| Definition | Helicobacter pylori HPAG1 chromosome, complete genome. |
|---|---|
| Accession | NC_008086 |
| Length | 1,596,366 |
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The map label for this gene is dut [H]
Identifier: 108563273
GI number: 108563273
Start: 882844
End: 883281
Strand: Reverse
Name: dut [H]
Synonym: HPAG1_0848
Alternate gene names: 108563273
Gene position: 883281-882844 (Counterclockwise)
Preceding gene: 108563274
Following gene: 108563272
Centisome position: 55.33
GC content: 42.69
Gene sequence:
>438_bases ATGAAAATTAAAATCCAAAAAATCCACCCAAACGCCCTTATCCCTAAATACCAAACCGAGGGTTCTTCAGGTTTTGATTT GCACGCTGTAGAAGAAGTAACGATCAAACCTCATAGCGTGGGGTTGGTGAAAATAGGGATTTGTTTGTCTTTAGAAGTGG GGTATGAATTGCAAGTGCGCACCCGTAGCGGTTTGGCTTTGAACCATCAGGTGATGGTGTTAAACTCTCCTGGCACGGTG GATAATGATTATAGGGGCGAAATTAAGGTCATTTTAGCGAATTTGAGCGATAAAGATTTTAAAGTCCAAGTAGGGGATAG GATCGCTCAAGGGGTGGTTCAAAAAACTTATAAAGCCGAATTTATAGAATGCGAACAATTAGATGAAACTTCAAGGGGTA GCGGGGGGTTTGGCAGCACAGGAGTGAGTAAGGCATGA
Upstream 100 bases:
>100_bases TTGATAGGTAAGAGTAAGGGCGATGCGGTGAGCATTCAATTGCCTAATGGCGAAAGCGATTTTGAAATTTTAGACATTTA TTATAAAGAGATTTGTTTTG
Downstream 100 bases:
>100_bases GTATTAAGGAAAATTTAGAGCAAGTTAAAAACGAATTTAAAAGCGATGAAAAGCTTTTAGAAGGAGCGTTTAGATTAGAA AAGTTTTTCAAACGCTACAA
Product: deoxyuridine 5'-triphosphate nucleotidohydrolase
Products: NA
Alternate protein names: dUTPase; dUTP pyrophosphatase [H]
Number of amino acids: Translated: 145; Mature: 145
Protein sequence:
>145_residues MKIKIQKIHPNALIPKYQTEGSSGFDLHAVEEVTIKPHSVGLVKIGICLSLEVGYELQVRTRSGLALNHQVMVLNSPGTV DNDYRGEIKVILANLSDKDFKVQVGDRIAQGVVQKTYKAEFIECEQLDETSRGSGGFGSTGVSKA
Sequences:
>Translated_145_residues MKIKIQKIHPNALIPKYQTEGSSGFDLHAVEEVTIKPHSVGLVKIGICLSLEVGYELQVRTRSGLALNHQVMVLNSPGTV DNDYRGEIKVILANLSDKDFKVQVGDRIAQGVVQKTYKAEFIECEQLDETSRGSGGFGSTGVSKA >Mature_145_residues MKIKIQKIHPNALIPKYQTEGSSGFDLHAVEEVTIKPHSVGLVKIGICLSLEVGYELQVRTRSGLALNHQVMVLNSPGTV DNDYRGEIKVILANLSDKDFKVQVGDRIAQGVVQKTYKAEFIECEQLDETSRGSGGFGSTGVSKA
Specific function: This enzyme is involved in nucleotide metabolism:it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA [H]
COG id: COG0756
COG function: function code F; dUTPase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the dUTPase family [H]
Homologues:
Organism=Homo sapiens, GI70906444, Length=141, Percent_Identity=38.2978723404255, Blast_Score=104, Evalue=3e-23, Organism=Homo sapiens, GI4503423, Length=141, Percent_Identity=38.2978723404255, Blast_Score=104, Evalue=3e-23, Organism=Homo sapiens, GI70906441, Length=141, Percent_Identity=38.2978723404255, Blast_Score=104, Evalue=3e-23, Organism=Escherichia coli, GI1790071, Length=147, Percent_Identity=33.3333333333333, Blast_Score=85, Evalue=2e-18, Organism=Caenorhabditis elegans, GI71988561, Length=141, Percent_Identity=40.4255319148936, Blast_Score=114, Evalue=2e-26, Organism=Saccharomyces cerevisiae, GI6319729, Length=140, Percent_Identity=37.1428571428571, Blast_Score=102, Evalue=3e-23, Organism=Drosophila melanogaster, GI19921126, Length=140, Percent_Identity=36.4285714285714, Blast_Score=94, Evalue=4e-20, Organism=Drosophila melanogaster, GI24583610, Length=140, Percent_Identity=36.4285714285714, Blast_Score=93, Evalue=5e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008180 - InterPro: IPR008181 [H]
Pfam domain/function: PF00692 dUTPase [H]
EC number: =3.6.1.23 [H]
Molecular weight: Translated: 15785; Mature: 15785
Theoretical pI: Translated: 7.57; Mature: 7.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIKIQKIHPNALIPKYQTEGSSGFDLHAVEEVTIKPHSVGLVKIGICLSLEVGYELQVR CEEEEEEECCCCCCCCEECCCCCCCEEEEEEEEEECCCCCCEEEEEEEEEEECCCEEEEE TRSGLALNHQVMVLNSPGTVDNDYRGEIKVILANLSDKDFKVQVGDRIAQGVVQKTYKAE ECCCEEECEEEEEECCCCCCCCCCCCEEEEEEECCCCCCEEEEECHHHHHHHHHHHHHCC FIECEQLDETSRGSGGFGSTGVSKA EEECCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MKIKIQKIHPNALIPKYQTEGSSGFDLHAVEEVTIKPHSVGLVKIGICLSLEVGYELQVR CEEEEEEECCCCCCCCEECCCCCCCEEEEEEEEEECCCCCCEEEEEEEEEEECCCEEEEE TRSGLALNHQVMVLNSPGTVDNDYRGEIKVILANLSDKDFKVQVGDRIAQGVVQKTYKAE ECCCEEECEEEEEECCCCCCCCCCCCEEEEEEECCCCCCEEEEECHHHHHHHHHHHHHCC FIECEQLDETSRGSGGFGSTGVSKA EEECCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA