Click here to switch to the map view.

The map label for this gene is 108563099

Identifier: 108563099

GI number: 108563099

Start: 707082

End: 707441

Strand: Direct

Name: 108563099

Synonym: HPAG1_0674

Alternate gene names: NA

Gene position: 707082-707441 (Clockwise)

Preceding gene: 108563098

Following gene: 108563100

Centisome position: 44.29

GC content: 36.11

Gene sequence:

>360_bases
TTGGATTTAATGGATAGCTTGAGCCATTATGGATCCGTTAGGGGGTTGAATCTAAATGGCGTTTGCTCTATGATGAATAT
TCCTGGTAAATTTGATGTGAGCGGGGATTTAGTGCATGCGATTTATTACAACCCCCATTTAAGCCAAAAGGAGAAAAAAG
GCATTATTGATAGCTATTGTCAGAGCGATGTGCTTAACACTTACTGGCTTTTTTTAAAATACGAAGTGTTGAAAGGGGCT
TTAAATAAGGAGCAATACCTTGGGCTATTGAATGATTTTTTAGCCAAATTCCCTAAAGAAAAATCCTATTCAAGCGTTTT
TACTAACGCTTTAGAGAAAGAGATTAGGGAGTTTATTTAA

Upstream 100 bases:

>100_bases
ATTTTAGAAAAACTATCTATTGGAATTTTTCAAAAACCCCTAAAAATATTTTTTATGATTGTGGGAAAATTACCGCGCGC
GTTATAGCGAGCAGTTCCAT

Downstream 100 bases:

>100_bases
AATTCTATTAAAACCCTGAAACTAGGTAAAGACTGCTTAGAAAGAAATTTTTTAAAGCGTTAGAGAAACATGAGCCTAAA
GCGCATATCTGCTTGATTTT

Product: hypothetical protein

Products: NA

Alternate protein names: Polysaccharide Biosynthesis Protein WlaX; 3-5' Exonuclease PolB-Like Protein; Large-Conductance Mechanosensitive Channel

Number of amino acids: Translated: 119; Mature: 119

Protein sequence:

>119_residues
MDLMDSLSHYGSVRGLNLNGVCSMMNIPGKFDVSGDLVHAIYYNPHLSQKEKKGIIDSYCQSDVLNTYWLFLKYEVLKGA
LNKEQYLGLLNDFLAKFPKEKSYSSVFTNALEKEIREFI

Sequences:

>Translated_119_residues
MDLMDSLSHYGSVRGLNLNGVCSMMNIPGKFDVSGDLVHAIYYNPHLSQKEKKGIIDSYCQSDVLNTYWLFLKYEVLKGA
LNKEQYLGLLNDFLAKFPKEKSYSSVFTNALEKEIREFI
>Mature_119_residues
MDLMDSLSHYGSVRGLNLNGVCSMMNIPGKFDVSGDLVHAIYYNPHLSQKEKKGIIDSYCQSDVLNTYWLFLKYEVLKGA
LNKEQYLGLLNDFLAKFPKEKSYSSVFTNALEKEIREFI

Specific function: Unknown

COG id: COG3298

COG function: function code L; Predicted 3'-5' exonuclease related to the exonuclease domain of PolB

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13640; Mature: 13640

Theoretical pI: Translated: 6.78; Mature: 6.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDLMDSLSHYGSVRGLNLNGVCSMMNIPGKFDVSGDLVHAIYYNPHLSQKEKKGIIDSYC
CCHHHHHHHHCCCCCCCCCCHHHHCCCCCCCCCCCCEEEEEEECCCCCCHHHCCHHHHHH
QSDVLNTYWLFLKYEVLKGALNKEQYLGLLNDFLAKFPKEKSYSSVFTNALEKEIREFI
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHC
>Mature Secondary Structure
MDLMDSLSHYGSVRGLNLNGVCSMMNIPGKFDVSGDLVHAIYYNPHLSQKEKKGIIDSYC
CCHHHHHHHHCCCCCCCCCCHHHHCCCCCCCCCCCCEEEEEEECCCCCCHHHCCHHHHHH
QSDVLNTYWLFLKYEVLKGALNKEQYLGLLNDFLAKFPKEKSYSSVFTNALEKEIREFI
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA