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The map label for this gene is 108563070

Identifier: 108563070

GI number: 108563070

Start: 673122

End: 674138

Strand: Direct

Name: 108563070

Synonym: HPAG1_0645

Alternate gene names: NA

Gene position: 673122-674138 (Clockwise)

Preceding gene: 108563069

Following gene: 108563071

Centisome position: 42.17

GC content: 34.51

Gene sequence:

>1017_bases
GTGCAACACTTCAATTTCCTCTATAAAGATTCTTTATTTTCTATCGCTTTATTCACTTTCATTATCGCTCTTGTTATTTT
GTTAGAACAGGCTAGGGCGTATTTCACCCAAAAGAAAAACAAAAAATTTTTACAAAGATTCGCCCAAAATCAAAACGCTT
ATGCGGGCAGTGAGAATTTAGACGAGCTTTTAAAGCATGCTAAAATTTCCAGTTTGATGTTTTTAGCCAGAGCGTATTCT
AAAGCTGACATAGAAATGAGCATTGAAATCTTAAAAGGCCTTTTGAATCGACCCTTAAAAGATGAAGAAAAAATCGCTGT
TTTAGATTTATTGGCTAAAAATTATTTTAGCGTGGGGTATTTGCAAAAAACAAAGGACACCGTGAAAGAAATTTTGCGCT
TTTCCCCAAGGAATGTGGAAGCGTTATTGAAACTTTTGCATGCGTATGAATTAGAAAAAGATTATTCAAAGGCTTTAGAA
ACTTTGGAATGTTTGGAAGAATTAGAAGTGGTTGAAATTGAAACGATTAAAAATTACCTTTATCTCATGCATTTAATAGA
GAATAAGGAAGAGGCGGCTAAAATCCTGCATGTTTCAAAAGCGTCATTAGATTTGAAAAAAATCGCTTTAAATTATTTAA
AATCTTATGATGAAAATCTTTTTTGGCAAGAAATTGATACAACCGAACGGCTAGAAAATGTGATCGATCTTTTATGGGAT
ATGAATATTCCTGCTTTTATTTTAGAAAAACACGCCCTTTTGCAAGACATCGCGCGATCCCAAGGGTTGCTTTTGGACAA
CAAACCTTGCCAAATTTTTGAATTAGAGGTTTTACGCGCTCTATTAAATAGCCCTATAAAAGCGCGTCTGACTTTTGAAT
ACCGCTGCAAGCATTGCAAACAAATCTTTCCTTTTGAAAGCCATAGGTGTCCTGTGTGTTACCAGTTAGCGTTTATGGAT
ATGGTGCTTAAAATCTCTAAAGAAAGCTATGGGAGTGGATTGAATGCAAGAAATTGA

Upstream 100 bases:

>100_bases
AAATTAGTGGAAGAATCTAAAGATAAGATTTTAGAAGAGCATTTTGAAAAATTGCGCGTTAAGTCTAGGATTGTGATGAT
TAGAGAGTGATTTTTAGATT

Downstream 100 bases:

>100_bases
AATTTTTTGCGATGGCTCTTCTTTAGGCAATCCCGGGCCAGGCGGTTATGCGGCGATTTTACGCTATAAAGATAAAGAAA
AAACCATCAGTGGAGGCGAA

Product: hypothetical protein

Products: NA

Alternate protein names: Tetratricopeptide Repeat; TPR Repeat Protein; SpoOJ Regulator; Tetratricopeptide Repeat-Containing Protein; Inner Membrane Protein

Number of amino acids: Translated: 338; Mature: 338

Protein sequence:

>338_residues
MQHFNFLYKDSLFSIALFTFIIALVILLEQARAYFTQKKNKKFLQRFAQNQNAYAGSENLDELLKHAKISSLMFLARAYS
KADIEMSIEILKGLLNRPLKDEEKIAVLDLLAKNYFSVGYLQKTKDTVKEILRFSPRNVEALLKLLHAYELEKDYSKALE
TLECLEELEVVEIETIKNYLYLMHLIENKEEAAKILHVSKASLDLKKIALNYLKSYDENLFWQEIDTTERLENVIDLLWD
MNIPAFILEKHALLQDIARSQGLLLDNKPCQIFELEVLRALLNSPIKARLTFEYRCKHCKQIFPFESHRCPVCYQLAFMD
MVLKISKESYGSGLNARN

Sequences:

>Translated_338_residues
MQHFNFLYKDSLFSIALFTFIIALVILLEQARAYFTQKKNKKFLQRFAQNQNAYAGSENLDELLKHAKISSLMFLARAYS
KADIEMSIEILKGLLNRPLKDEEKIAVLDLLAKNYFSVGYLQKTKDTVKEILRFSPRNVEALLKLLHAYELEKDYSKALE
TLECLEELEVVEIETIKNYLYLMHLIENKEEAAKILHVSKASLDLKKIALNYLKSYDENLFWQEIDTTERLENVIDLLWD
MNIPAFILEKHALLQDIARSQGLLLDNKPCQIFELEVLRALLNSPIKARLTFEYRCKHCKQIFPFESHRCPVCYQLAFMD
MVLKISKESYGSGLNARN
>Mature_338_residues
MQHFNFLYKDSLFSIALFTFIIALVILLEQARAYFTQKKNKKFLQRFAQNQNAYAGSENLDELLKHAKISSLMFLARAYS
KADIEMSIEILKGLLNRPLKDEEKIAVLDLLAKNYFSVGYLQKTKDTVKEILRFSPRNVEALLKLLHAYELEKDYSKALE
TLECLEELEVVEIETIKNYLYLMHLIENKEEAAKILHVSKASLDLKKIALNYLKSYDENLFWQEIDTTERLENVIDLLWD
MNIPAFILEKHALLQDIARSQGLLLDNKPCQIFELEVLRALLNSPIKARLTFEYRCKHCKQIFPFESHRCPVCYQLAFMD
MVLKISKESYGSGLNARN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39451; Mature: 39451

Theoretical pI: Translated: 7.20; Mature: 7.20

Prosite motif: PS50293 TPR_REGION ; PS00327 BACTERIAL_OPSIN_RET

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQHFNFLYKDSLFSIALFTFIIALVILLEQARAYFTQKKNKKFLQRFAQNQNAYAGSENL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCH
DELLKHAKISSLMFLARAYSKADIEMSIEILKGLLNRPLKDEEKIAVLDLLAKNYFSVGY
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH
LQKTKDTVKEILRFSPRNVEALLKLLHAYELEKDYSKALETLECLEELEVVEIETIKNYL
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YLMHLIENKEEAAKILHVSKASLDLKKIALNYLKSYDENLFWQEIDTTERLENVIDLLWD
HHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCHHHHHHHHHHHHHC
MNIPAFILEKHALLQDIARSQGLLLDNKPCQIFELEVLRALLNSPIKARLTFEYRCKHCK
CCCCHHHHHHHHHHHHHHHHCCCEECCCCCHHHHHHHHHHHHCCCCEEEEHHHHHHHHHH
QIFPFESHRCPVCYQLAFMDMVLKISKESYGSGLNARN
HHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MQHFNFLYKDSLFSIALFTFIIALVILLEQARAYFTQKKNKKFLQRFAQNQNAYAGSENL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCH
DELLKHAKISSLMFLARAYSKADIEMSIEILKGLLNRPLKDEEKIAVLDLLAKNYFSVGY
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH
LQKTKDTVKEILRFSPRNVEALLKLLHAYELEKDYSKALETLECLEELEVVEIETIKNYL
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YLMHLIENKEEAAKILHVSKASLDLKKIALNYLKSYDENLFWQEIDTTERLENVIDLLWD
HHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCHHHHHHHHHHHHHC
MNIPAFILEKHALLQDIARSQGLLLDNKPCQIFELEVLRALLNSPIKARLTFEYRCKHCK
CCCCHHHHHHHHHHHHHHHHCCCEECCCCCHHHHHHHHHHHHCCCCEEEEHHHHHHHHHH
QIFPFESHRCPVCYQLAFMDMVLKISKESYGSGLNARN
HHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA