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The map label for this gene is hydE [H]

Identifier: 108563043

GI number: 108563043

Start: 645926

End: 647464

Strand: Direct

Name: hydE [H]

Synonym: HPAG1_0618

Alternate gene names: 108563043

Gene position: 645926-647464 (Clockwise)

Preceding gene: 108563042

Following gene: 108563046

Centisome position: 40.46

GC content: 37.3

Gene sequence:

>1539_bases
TTGGCGTTTGTCTTTCTTTTTAAATGCGTTAATGAAAAAACAAGCCTGAATTTTATGCCCCTTTTAGAGCAAATAGCGTT
CCATTTGCAAGCGCGTTTTTATAGCGTTTATAAGGATAATACCACTTCTTTCTACCTTCAAGCGAGCGCTGAGATCACTT
TAGAATTCGCGCAAAAATTAAGCGAGATCTTACCCTTTTCTTTAGATTTTAGCTTTTTGTCTTTAAAGGAAATCACAGAG
CCTTTAGATGAAAATCTTTTCCAAACAACAAGCCTTTCAAAGCCCCTTTTTATGAACGCTAAAGAGCATCAAGATTTTTT
AGACAAAAATTCATCTTTGTATGCCGATACTCTGGGCTTGATTAAAAACGCCGCTTTTAAGGGGGCTATAATCCATAGCC
CTAAAGAGCTTATAGATTGCTTAACCCAATTAAAAGGCATGCTCAAAACACAGGATTTTATCCCTATTTTCACTTCTAGA
GAGGCGTTATCCCTTTCTTTAAAAAATCCCTCTCCAAGTGCTATTTTTAGCGATCTTTCTAGCGTTTTGAGCTGCACTAA
ATTGCCTTTAGAGGACGCTAAATATTTGGCCAGTTTGGAAAAACCCTCCATCAAAGCCCCATTAAAAAGCGTGTTTAAAG
ATACTTTCAAAAACGATGAAATCATCGCCCAGCTACCCTATGACCCCATATTGGATTTATTGTGCCATATTTTACAAGAT
GAGGGGATAGAATTTGTTTTTATGCATGAAAGCCGTTCTTGTGAAGCGCTGTTACATTATGAAGCGCTTTTTAAAACCCC
TAAACGCTTGATCACACCTGCTAAAAAATTCGTGTTAGAAAACAACCTTTCTACCCTTCCCTTTAAAGATGAATTAGAAT
TTTTAAGCGCAACCCCCAATTCTATCGTTTTGTATTTTAGTTTCAAGCGCCCTACAAGGTTGTTATTGCATGCTAATGGT
TCTTTAAAAACGCTTTTAAGCATTAGTTTTGATTTCAATCAAATATTTAACACTCTCAAACAAGATGAAAAAGCCTCCAG
AATGCTACAAAACTACGCCACTAAATTCCCTAATTTTTACGCGCGCGTTTTAGAGCTTTCTAAATACCAGCTAGGGGGCG
CGAATTTATTGGATTTTTTCCAAATTTTAGGGTTTGTTTTGGGTTATAGCGAGGATTTTTGCACACAAAGCGTTATTCCT
TTGGCTAAAGAGTGCTTACGCCCTAAAGGCCCTAGGATTGATTATAAAATCCTTAAAGGCGATTCTTTGAAAATGGCTTT
AAACTTTTCAAAGATCATGCACAGCGCGATGAGTTTCAGGCTCGCAGGCGTGGAAAATGAAATCTTGAGTTTGGGGATTT
TGGATTCTTTAGCGGAGTTTTTAGGGAATTTCATTTGGGATAACGCGCAGAATTTTAGCGTCCAAGAAGTAACGATCGCT
GGGGATTTCTTTGGCGAAAAAGTGTTTTTGGATTTGTTTGTGCAATATTTCCCCAAAACCCTAACCCTTAAAACGCATGA
ATTTTTGGATTATGAATAA

Upstream 100 bases:

>100_bases
GCCATAGAAACTCGACTCAACGCATGGGGAGTTAAAATGCAACGCACCGATCATATCGCTTTAGAGTGTATCGCTGAACT
CTCTTATAAGGGTTTTTGAA

Downstream 100 bases:

>100_bases
GGGCTTAAAAGCGGATGTGCATCATCAACCCGCCGTCCATGTATTGGGTTTTTTTGCTTTTAGTCCTTTCAAAATAAGGC
CCAAAAGACAAGGTCTTATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 512; Mature: 511

Protein sequence:

>512_residues
MAFVFLFKCVNEKTSLNFMPLLEQIAFHLQARFYSVYKDNTTSFYLQASAEITLEFAQKLSEILPFSLDFSFLSLKEITE
PLDENLFQTTSLSKPLFMNAKEHQDFLDKNSSLYADTLGLIKNAAFKGAIIHSPKELIDCLTQLKGMLKTQDFIPIFTSR
EALSLSLKNPSPSAIFSDLSSVLSCTKLPLEDAKYLASLEKPSIKAPLKSVFKDTFKNDEIIAQLPYDPILDLLCHILQD
EGIEFVFMHESRSCEALLHYEALFKTPKRLITPAKKFVLENNLSTLPFKDELEFLSATPNSIVLYFSFKRPTRLLLHANG
SLKTLLSISFDFNQIFNTLKQDEKASRMLQNYATKFPNFYARVLELSKYQLGGANLLDFFQILGFVLGYSEDFCTQSVIP
LAKECLRPKGPRIDYKILKGDSLKMALNFSKIMHSAMSFRLAGVENEILSLGILDSLAEFLGNFIWDNAQNFSVQEVTIA
GDFFGEKVFLDLFVQYFPKTLTLKTHEFLDYE

Sequences:

>Translated_512_residues
MAFVFLFKCVNEKTSLNFMPLLEQIAFHLQARFYSVYKDNTTSFYLQASAEITLEFAQKLSEILPFSLDFSFLSLKEITE
PLDENLFQTTSLSKPLFMNAKEHQDFLDKNSSLYADTLGLIKNAAFKGAIIHSPKELIDCLTQLKGMLKTQDFIPIFTSR
EALSLSLKNPSPSAIFSDLSSVLSCTKLPLEDAKYLASLEKPSIKAPLKSVFKDTFKNDEIIAQLPYDPILDLLCHILQD
EGIEFVFMHESRSCEALLHYEALFKTPKRLITPAKKFVLENNLSTLPFKDELEFLSATPNSIVLYFSFKRPTRLLLHANG
SLKTLLSISFDFNQIFNTLKQDEKASRMLQNYATKFPNFYARVLELSKYQLGGANLLDFFQILGFVLGYSEDFCTQSVIP
LAKECLRPKGPRIDYKILKGDSLKMALNFSKIMHSAMSFRLAGVENEILSLGILDSLAEFLGNFIWDNAQNFSVQEVTIA
GDFFGEKVFLDLFVQYFPKTLTLKTHEFLDYE
>Mature_511_residues
AFVFLFKCVNEKTSLNFMPLLEQIAFHLQARFYSVYKDNTTSFYLQASAEITLEFAQKLSEILPFSLDFSFLSLKEITEP
LDENLFQTTSLSKPLFMNAKEHQDFLDKNSSLYADTLGLIKNAAFKGAIIHSPKELIDCLTQLKGMLKTQDFIPIFTSRE
ALSLSLKNPSPSAIFSDLSSVLSCTKLPLEDAKYLASLEKPSIKAPLKSVFKDTFKNDEIIAQLPYDPILDLLCHILQDE
GIEFVFMHESRSCEALLHYEALFKTPKRLITPAKKFVLENNLSTLPFKDELEFLSATPNSIVLYFSFKRPTRLLLHANGS
LKTLLSISFDFNQIFNTLKQDEKASRMLQNYATKFPNFYARVLELSKYQLGGANLLDFFQILGFVLGYSEDFCTQSVIPL
AKECLRPKGPRIDYKILKGDSLKMALNFSKIMHSAMSFRLAGVENEILSLGILDSLAEFLGNFIWDNAQNFSVQEVTIAG
DFFGEKVFLDLFVQYFPKTLTLKTHEFLDYE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 58327; Mature: 58196

Theoretical pI: Translated: 5.89; Mature: 5.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAFVFLFKCVNEKTSLNFMPLLEQIAFHLQARFYSVYKDNTTSFYLQASAEITLEFAQKL
CHHEEEEHHHCCCCCCHHHHHHHHHHHHHHHHHHHHEECCCEEEEEEECCHHHHHHHHHH
SEILPFSLDFSFLSLKEITEPLDENLFQTTSLSKPLFMNAKEHQDFLDKNSSLYADTLGL
HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCHHHHHHHH
IKNAAFKGAIIHSPKELIDCLTQLKGMLKTQDFIPIFTSREALSLSLKNPSPSAIFSDLS
HHHHHHCCCEECCHHHHHHHHHHHHHHHHCCCCCEEEECCCEEEEEECCCCCHHHHHHHH
SVLSCTKLPLEDAKYLASLEKPSIKAPLKSVFKDTFKNDEIIAQLPYDPILDLLCHILQD
HHHHHHCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHC
EGIEFVFMHESRSCEALLHYEALFKTPKRLITPAKKFVLENNLSTLPFKDELEFLSATPN
CCCEEEEEECCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCC
SIVLYFSFKRPTRLLLHANGSLKTLLSISFDFNQIFNTLKQDEKASRMLQNYATKFPNFY
CEEEEEEECCCEEEEEECCCCEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCHHHH
ARVLELSKYQLGGANLLDFFQILGFVLGYSEDFCTQSVIPLAKECLRPKGPRIDYKILKG
HHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEECC
DSLKMALNFSKIMHSAMSFRLAGVENEILSLGILDSLAEFLGNFIWDNAQNFSVQEVTIA
CCEEEEECHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEE
GDFFGEKVFLDLFVQYFPKTLTLKTHEFLDYE
CHHHHHHHHHHHHHHHCCCCEEEEHHHCCCCC
>Mature Secondary Structure 
AFVFLFKCVNEKTSLNFMPLLEQIAFHLQARFYSVYKDNTTSFYLQASAEITLEFAQKL
HHEEEEHHHCCCCCCHHHHHHHHHHHHHHHHHHHHEECCCEEEEEEECCHHHHHHHHHH
SEILPFSLDFSFLSLKEITEPLDENLFQTTSLSKPLFMNAKEHQDFLDKNSSLYADTLGL
HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCHHHHHHHH
IKNAAFKGAIIHSPKELIDCLTQLKGMLKTQDFIPIFTSREALSLSLKNPSPSAIFSDLS
HHHHHHCCCEECCHHHHHHHHHHHHHHHHCCCCCEEEECCCEEEEEECCCCCHHHHHHHH
SVLSCTKLPLEDAKYLASLEKPSIKAPLKSVFKDTFKNDEIIAQLPYDPILDLLCHILQD
HHHHHHCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHC
EGIEFVFMHESRSCEALLHYEALFKTPKRLITPAKKFVLENNLSTLPFKDELEFLSATPN
CCCEEEEEECCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCC
SIVLYFSFKRPTRLLLHANGSLKTLLSISFDFNQIFNTLKQDEKASRMLQNYATKFPNFY
CEEEEEEECCCEEEEEECCCCEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCHHHH
ARVLELSKYQLGGANLLDFFQILGFVLGYSEDFCTQSVIPLAKECLRPKGPRIDYKILKG
HHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEECC
DSLKMALNFSKIMHSAMSFRLAGVENEILSLGILDSLAEFLGNFIWDNAQNFSVQEVTIA
CCEEEEECHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEE
GDFFGEKVFLDLFVQYFPKTLTLKTHEFLDYE
CHHHHHHHHHHHHHHHCCCCEEEEHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9639603; 14500908; 1587288 [H]