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The map label for this gene is fliS [H]

Identifier: 108563163

GI number: 108563163

Start: 776178

End: 776558

Strand: Direct

Name: fliS [H]

Synonym: HPAG1_0738

Alternate gene names: 108563163

Gene position: 776178-776558 (Clockwise)

Preceding gene: 108563162

Following gene: 108563164

Centisome position: 48.62

GC content: 39.37

Gene sequence:

>381_bases
ATGCAATACGCTAACGCTTATCAAGCCTACCAGCATAACCGAGTGAGTGTGGAATCCCCGGCAAAACTCATTGAAATGCT
TTATGAAGGGATTTTGAGATTTTCCTCGCAAGCCAAACGCTGTATTGAAAATGAAGACATTGAAAAGAAAATTTATTATA
TTAACAGGGTTACGGATATTTTCACGGAATTGTTGAATATTTTAGATTATGAAAAAGGGGGGGAAGTGGCGGTGTATCTT
ACGGGCTTATACACCCATCAAATCAAAGTTTTAACGCAGGCCAATGTGGAAAATGATGCGAGTAAGATTGATTTAGTGTT
GAATGTGGCTAGGGGGTTGTTAGAAGCATGGAGAGAAATCCATTCAGATGAACTCGCCTAA

Upstream 100 bases:

>100_bases
CAATCAAAAATTCAATTCCGTGCAAATGATGATCGATCAAGCGGCGGCTAAAAAGAATTAAAAACAGAGAGTTATTAATT
TTAAAGGATAAAGGAACATT

Downstream 100 bases:

>100_bases
CATTTTATTAGATTCCTTTAAAATCGCTCTTGTTAAAAAAGATTCTAAGCAAGCCTTTTCATTGATAGAGCGCCTTTCTT
TAGAGCAAATAAAAAATTTA

Product: flagellar protein FliS

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 126; Mature: 126

Protein sequence:

>126_residues
MQYANAYQAYQHNRVSVESPAKLIEMLYEGILRFSSQAKRCIENEDIEKKIYYINRVTDIFTELLNILDYEKGGEVAVYL
TGLYTHQIKVLTQANVENDASKIDLVLNVARGLLEAWREIHSDELA

Sequences:

>Translated_126_residues
MQYANAYQAYQHNRVSVESPAKLIEMLYEGILRFSSQAKRCIENEDIEKKIYYINRVTDIFTELLNILDYEKGGEVAVYL
TGLYTHQIKVLTQANVENDASKIDLVLNVARGLLEAWREIHSDELA
>Mature_126_residues
MQYANAYQAYQHNRVSVESPAKLIEMLYEGILRFSSQAKRCIENEDIEKKIYYINRVTDIFTELLNILDYEKGGEVAVYL
TGLYTHQIKVLTQANVENDASKIDLVLNVARGLLEAWREIHSDELA

Specific function: Not Known. [C]

COG id: COG1516

COG function: function code NUO; Flagellin-specific chaperone FliS

Gene ontology:

Cell location: Cytoplasm, cytosol (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliS family [H]

Homologues:

None

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003713 [H]

Pfam domain/function: PF02561 FliS [H]

EC number: NA

Molecular weight: Translated: 14543; Mature: 14543

Theoretical pI: Translated: 4.77; Mature: 4.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQYANAYQAYQHNRVSVESPAKLIEMLYEGILRFSSQAKRCIENEDIEKKIYYINRVTDI
CCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
FTELLNILDYEKGGEVAVYLTGLYTHQIKVLTQANVENDASKIDLVLNVARGLLEAWREI
HHHHHHHHCCCCCCCEEEEEEHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH
HSDELA
HCCCCC
>Mature Secondary Structure
MQYANAYQAYQHNRVSVESPAKLIEMLYEGILRFSSQAKRCIENEDIEKKIYYINRVTDI
CCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
FTELLNILDYEKGGEVAVYLTGLYTHQIKVLTQANVENDASKIDLVLNVARGLLEAWREI
HHHHHHHHCCCCCCCEEEEEEHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH
HSDELA
HCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1527488; 11677609 [H]