Definition Helicobacter pylori HPAG1 chromosome, complete genome.
Accession NC_008086
Length 1,596,366

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The map label for this gene is 108563159

Identifier: 108563159

GI number: 108563159

Start: 771611

End: 772417

Strand: Direct

Name: 108563159

Synonym: HPAG1_0734

Alternate gene names: NA

Gene position: 771611-772417 (Clockwise)

Preceding gene: 108563158

Following gene: 108563160

Centisome position: 48.34

GC content: 34.57

Gene sequence:

>807_bases
ATGAATACTCTTAAAAAGCATTTAGCCTTTATCATTCCCCTAGTAGCGTTATTGTTTAGCTTGGAGTGCGTGTTATTTAT
CAATCAAGCGATAGAACAAAAAGAAAAAAAATTGATTGAAGATTATTCGGTCGTGTTGGCCAGCACGCAAAAATTAAGCT
TGGAATTGTTGCGTCAAAATTTTAGCGAAATCATAGCGTTAAAAGAAATTGATCCTAATTATTCTTTAGAGCCTCTTCAA
AAAACTTTAGGCATAGACGGGCTTAAGGAATTAAGAAAAAATTTACCCTTTTTTTATTCTTTACAACTTTCCACATTCCC
CACTCAAGAGCGTTTAGAAAACATTAAAGAAAAATTGCTCAAAATCCCTGGCGTTCAAAAAGTTGAAGTCTTTGCCAAAA
CTTACATGCAAGTGTATGATCTCTTGAGTTTTATTAAAACAGCGGTCTATATCTTTGCGTTAGTGGTCTTTGTCTTATCG
GTTTTATTGATGTTTAAACAAGTCCGCATCTGGATCTATCAATACCATGAGAGGTTAGAAATCATGGATTTATTAGGGGC
TTCGGTGTCTTTTAAAAACAGGTTTTTGTATAAAATAGCTTTAATGGATTCTTTAATCGCTAGTTTTTTAGCCCCCATGC
TCATGCTCTATACCACTTCGCAAAAAGGTTTTGAAAAAACGATGGATACTTTGGGTATTATAGGAGGCGCGTTTGTTTTA
AACCATTTTTTATGGGGACTGCTTTTTAGCCTTGTGGTCTCATTTGTTTCTGTTTTACTTGTAGCTTGGAGGACTAGACA
TGTATAA

Upstream 100 bases:

>100_bases
AACACGCAATTAAACGCTACGATCGTAGTGGTTACGCACAAATTCCCTAAAAATTTTAGCGCTTATCACCGAAAATTTTA
TATAGAAGATGGGGAAGTTT

Downstream 100 bases:

>100_bases
ATTAGGGGTGTTTTTGTTAGCCACCTTACTATCTGCTAACACGCAAAAAGTAAGCGATATTGCTAAAGATATCCAGCATA
AAGAAACCCTTTTGAAAAAA

Product: cell division membrane protein

Products: NA

Alternate protein names: Integral Membrane Protein

Number of amino acids: Translated: 268; Mature: 268

Protein sequence:

>268_residues
MNTLKKHLAFIIPLVALLFSLECVLFINQAIEQKEKKLIEDYSVVLASTQKLSLELLRQNFSEIIALKEIDPNYSLEPLQ
KTLGIDGLKELRKNLPFFYSLQLSTFPTQERLENIKEKLLKIPGVQKVEVFAKTYMQVYDLLSFIKTAVYIFALVVFVLS
VLLMFKQVRIWIYQYHERLEIMDLLGASVSFKNRFLYKIALMDSLIASFLAPMLMLYTTSQKGFEKTMDTLGIIGGAFVL
NHFLWGLLFSLVVSFVSVLLVAWRTRHV

Sequences:

>Translated_268_residues
MNTLKKHLAFIIPLVALLFSLECVLFINQAIEQKEKKLIEDYSVVLASTQKLSLELLRQNFSEIIALKEIDPNYSLEPLQ
KTLGIDGLKELRKNLPFFYSLQLSTFPTQERLENIKEKLLKIPGVQKVEVFAKTYMQVYDLLSFIKTAVYIFALVVFVLS
VLLMFKQVRIWIYQYHERLEIMDLLGASVSFKNRFLYKIALMDSLIASFLAPMLMLYTTSQKGFEKTMDTLGIIGGAFVL
NHFLWGLLFSLVVSFVSVLLVAWRTRHV
>Mature_268_residues
MNTLKKHLAFIIPLVALLFSLECVLFINQAIEQKEKKLIEDYSVVLASTQKLSLELLRQNFSEIIALKEIDPNYSLEPLQ
KTLGIDGLKELRKNLPFFYSLQLSTFPTQERLENIKEKLLKIPGVQKVEVFAKTYMQVYDLLSFIKTAVYIFALVVFVLS
VLLMFKQVRIWIYQYHERLEIMDLLGASVSFKNRFLYKIALMDSLIASFLAPMLMLYTTSQKGFEKTMDTLGIIGGAFVL
NHFLWGLLFSLVVSFVSVLLVAWRTRHV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30962; Mature: 30962

Theoretical pI: Translated: 9.67; Mature: 9.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure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HHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA