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The map label for this gene is 108563096

Identifier: 108563096

GI number: 108563096

Start: 703975

End: 704805

Strand: Direct

Name: 108563096

Synonym: HPAG1_0671

Alternate gene names: NA

Gene position: 703975-704805 (Clockwise)

Preceding gene: 108563093

Following gene: 108563097

Centisome position: 44.1

GC content: 38.03

Gene sequence:

>831_bases
ATGCGAAAGGAGCGTGTAATGTTGTGCGTGTTTGATATAGAAACCATTCCTAGCGTGAGCTTGTGTAAAGAGCATTTCCA
ATTAGAAGAAAATGAGGCGCTAAAAATCTGTGAATGGAGTTTTGAAAAGCAAAAAGAAAAAAGCGGGAGCGAGTTTTTGC
CTCTTTATTTGCATGAAATCATCTCTATTGCAGCAGTCATTGGCGATGATTACGGGCAATTTATCAAAGTGGGGAATTTT
GGTCAAAAACACGAGAATAAAGAGGATTTTACAAGCGAAAAAGAGCTTTTAGAAGATTTTTTTAGATACTTTAACGAAAA
ACAACCGCGCTTAATAAGCTTCAATGGCAGAGGTTTTGATATGCCTCTACTCACGCTCAAAGCCCTTAAATACAATTTAA
CCTTAGACGCTTTTTACAGCCAAGAAAACAAATGGGAGAATTACCGTGCACGCTATAGCGAGCAGTTCCATTTGGATTTA
ATGGATAGCTTGAGCCATTATGGATCCGTTAGGGGGTTGAATTTGAACGGCATTTGCTCTATGACGAATATTCCTGGTAA
ATTTGATGTGAGCGGGGACTTAGTGCATGCGATTTATTACAACCCGCATTTAAGCCAAAAGGAGAAAAAAGGCATTATTG
ATGGCTATTGCCAGAGCGATGTGCTTAACACTTACTGGCTTTTTTTAAAATACGAAGTGTTGAAAGGGGCTTTAAATAAG
GAGCAATACCTTGGGCTATTGAGCGATTTTTTAGAAAAATTCCCTAAAGAAAAATCCTATTCAAGCGTTTTTATTAACGC
TTTAGAGAAAGAGATTAGGGAGTTTGCTTGA

Upstream 100 bases:

>100_bases
TTTTTTTAATTTTTGGTTATATCGTTTTGATATTAAAAGTTAGCACTATAGCGCTATAAGACTAATTGTTATATAATAAA
AGCGAGACAAGAATGTTAAA

Downstream 100 bases:

>100_bases
AGTTTTATAATTGTATAAACAATCTATCTAATATTTTTAATAAAGAGTCTTTTATGCCTACAATATCAAAAAATAAACCA
TATAGTTTTATTAAAAACCT

Product: hypothetical protein

Products: NA

Alternate protein names: Polysaccharide Biosynthesis Protein; 3-5' Exonuclease PolB-Like Protein; Propable PolB; Polysaccharide Biosynthesis Protein WlaX; Lipoprotein SmpA/OmlA Family; 3&Apos; Large-Conductance Mechanosensitive Channel

Number of amino acids: Translated: 276; Mature: 276

Protein sequence:

>276_residues
MRKERVMLCVFDIETIPSVSLCKEHFQLEENEALKICEWSFEKQKEKSGSEFLPLYLHEIISIAAVIGDDYGQFIKVGNF
GQKHENKEDFTSEKELLEDFFRYFNEKQPRLISFNGRGFDMPLLTLKALKYNLTLDAFYSQENKWENYRARYSEQFHLDL
MDSLSHYGSVRGLNLNGICSMTNIPGKFDVSGDLVHAIYYNPHLSQKEKKGIIDGYCQSDVLNTYWLFLKYEVLKGALNK
EQYLGLLSDFLEKFPKEKSYSSVFINALEKEIREFA

Sequences:

>Translated_276_residues
MRKERVMLCVFDIETIPSVSLCKEHFQLEENEALKICEWSFEKQKEKSGSEFLPLYLHEIISIAAVIGDDYGQFIKVGNF
GQKHENKEDFTSEKELLEDFFRYFNEKQPRLISFNGRGFDMPLLTLKALKYNLTLDAFYSQENKWENYRARYSEQFHLDL
MDSLSHYGSVRGLNLNGICSMTNIPGKFDVSGDLVHAIYYNPHLSQKEKKGIIDGYCQSDVLNTYWLFLKYEVLKGALNK
EQYLGLLSDFLEKFPKEKSYSSVFINALEKEIREFA
>Mature_276_residues
MRKERVMLCVFDIETIPSVSLCKEHFQLEENEALKICEWSFEKQKEKSGSEFLPLYLHEIISIAAVIGDDYGQFIKVGNF
GQKHENKEDFTSEKELLEDFFRYFNEKQPRLISFNGRGFDMPLLTLKALKYNLTLDAFYSQENKWENYRARYSEQFHLDL
MDSLSHYGSVRGLNLNGICSMTNIPGKFDVSGDLVHAIYYNPHLSQKEKKGIIDGYCQSDVLNTYWLFLKYEVLKGALNK
EQYLGLLSDFLEKFPKEKSYSSVFINALEKEIREFA

Specific function: Unknown

COG id: COG3298

COG function: function code L; Predicted 3'-5' exonuclease related to the exonuclease domain of PolB

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32303; Mature: 32303

Theoretical pI: Translated: 5.45; Mature: 5.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKERVMLCVFDIETIPSVSLCKEHFQLEENEALKICEWSFEKQKEKSGSEFLPLYLHEI
CCCCEEEEEEEECCCCCCHHHHHHHHCCCCCCCEEHHHHHHHHHHHCCCCCCHHHHHHHH
ISIAAVIGDDYGQFIKVGNFGQKHENKEDFTSEKELLEDFFRYFNEKQPRLISFNGRGFD
HHHHHHHCCCCHHEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCC
MPLLTLKALKYNLTLDAFYSQENKWENYRARYSEQFHLDLMDSLSHYGSVRGLNLNGICS
CHHHHHHHHHHEEEEEHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCEEE
MTNIPGKFDVSGDLVHAIYYNPHLSQKEKKGIIDGYCQSDVLNTYWLFLKYEVLKGALNK
ECCCCCCCCCCCCEEEEEEECCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCH
EQYLGLLSDFLEKFPKEKSYSSVFINALEKEIREFA
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MRKERVMLCVFDIETIPSVSLCKEHFQLEENEALKICEWSFEKQKEKSGSEFLPLYLHEI
CCCCEEEEEEEECCCCCCHHHHHHHHCCCCCCCEEHHHHHHHHHHHCCCCCCHHHHHHHH
ISIAAVIGDDYGQFIKVGNFGQKHENKEDFTSEKELLEDFFRYFNEKQPRLISFNGRGFD
HHHHHHHCCCCHHEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCC
MPLLTLKALKYNLTLDAFYSQENKWENYRARYSEQFHLDLMDSLSHYGSVRGLNLNGICS
CHHHHHHHHHHEEEEEHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCEEE
MTNIPGKFDVSGDLVHAIYYNPHLSQKEKKGIIDGYCQSDVLNTYWLFLKYEVLKGALNK
ECCCCCCCCCCCCEEEEEEECCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCH
EQYLGLLSDFLEKFPKEKSYSSVFINALEKEIREFA
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA