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The map label for this gene is ycjS [C]

Identifier: 108563086

GI number: 108563086

Start: 691345

End: 692292

Strand: Reverse

Name: ycjS [C]

Synonym: HPAG1_0661

Alternate gene names: 108563086

Gene position: 692292-691345 (Counterclockwise)

Preceding gene: 108563087

Following gene: 108563085

Centisome position: 43.37

GC content: 39.87

Gene sequence:

>948_bases
ATGCTTTTTGCGATGATTGGTTCAGGGGGGTTTATCGCTCCCAAGCACTTGCAAGCGATTAGAGATACAGGGCATTTTTT
GGATTGCTCTTTTGATATTCATGATAGCGTGGGGGTTTTAGATGAGTATTTCCCGCAATCAGAGTTTTTTACAAACATTG
AAGATTTTGAAAAGCATTTAGAACAATCTAAGGCTATGGGTAAAGAAATCAACTATTTGAGTGTTTGCACGCCCACACAC
ACGCATTTTGATCACATCCGTTTCGGGCTAAAATACGGCATGCATGTGATTTGTGAAAAACCCTTAGTTTTAGACCCTAG
CGAAATACAAGAATTGAAAGATTTAGAGGTGAAACACCAAAAAAGGGTGTTTAGTCTTTTACCCTTGCGTTTGCATTGCG
ACACGCTGGCCTTGAAAGAAAAAATTAAGAGTGAATTAGACAAAAACCCTAGCAAGGTGTTTGACATCACGCTCACTTAT
ATCAGCGTTCAAGGGAAATGGTATTTTTCTTCATGGCGAGCGGATGTGAATAGGAGCGGGGGGTTAGCCACTCAAATGGG
GGTGAATATTTTTGACACTTTAATCTATTTGTTTGGAGGCGTTAAAGACAAGGTTATCAATAAAGAAGAGCCTGATTGCG
TAGGGGGGATACTCTTTTTAGAGCATGCCAAAATAAGATGGTTTTTTTCCATCAATCCAGAACACATGGGAGTGGCTAAA
GAAAAGGTTTATCATAAAATGATCCTAGAGGGCGAAGAAGTCAATCTCACGCAGAGCTTTGATAACCTGTATATAGAAAG
CTACAAACAGATTTTAGCTCAAGGGGGGTTTGGTTTAGATGAAGCTATGGCGTCTGTCAAATTGGCTTATGAATTAAGAA
ACCTTCCAGTCAGCGAACCCAATGAAGATTCGCATGTCTTGTGTTGCAAAAACAAAACAGACCAATAA

Upstream 100 bases:

>100_bases
GTGTTGGATCGATCGGTGGAGTGTTTTAATTGCCAATAATATAAGCTTAAATAAGCTAATCTTTGCTAAAATGAGATTCA
AAATGATTTAAGGAAGATGA

Downstream 100 bases:

>100_bases
AGGCACCACTTTTAAAAGCGTTGTTTAGGGGGTTTTGGTTATTGGTATTTGATTAGAATAGGGCTGTTTTTAATTTTCTT
TTAAGAGGGGTTTTTACTTT

Product: putative lipopolysaccharide biosynthesis protein

Products: NA

Alternate protein names: Oxidoreductase Domain Protein; Oxidoreductase; MviM Protein; Lipopolysaccharide Biosynthesis Protein WbpB; Oxidoreductase-Like; Lipopolysaccharide Biosynthesis Protein; Oxidoreductase Gfo/Idh/MocA Family; Uracil-DNA Glycosylase Superfamily Protein; Lipopolysaccaride Biosynthesis Protein WbpB; Gfo/Idh/MocA Family Oxidoreductase; Regulatory Protein LacI; Oxidoreductase Family Protein; Oxidoreductase-Like Protein

Number of amino acids: Translated: 315; Mature: 315

Protein sequence:

>315_residues
MLFAMIGSGGFIAPKHLQAIRDTGHFLDCSFDIHDSVGVLDEYFPQSEFFTNIEDFEKHLEQSKAMGKEINYLSVCTPTH
THFDHIRFGLKYGMHVICEKPLVLDPSEIQELKDLEVKHQKRVFSLLPLRLHCDTLALKEKIKSELDKNPSKVFDITLTY
ISVQGKWYFSSWRADVNRSGGLATQMGVNIFDTLIYLFGGVKDKVINKEEPDCVGGILFLEHAKIRWFFSINPEHMGVAK
EKVYHKMILEGEEVNLTQSFDNLYIESYKQILAQGGFGLDEAMASVKLAYELRNLPVSEPNEDSHVLCCKNKTDQ

Sequences:

>Translated_315_residues
MLFAMIGSGGFIAPKHLQAIRDTGHFLDCSFDIHDSVGVLDEYFPQSEFFTNIEDFEKHLEQSKAMGKEINYLSVCTPTH
THFDHIRFGLKYGMHVICEKPLVLDPSEIQELKDLEVKHQKRVFSLLPLRLHCDTLALKEKIKSELDKNPSKVFDITLTY
ISVQGKWYFSSWRADVNRSGGLATQMGVNIFDTLIYLFGGVKDKVINKEEPDCVGGILFLEHAKIRWFFSINPEHMGVAK
EKVYHKMILEGEEVNLTQSFDNLYIESYKQILAQGGFGLDEAMASVKLAYELRNLPVSEPNEDSHVLCCKNKTDQ
>Mature_315_residues
MLFAMIGSGGFIAPKHLQAIRDTGHFLDCSFDIHDSVGVLDEYFPQSEFFTNIEDFEKHLEQSKAMGKEINYLSVCTPTH
THFDHIRFGLKYGMHVICEKPLVLDPSEIQELKDLEVKHQKRVFSLLPLRLHCDTLALKEKIKSELDKNPSKVFDITLTY
ISVQGKWYFSSWRADVNRSGGLATQMGVNIFDTLIYLFGGVKDKVINKEEPDCVGGILFLEHAKIRWFFSINPEHMGVAK
EKVYHKMILEGEEVNLTQSFDNLYIESYKQILAQGGFGLDEAMASVKLAYELRNLPVSEPNEDSHVLCCKNKTDQ

Specific function: Unknown

COG id: COG0673

COG function: function code R; Predicted dehydrogenases and related proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 1.-.-.- [C]

Molecular weight: Translated: 35973; Mature: 35973

Theoretical pI: Translated: 6.01; Mature: 6.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLFAMIGSGGFIAPKHLQAIRDTGHFLDCSFDIHDSVGVLDEYFPQSEFFTNIEDFEKHL
CEEEEECCCCCCCHHHHHHHHCCCCEEEEEEECCCCHHHHHHHCCCHHHHCCHHHHHHHH
EQSKAMGKEINYLSVCTPTHTHFDHIRFGLKYGMHVICEKPLVLDPSEIQELKDLEVKHQ
HHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHCCCEEECCCCEECHHHHHHHHHHHHHHH
KRVFSLLPLRLHCDTLALKEKIKSELDKNPSKVFDITLTYISVQGKWYFSSWRADVNRSG
HHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEEECEEEEEHHHCCCCCCC
GLATQMGVNIFDTLIYLFGGVKDKVINKEEPDCVGGILFLEHAKIRWFFSINPEHMGVAK
CCHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCHHHHEEEEEECEEEEEEEECHHHHCHHH
EKVYHKMILEGEEVNLTQSFDNLYIESYKQILAQGGFGLDEAMASVKLAYELRNLPVSEP
HHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCC
NEDSHVLCCKNKTDQ
CCCCEEEEECCCCCC
>Mature Secondary Structure
MLFAMIGSGGFIAPKHLQAIRDTGHFLDCSFDIHDSVGVLDEYFPQSEFFTNIEDFEKHL
CEEEEECCCCCCCHHHHHHHHCCCCEEEEEEECCCCHHHHHHHCCCHHHHCCHHHHHHHH
EQSKAMGKEINYLSVCTPTHTHFDHIRFGLKYGMHVICEKPLVLDPSEIQELKDLEVKHQ
HHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHCCCEEECCCCEECHHHHHHHHHHHHHHH
KRVFSLLPLRLHCDTLALKEKIKSELDKNPSKVFDITLTYISVQGKWYFSSWRADVNRSG
HHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEEECEEEEEHHHCCCCCCC
GLATQMGVNIFDTLIYLFGGVKDKVINKEEPDCVGGILFLEHAKIRWFFSINPEHMGVAK
CCHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCHHHHEEEEEECEEEEEEEECHHHHCHHH
EKVYHKMILEGEEVNLTQSFDNLYIESYKQILAQGGFGLDEAMASVKLAYELRNLPVSEP
HHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCC
NEDSHVLCCKNKTDQ
CCCCEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA