCTTGGAATACGATTTATGATCAATTTAACCCTATCGCTTTTAGTCTTGGCAGTATTGAAGTGCATTGGTATGG
TTTGGCGTATGCGTGCGCGATTGTTACCGCTTTTTATATGGCGTTAAGAATGATCCAAAAAGATCCCAAGCGATTCCCCA
TTGAAAGGAAGGAATTTGAGAGTTATTTTCTATGGGCGGAGCTTGGCATTGTGCTAGGGGCAAGGATAGGATACATTCTT
ATTTATGAGCCTAATTCCAGCTATTATTTGACGCATTTTTGGCAAATCTTTAACCCTTTTGATAGCCATGGGAATTTTGT
AGGCATTCGTGGGATGAGCTATCATGGGGGGTTGGTGGGGTTTTTGATCGCTTCGTATCTTTATAGCCGTAAGGATCTGA
AAAAGCTTTTGATTTATTTGGATTTGATTGCGATTAGCCTGCCTTTAGGGTATGTTTTTGGGAGGATTGGGAATTTTTTA
AACCAGGAGCTTGTGGGGAGGATTGTCCCCAAAGACAGCCATTTAGGGCAAATCATAGGCATTATGGTGGATAATCAATT
GCGTTATCCCAGCCAATTGATTGAAGCGTTTTTAGAGGGGGTTATCGTGTTTTTAATGGTAATGTGGGCTAAAAAACACA
CCAAAACGCGTGGGTTGCTGATTGTGGTTTATGGCTTGGGGTATTCCTTGATGCGCTTTATTGCGGAATTTTACAGAGAG
CCGGATAGCCAAATGGGGGTTTATTTTTTAAATTTGAGCATGGGGCAGATTTTAAGCTTATTTATGGTAATTGTTTCGTT
AGGGATTTTATTGTATGCTACGAAAAATTCTAAAAAATAA

Upstream 100 bases:

>100_bases
CTCCGCTAAAAGGTTGATGCTCCATGCGCATAAAATCGCGCTACTAGGGTATGAATTTGAAGCGATCCCCCCTAAAGAAT
TTGAATTTTAAGGATTGATC

Downstream 100 bases:

>100_bases
AGGAAAATCAATGAAATTTTTGGATCAAGAAAAAAGAAGACGATTATTAAACGAGCGCCATTCTTGCAAGATGTTTGATA
GCCATTATGAGTTTTCTAGC

Product: prolipoprotein diacylglyceryl transferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 279; Mature: 279

Protein sequence:

>279_residues
MNAWNTIYDQFNPIAFSLGSIEVHWYGLAYACAIVTAFYMALRMIQKDPKRFPIERKEFESYFLWAELGIVLGARIGYIL
IYEPNSSYYLTHFWQIFNPFDSHGNFVGIRGMSYHGGLVGFLIASYLYSRKDLKKLLIYLDLIAISLPLGYVFGRIGNFL
NQELVGRIVPKDSHLGQIIGIMVDNQLRYPSQLIEAFLEGVIVFLMVMWAKKHTKTRGLLIVVYGLGYSLMRFIAEFYRE
PDSQMGVYFLNLSMGQILSLFMVIVSLGILLYATKNSKK

Sequences:

>Translated_279_residues
MNAWNTIYDQFNPIAFSLGSIEVHWYGLAYACAIVTAFYMALRMIQKDPKRFPIERKEFESYFLWAELGIVLGARIGYIL
IYEPNSSYYLTHFWQIFNPFDSHGNFVGIRGMSYHGGLVGFLIASYLYSRKDLKKLLIYLDLIAISLPLGYVFGRIGNFL
NQELVGRIVPKDSHLGQIIGIMVDNQLRYPSQLIEAFLEGVIVFLMVMWAKKHTKTRGLLIVVYGLGYSLMRFIAEFYRE
PDSQMGVYFLNLSMGQILSLFMVIVSLGILLYATKNSKK
>Mature_279_residues
MNAWNTIYDQFNPIAFSLGSIEVHWYGLAYACAIVTAFYMALRMIQKDPKRFPIERKEFESYFLWAELGIVLGARIGYIL
IYEPNSSYYLTHFWQIFNPFDSHGNFVGIRGMSYHGGLVGFLIASYLYSRKDLKKLLIYLDLIAISLPLGYVFGRIGNFL
NQELVGRIVPKDSHLGQIIGIMVDNQLRYPSQLIEAFLEGVIVFLMVMWAKKHTKTRGLLIVVYGLGYSLMRFIAEFYRE
PDSQMGVYFLNLSMGQILSLFMVIVSLGILLYATKNSKK

Specific function: Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins [H]

COG id: COG0682

COG function: function code M; Prolipoprotein diacylglyceryltransferase

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the lgt family [H]

Homologues:

Organism=Escherichia coli, GI1789192, Length=292, Percent_Identity=30.8219178082192, Blast_Score=147, Evalue=7e-37,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001640 [H]

Pfam domain/function: PF01790 LGT [H]

EC number: 2.4.99.- [C]

Molecular weight: Translated: 32079; Mature: 32079

Theoretical pI: Translated: 9.45; Mature: 9.45

Prosite motif: PS01311 LGT

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNAWNTIYDQFNPIAFSLGSIEVHWYGLAYACAIVTAFYMALRMIQKDPKRFPIERKEFE
CCCHHHHHHCCCCCEEEECCEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHH
SYFLWAELGIVLGARIGYILIYEPNSSYYLTHFWQIFNPFDSHGNFVGIRGMSYHGGLVG
HHHHHHHHHHHHHCCCCEEEEECCCCCEEHHHHHHHHCCCCCCCCEEEEECCCCCCHHHH
FLIASYLYSRKDLKKLLIYLDLIAISLPLGYVFGRIGNFLNQELVGRIVPKDSHLGQIIG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH
IMVDNQLRYPSQLIEAFLEGVIVFLMVMWAKKHTKTRGLLIVVYGLGYSLMRFIAEFYRE
HEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHC
PDSQMGVYFLNLSMGQILSLFMVIVSLGILLYATKNSKK
CCCCCCEEEEECCHHHHHHHHHHHHHHHHHEEECCCCCC
>Mature Secondary Structure
MNAWNTIYDQFNPIAFSLGSIEVHWYGLAYACAIVTAFYMALRMIQKDPKRFPIERKEFE
CCCHHHHHHCCCCCEEEECCEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHH
SYFLWAELGIVLGARIGYILIYEPNSSYYLTHFWQIFNPFDSHGNFVGIRGMSYHGGLVG
HHHHHHHHHHHHHCCCCEEEEECCCCCEEHHHHHHHHCCCCCCCCEEEEECCCCCCHHHH
FLIASYLYSRKDLKKLLIYLDLIAISLPLGYVFGRIGNFLNQELVGRIVPKDSHLGQIIG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH
IMVDNQLRYPSQLIEAFLEGVIVFLMVMWAKKHTKTRGLLIVVYGLGYSLMRFIAEFYRE
HEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHC
PDSQMGVYFLNLSMGQILSLFMVIVSLGILLYATKNSKK
CCCCCCEEEEECCHHHHHHHHHHHHHHHHHEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA