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The map label for this gene is fliP [H]

Identifier: 108563093

GI number: 108563093

Start: 698588

End: 699334

Strand: Direct

Name: fliP [H]

Synonym: HPAG1_0668

Alternate gene names: 108563093

Gene position: 698588-699334 (Clockwise)

Preceding gene: 108563083

Following gene: 108563096

Centisome position: 43.76

GC content: 38.42

Gene sequence:

>747_bases
TTGCGTTTTTTCATTTTTTTAATCCTCATTTGCCCTTTAATATGCCCTTTAATGAGCGCTGATAGCGCTTTGCCTAGCGT
CAATCTCTCTTTAAACGCTCCTAATGATCCTAAACAGCTTGTAACCACCCTTAATGTCATTGCCCTGCTCACGCTTTTAG
TTTTAGCCCCGTCATTGATTTTAGTGATGACGAGTTTCACCCGTTTGATCGTGGTGTTTTCTTTTTTAAGGACCGCTTTA
GGCACGCAACAAACCCCACCCACTCAAATTTTAGTCTCGCTCTCTTTGATATTGACTTTTTTTATCATGGAACCTAGCTT
GAAAAAGGCTTATGATACAGGGATTAAACCTTATATGGATAAAAAAATTTCTTACACCGAAGCGTTTGAAAAAAGCGCTC
TGCCTTTCAAGGAATTCATGCTTAAAAACACACGAGAAAAGGATCTAGCCCTTTTTTTTAGGATCAGAAACCTCCCTAAC
CCTAAAACCCCTGATGAGGTGAGTTTGAGCGTTTTAATCCCAGCGTTTATGATAAGCGAGTTGAAAACAGCGTTTCAAAT
CGGCTTTTTACTTTACTTGCCTTTTTTGGTGATTGATATGGTGATCAGCTCTATTTTAATGGCGATGGGCATGATGATGC
TCCCGCCTGTAATGATTTCTCTGCCTTTTAAAATTTTAGTGTTTATTCTGGTAGATGGGTTTAATTTATTGACCGAAAAT
TTAGTAGCGAGTTTTAAAATGGTTTGA

Upstream 100 bases:

>100_bases
GTATGATTACAGAAAGCATTAAAATCCTTTTTTTAGGGAATTTTAACATGCCTTATCTTATAATTTGACTTCGTTTTATC
AAAGATTTAAGGCTAGAATT

Downstream 100 bases:

>100_bases
TATTAAAAACATTCAAGCCATAAAAGCTTGAAGCTAGTTTAAAACTCATAATTCAAATACGCTGTAATGGATCTCCCTGG
TGCGGGCTCTCTTCCTGTAG

Product: flagellar biosynthesis protein FliP

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 248; Mature: 248

Protein sequence:

>248_residues
MRFFIFLILICPLICPLMSADSALPSVNLSLNAPNDPKQLVTTLNVIALLTLLVLAPSLILVMTSFTRLIVVFSFLRTAL
GTQQTPPTQILVSLSLILTFFIMEPSLKKAYDTGIKPYMDKKISYTEAFEKSALPFKEFMLKNTREKDLALFFRIRNLPN
PKTPDEVSLSVLIPAFMISELKTAFQIGFLLYLPFLVIDMVISSILMAMGMMMLPPVMISLPFKILVFILVDGFNLLTEN
LVASFKMV

Sequences:

>Translated_248_residues
MRFFIFLILICPLICPLMSADSALPSVNLSLNAPNDPKQLVTTLNVIALLTLLVLAPSLILVMTSFTRLIVVFSFLRTAL
GTQQTPPTQILVSLSLILTFFIMEPSLKKAYDTGIKPYMDKKISYTEAFEKSALPFKEFMLKNTREKDLALFFRIRNLPN
PKTPDEVSLSVLIPAFMISELKTAFQIGFLLYLPFLVIDMVISSILMAMGMMMLPPVMISLPFKILVFILVDGFNLLTEN
LVASFKMV
>Mature_248_residues
MRFFIFLILICPLICPLMSADSALPSVNLSLNAPNDPKQLVTTLNVIALLTLLVLAPSLILVMTSFTRLIVVFSFLRTAL
GTQQTPPTQILVSLSLILTFFIMEPSLKKAYDTGIKPYMDKKISYTEAFEKSALPFKEFMLKNTREKDLALFFRIRNLPN
PKTPDEVSLSVLIPAFMISELKTAFQIGFLLYLPFLVIDMVISSILMAMGMMMLPPVMISLPFKILVFILVDGFNLLTEN
LVASFKMV

Specific function: May be a component of the flagellum. It is required for normal cell division. May be implicated in the secretion of virulence factors [H]

COG id: COG1338

COG function: function code NU; Flagellar biosynthesis pathway, component FliP

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential). Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliP/mopC/spaP family [H]

Homologues:

Organism=Escherichia coli, GI1788259, Length=233, Percent_Identity=48.9270386266094, Blast_Score=224, Evalue=4e-60,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005837
- InterPro:   IPR005838 [H]

Pfam domain/function: PF00813 FliP [H]

EC number: NA

Molecular weight: Translated: 27840; Mature: 27840

Theoretical pI: Translated: 9.45; Mature: 9.45

Prosite motif: PS01060 FLIP_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
6.0 %Met     (Translated Protein)
6.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
6.0 %Met     (Mature Protein)
6.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHCCC
>Mature Secondary Structure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HHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7601828; 11259647 [H]