Definition Helicobacter pylori HPAG1 chromosome, complete genome.
Accession NC_008086
Length 1,596,366

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The map label for this gene is 108563164

Identifier: 108563164

GI number: 108563164

Start: 776545

End: 776784

Strand: Direct

Name: 108563164

Synonym: HPAG1_0739

Alternate gene names: NA

Gene position: 776545-776784 (Clockwise)

Preceding gene: 108563163

Following gene: 108563165

Centisome position: 48.64

GC content: 31.25

Gene sequence:

>240_bases
ATGAACTCGCCTAACATTTTATTAGATTCCTTTAAAATCGCTCTTGTTAAAAAAGATTCTAAGCAAGCCTTTTCATTGAT
AGAGCGCCTTTCTTTAGAGCAAATAAAAAATTTAGATTTAGACACGCTTTTAAGCCTTAAGGAAATGATAGCCCAAAGCA
TTGAACTATTAGAAAAAGAAAAAGAAGAACTGCAATCACAAATGCATAAGGCTAAGAAGATTCAAAAATTCTTGTCTTAG

Upstream 100 bases:

>100_bases
GTTTTAACGCAGGCCAATGTGGAAAATGATGCGAGTAAGATTGATTTAGTGTTGAATGTGGCTAGGGGGTTGTTAGAAGC
ATGGAGAGAAATCCATTCAG

Downstream 100 bases:

>100_bases
ATTTTTTAAACTACGATACAATAAAAGCACTATTTTTATTGAAGGCTAAAGGTTGTCTGAACCCATAGATAGATTCACGC
GCATAAGGTGGTTGTTTAAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 79; Mature: 79

Protein sequence:

>79_residues
MNSPNILLDSFKIALVKKDSKQAFSLIERLSLEQIKNLDLDTLLSLKEMIAQSIELLEKEKEELQSQMHKAKKIQKFLS

Sequences:

>Translated_79_residues
MNSPNILLDSFKIALVKKDSKQAFSLIERLSLEQIKNLDLDTLLSLKEMIAQSIELLEKEKEELQSQMHKAKKIQKFLS
>Mature_79_residues
MNSPNILLDSFKIALVKKDSKQAFSLIERLSLEQIKNLDLDTLLSLKEMIAQSIELLEKEKEELQSQMHKAKKIQKFLS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9144; Mature: 9144

Theoretical pI: Translated: 9.11; Mature: 9.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSPNILLDSFKIALVKKDSKQAFSLIERLSLEQIKNLDLDTLLSLKEMIAQSIELLEKE
CCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
KEELQSQMHKAKKIQKFLS
HHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure
MNSPNILLDSFKIALVKKDSKQAFSLIERLSLEQIKNLDLDTLLSLKEMIAQSIELLEKE
CCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
KEELQSQMHKAKKIQKFLS
HHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA