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The map label for this gene is 108563301

Identifier: 108563301

GI number: 108563301

Start: 913627

End: 915861

Strand: Reverse

Name: 108563301

Synonym: HPAG1_0876

Alternate gene names: NA

Gene position: 915861-913627 (Counterclockwise)

Preceding gene: 108563303

Following gene: 108563299

Centisome position: 57.37

GC content: 45.37

Gene sequence:

>2235_bases
ATGAAAAAACACATCCTTTCATTAACTTTAGGATCGCTTTTAGTTTCCACTTTGAGCGCTGAAGACGACGGCTTTTACAT
GAGTGCGGGCTATCAAATCGGTGAAGCCGCTCAAATGGTGAAAAACACCAAAGGCATTCAAGAGCTTTCAGACAATTATG
AAAACTTGAGCAATCTTTTAACCCGATACAGCACCCTAAACACCCTTATCAAATTGTCCGCTGATCCGAGTGCTGTCAAT
GCGGCTCGTGAAAATCTGGGCGCGAGCGCGAAGAACTTGATCGGCGATACCAAAAATTCCCCCGCCTATCAAGCCGTGCT
TTTAGCGATCAACGCGGCGGTGGGGTTTTGGAATGTCGTAGGCTATGTTACGCAATGCGGGGGTAACGCTAATGGTCAAA
AAAGCACCTCTTCAACAACCATCTTCAACAACGAGCCAGGGTATCGATCCACTTCCATCACTTGCTCTTTGAACGGACAT
ATGCCTGGATACTATGGCCCTATGAGCATTGAAAATTTCAAAAAGCTTAACGAAGCCTACCAGATCCTCCAAACGGCTTT
AAAAAACGGCTTGCCCGCGCTCAAAGAAAACAACGGCACGGTGAATGTAACCTACAGCTACACATGCTCAGGGGAAGGGA
ATGATAACTGCTCGCTACAAACCACAGGTGTAACCAATCAAAATAACGGAACCAAGACTGAAACCCAAACCATAGACGGC
AAAAGCGTAACCACCACGATCAGTTCAAAAGTCGTTGATAGCCAAGCATATGGTAATACAACAGGAGTCTCCTACACCGA
AATCACTAACAAATTAGACGGTGTGCCTGATAGCGCTCAAGCGCTCTTAGCGCAGGCTAGCACGCTCATCAACACCATCA
ACACGGCATGCCCGTATTTCCATGCTAATAATAGTAGTGAGGCTAACGCCCCAAAATTCTCTACTACTACTGGGAAAATA
TGCGGCGCTTTTTCAGAAGAAATCAGCGCGATCCAAAAGATGATCACGGACGCGCAAGAGCTGGTCAATCAAACGAGCGT
CATTAACGAGCATGAACAATCAACCCCAATAGGCAATAATAATGGCAAGCCATTCAACCCTTTCACAGACGCTAGCTTTG
CGCAAGGCATGCTCGCTAACGCTAGTGCGCAAGCTAAAATGCTCAATTTAGCCCATCAAGTGGGGCAAACCATTAACCCT
GACAATCTTACCGGGAATTTTAAAAATTTTGTTACAGGCTTTTTAGCCACATGCAACAACCCCTCAACAGCTGGCACTGG
CGGCACACAAGGTTCAGCTCCTGGCACGGTTACCACTCAAACTTTCGCTTCCGGTTGCGCCTATGTGGAACAAACCATAA
CGAATCTAACCAACAGTATCGCTCATTTTGGCACTCAAGAGCAGCAGATACAGCAAGCCGAAAACATCGCTGACACTCTA
GTGAATTTCAAATCTAGATACAGCGAATTAGGGAACACTTATAACAGCATCACCACTGCGCTCTCCAAAGTCCCTAACGC
GCAAAGCTTGCAAAACGTGGTGAGCAAAAAGAATAACCCCTATAGCCCACAAGGCATAGAAACCAATTACTATCTCAATC
AAAATTCTTACAACCAAATCCAAACCATCAACCAAGAACTCGGGCGTAACCCCTTTAGGAAAGTGGGTATTGTTGGTTCT
CAAACCAATAACGGCGCCATGAATGGGATCGGTATCCAGGTGGGCTATAAGCAATTCTTTGGCCAAAAAAGAAAATGGGG
CGCTAGGTATTACGGCTTTTTTGATTACAACCATGCGTTTATTAAATCCAGCTTCTTCAACTCGGCTTCTGATGTATGGA
CTTATGGCTTTGGAGCGGACGCTCTCTATAACTTCATCAACGATAAAGCCACCAATTTCTTAGGCAAGAACAACAAGCTT
TCTGTGGGGCTTTTTGGAGGCATTGCGTTAGCGGGCACTTCATGGCTCAATTCTGAATACGTGAATTTAGCCACCGTGAA
TAATGTCTATAACGCTAAAATGAATGTGGCGAATTTCCAATTCTTATTCAACATGGGAGTGAGGATGAATTTAGCCAGGC
CTAAGAAAAAAGGCAGCGATCATGCGGCTCAGCATGGGATTGAGTTAGGCGTGAAAATCCCTACCATCAACACGAACTAC
TACTCCTTTATGGGGGCTGAACTCAAATACCGAAGGCTCTATAGCGTGTATTTGAATTACGTGTTCGCTTACTAG

Upstream 100 bases:

>100_bases
ATGCAAATGCGTTCTAATGCAAATGCGTTCTAATGCAAATGTATTCTAATGTATAAAATCCCTAATACTAATCCAATTTA
ATCCAAAAAGGAGAAAAAAC

Downstream 100 bases:

>100_bases
AAGCTAAAAACCCTTTGTGAAATTCCCTTTTTGAAACTCCCTTTTTAGGGGAGAACCCTTTGTTTTAAACCCTTTGTTTT
AAATTTTTGAACTTTTTTTT

Product: outer membrane protein BabA

Products: NA

Alternate protein names: Outer Membrane Protein HorA; Outer Membrane Protein HopQ; Outer Membrane Protein HopZ; Outer Membrane Protein(Omp4) HopW Protein SabB; Outer Membrane Protein/Porin; Outer Membrane Protein HopW Protein (; Outer Membrane Protein HorC; Outer Membrane Protein HorJ; Outer Membrane Protein SabB/HopO; Outer Membrane Protein HopA; Outer Membrane Protein BabA; Outer Membrane Protein HopD; Outer Membrane Protein Adhesin; Outer Membrane Protein ,Adhesin BabA BabB; Outer Membrane Protein Omp; Outer Membrane Function; Outer Membrane Protein HorK; Outer Membrane Protein HorF; Outer Membrane Protein HopB; Adhesin; Outer Membrane Protein HopE; Outer Membrane Protein HorL; Outer Membrane Protein HopL; Outer Membrane Protein HopC; Outer Membrane Protein,HopV BabB BabA; Outer Membrane Protein HorB; Outer Membrane Protein HopF; Outer Membrane Protein HopG

Number of amino acids: Translated: 744; Mature: 744

Protein sequence:

>744_residues
MKKHILSLTLGSLLVSTLSAEDDGFYMSAGYQIGEAAQMVKNTKGIQELSDNYENLSNLLTRYSTLNTLIKLSADPSAVN
AARENLGASAKNLIGDTKNSPAYQAVLLAINAAVGFWNVVGYVTQCGGNANGQKSTSSTTIFNNEPGYRSTSITCSLNGH
MPGYYGPMSIENFKKLNEAYQILQTALKNGLPALKENNGTVNVTYSYTCSGEGNDNCSLQTTGVTNQNNGTKTETQTIDG
KSVTTTISSKVVDSQAYGNTTGVSYTEITNKLDGVPDSAQALLAQASTLINTINTACPYFHANNSSEANAPKFSTTTGKI
CGAFSEEISAIQKMITDAQELVNQTSVINEHEQSTPIGNNNGKPFNPFTDASFAQGMLANASAQAKMLNLAHQVGQTINP
DNLTGNFKNFVTGFLATCNNPSTAGTGGTQGSAPGTVTTQTFASGCAYVEQTITNLTNSIAHFGTQEQQIQQAENIADTL
VNFKSRYSELGNTYNSITTALSKVPNAQSLQNVVSKKNNPYSPQGIETNYYLNQNSYNQIQTINQELGRNPFRKVGIVGS
QTNNGAMNGIGIQVGYKQFFGQKRKWGARYYGFFDYNHAFIKSSFFNSASDVWTYGFGADALYNFINDKATNFLGKNNKL
SVGLFGGIALAGTSWLNSEYVNLATVNNVYNAKMNVANFQFLFNMGVRMNLARPKKKGSDHAAQHGIELGVKIPTINTNY
YSFMGAELKYRRLYSVYLNYVFAY

Sequences:

>Translated_744_residues
MKKHILSLTLGSLLVSTLSAEDDGFYMSAGYQIGEAAQMVKNTKGIQELSDNYENLSNLLTRYSTLNTLIKLSADPSAVN
AARENLGASAKNLIGDTKNSPAYQAVLLAINAAVGFWNVVGYVTQCGGNANGQKSTSSTTIFNNEPGYRSTSITCSLNGH
MPGYYGPMSIENFKKLNEAYQILQTALKNGLPALKENNGTVNVTYSYTCSGEGNDNCSLQTTGVTNQNNGTKTETQTIDG
KSVTTTISSKVVDSQAYGNTTGVSYTEITNKLDGVPDSAQALLAQASTLINTINTACPYFHANNSSEANAPKFSTTTGKI
CGAFSEEISAIQKMITDAQELVNQTSVINEHEQSTPIGNNNGKPFNPFTDASFAQGMLANASAQAKMLNLAHQVGQTINP
DNLTGNFKNFVTGFLATCNNPSTAGTGGTQGSAPGTVTTQTFASGCAYVEQTITNLTNSIAHFGTQEQQIQQAENIADTL
VNFKSRYSELGNTYNSITTALSKVPNAQSLQNVVSKKNNPYSPQGIETNYYLNQNSYNQIQTINQELGRNPFRKVGIVGS
QTNNGAMNGIGIQVGYKQFFGQKRKWGARYYGFFDYNHAFIKSSFFNSASDVWTYGFGADALYNFINDKATNFLGKNNKL
SVGLFGGIALAGTSWLNSEYVNLATVNNVYNAKMNVANFQFLFNMGVRMNLARPKKKGSDHAAQHGIELGVKIPTINTNY
YSFMGAELKYRRLYSVYLNYVFAY
>Mature_744_residues
MKKHILSLTLGSLLVSTLSAEDDGFYMSAGYQIGEAAQMVKNTKGIQELSDNYENLSNLLTRYSTLNTLIKLSADPSAVN
AARENLGASAKNLIGDTKNSPAYQAVLLAINAAVGFWNVVGYVTQCGGNANGQKSTSSTTIFNNEPGYRSTSITCSLNGH
MPGYYGPMSIENFKKLNEAYQILQTALKNGLPALKENNGTVNVTYSYTCSGEGNDNCSLQTTGVTNQNNGTKTETQTIDG
KSVTTTISSKVVDSQAYGNTTGVSYTEITNKLDGVPDSAQALLAQASTLINTINTACPYFHANNSSEANAPKFSTTTGKI
CGAFSEEISAIQKMITDAQELVNQTSVINEHEQSTPIGNNNGKPFNPFTDASFAQGMLANASAQAKMLNLAHQVGQTINP
DNLTGNFKNFVTGFLATCNNPSTAGTGGTQGSAPGTVTTQTFASGCAYVEQTITNLTNSIAHFGTQEQQIQQAENIADTL
VNFKSRYSELGNTYNSITTALSKVPNAQSLQNVVSKKNNPYSPQGIETNYYLNQNSYNQIQTINQELGRNPFRKVGIVGS
QTNNGAMNGIGIQVGYKQFFGQKRKWGARYYGFFDYNHAFIKSSFFNSASDVWTYGFGADALYNFINDKATNFLGKNNKL
SVGLFGGIALAGTSWLNSEYVNLATVNNVYNAKMNVANFQFLFNMGVRMNLARPKKKGSDHAAQHGIELGVKIPTINTNY
YSFMGAELKYRRLYSVYLNYVFAY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 80465; Mature: 80465

Theoretical pI: Translated: 8.57; Mature: 8.57

Prosite motif: PS00678 WD_REPEATS_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKHILSLTLGSLLVSTLSAEDDGFYMSAGYQIGEAAQMVKNTKGIQELSDNYENLSNLL
CCCHHHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TRYSTLNTLIKLSADPSAVNAARENLGASAKNLIGDTKNSPAYQAVLLAINAAVGFWNVV
HHHHHHHHHEEECCCCHHHHHHHHHCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH
GYVTQCGGNANGQKSTSSTTIFNNEPGYRSTSITCSLNGHMPGYYGPMSIENFKKLNEAY
HHHHHCCCCCCCCCCCCCCEEECCCCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHH
QILQTALKNGLPALKENNGTVNVTYSYTCSGEGNDNCSLQTTGVTNQNNGTKTETQTIDG
HHHHHHHHCCCCCEECCCCEEEEEEEEEECCCCCCCCEEEECCCCCCCCCCCCCEEECCC
KSVTTTISSKVVDSQAYGNTTGVSYTEITNKLDGVPDSAQALLAQASTLINTINTACPYF
CEEEEHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCEE
HANNSSEANAPKFSTTTGKICGAFSEEISAIQKMITDAQELVNQTSVINEHEQSTPIGNN
ECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCCCCCC
NGKPFNPFTDASFAQGMLANASAQAKMLNLAHQVGQTINPDNLTGNFKNFVTGFLATCNN
CCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCC
PSTAGTGGTQGSAPGTVTTQTFASGCAYVEQTITNLTNSIAHFGTQEQQIQQAENIADTL
CCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
VNFKSRYSELGNTYNSITTALSKVPNAQSLQNVVSKKNNPYSPQGIETNYYLNQNSYNQI
HHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCEEEEECCCCHHHH
QTINQELGRNPFRKVGIVGSQTNNGAMNGIGIQVGYKQFFGQKRKWGARYYGFFDYNHAF
HHHHHHHCCCCCHHCCEEECCCCCCCCCCEEEEECHHHHCCCHHCCCCEEEEEECCCHHH
IKSSFFNSASDVWTYGFGADALYNFINDKATNFLGKNNKLSVGLFGGIALAGTSWLNSEY
HHHHHCCCCCHHEEECCCHHHHHHHHHHHHHHHCCCCCCEEEEEECCHHHHCCHHCCCCC
VNLATVNNVYNAKMNVANFQFLFNMGVRMNLARPKKKGSDHAAQHGIELGVKIPTINTNY
EEEEEECCHHHCEECHHHEEEEECCCCEEECCCCCCCCCCHHHHCCCEEEEEECEECCCH
YSFMGAELKYRRLYSVYLNYVFAY
HHHHCCHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKKHILSLTLGSLLVSTLSAEDDGFYMSAGYQIGEAAQMVKNTKGIQELSDNYENLSNLL
CCCHHHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TRYSTLNTLIKLSADPSAVNAARENLGASAKNLIGDTKNSPAYQAVLLAINAAVGFWNVV
HHHHHHHHHEEECCCCHHHHHHHHHCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH
GYVTQCGGNANGQKSTSSTTIFNNEPGYRSTSITCSLNGHMPGYYGPMSIENFKKLNEAY
HHHHHCCCCCCCCCCCCCCEEECCCCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHH
QILQTALKNGLPALKENNGTVNVTYSYTCSGEGNDNCSLQTTGVTNQNNGTKTETQTIDG
HHHHHHHHCCCCCEECCCCEEEEEEEEEECCCCCCCCEEEECCCCCCCCCCCCCEEECCC
KSVTTTISSKVVDSQAYGNTTGVSYTEITNKLDGVPDSAQALLAQASTLINTINTACPYF
CEEEEHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCEE
HANNSSEANAPKFSTTTGKICGAFSEEISAIQKMITDAQELVNQTSVINEHEQSTPIGNN
ECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCCCCCC
NGKPFNPFTDASFAQGMLANASAQAKMLNLAHQVGQTINPDNLTGNFKNFVTGFLATCNN
CCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCC
PSTAGTGGTQGSAPGTVTTQTFASGCAYVEQTITNLTNSIAHFGTQEQQIQQAENIADTL
CCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
VNFKSRYSELGNTYNSITTALSKVPNAQSLQNVVSKKNNPYSPQGIETNYYLNQNSYNQI
HHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCEEEEECCCCHHHH
QTINQELGRNPFRKVGIVGSQTNNGAMNGIGIQVGYKQFFGQKRKWGARYYGFFDYNHAF
HHHHHHHCCCCCHHCCEEECCCCCCCCCCEEEEECHHHHCCCHHCCCCEEEEEECCCHHH
IKSSFFNSASDVWTYGFGADALYNFINDKATNFLGKNNKLSVGLFGGIALAGTSWLNSEY
HHHHHCCCCCHHEEECCCHHHHHHHHHHHHHHHCCCCCCEEEEEECCHHHHCCHHCCCCC
VNLATVNNVYNAKMNVANFQFLFNMGVRMNLARPKKKGSDHAAQHGIELGVKIPTINTNY
EEEEEECCHHHCEECHHHEEEEECCCCEEECCCCCCCCCCHHHHCCCEEEEEECEECCCH
YSFMGAELKYRRLYSVYLNYVFAY
HHHHCCHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA