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The map label for this gene is 108563012

Identifier: 108563012

GI number: 108563012

Start: 605422

End: 606126

Strand: Direct

Name: 108563012

Synonym: HPAG1_0587

Alternate gene names: NA

Gene position: 605422-606126 (Clockwise)

Preceding gene: 108563011

Following gene: 108563013

Centisome position: 37.93

GC content: 39.86

Gene sequence:

>705_bases
ATGATGCGAAAAATTTTAATAGGACTTTTTTTGAGTTTTTTGAGCATGGAAGCTGGCGAAAAAGTGTATGCGATTTTTAA
TGTGAAAGCGATGCAAGATTCCAAACTCACCTTAGACAGCACAGGGATTGTGGATAGCATTAAGGTTACTGAGGGGAGCG
TGGTCAAAAAGGGCGATGTTTTGTTGCTTTTGTATAATCAAGACAAACAGGCTCAAAGCGATTCTACTGAGCAACAACTC
ATTTTCGCTAAAAAGCAATACCAACGATACAGCAAAATTGGGGGGGCTGTGGATAAAAACACTCTAGAGAGTTATGAGTT
CAATTACAGGCGTTTGGAGTCTGATTACGCTTATTCTATTGCAGTATTGAATAAAACCATTTTGAGAGCCCCTTTTGATG
GCGTAATAGCGAGTAAAAACATTCAAGTGGGCGAAGGGGTGAGCGCGAATAACACGGTGTTATTGAGACTAGTCAGCCAT
GCTAGGAAATTGGTTATTGAATTTGATTCTAAATATATTAATGCAGTCAAAGTGGGGGATACTTACACTTATTCTATAGA
CGGGGATTCTAATCAGCATGAAGCTAAAATCACTAAGATTTACCCCACGGTTGATGAAAACACCAGAAAAGTGAGCGCTG
AAGCCCTTTTGTCTAAGCCTATGGCAGTGGGGCTTTTTGGCGATGGGTTTATCCAAACAAAATAA

Upstream 100 bases:

>100_bases
GCTTACAATTTAGCGCTCAACAATTATGAAGTGCAAAAAGCCAATTACATTTTTAACAGCGGGCATAAAATAGATGACTA
TGTGCATTAAGGGAATAAAA

Downstream 100 bases:

>100_bases
TAGGATATTTTGATGTATAAAACAGCGATTAATCGTCCTATTACGACCTTGATGTTTGCTTTGGCGATTGTCTTTTTTGG
GACTATGGGTTTTAAAAAAT

Product: membrane fusion protein of the hefABC efflux system HefB

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 234; Mature: 234

Protein sequence:

>234_residues
MMRKILIGLFLSFLSMEAGEKVYAIFNVKAMQDSKLTLDSTGIVDSIKVTEGSVVKKGDVLLLLYNQDKQAQSDSTEQQL
IFAKKQYQRYSKIGGAVDKNTLESYEFNYRRLESDYAYSIAVLNKTILRAPFDGVIASKNIQVGEGVSANNTVLLRLVSH
ARKLVIEFDSKYINAVKVGDTYTYSIDGDSNQHEAKITKIYPTVDENTRKVSAEALLSKPMAVGLFGDGFIQTK

Sequences:

>Translated_234_residues
MMRKILIGLFLSFLSMEAGEKVYAIFNVKAMQDSKLTLDSTGIVDSIKVTEGSVVKKGDVLLLLYNQDKQAQSDSTEQQL
IFAKKQYQRYSKIGGAVDKNTLESYEFNYRRLESDYAYSIAVLNKTILRAPFDGVIASKNIQVGEGVSANNTVLLRLVSH
ARKLVIEFDSKYINAVKVGDTYTYSIDGDSNQHEAKITKIYPTVDENTRKVSAEALLSKPMAVGLFGDGFIQTK
>Mature_234_residues
MMRKILIGLFLSFLSMEAGEKVYAIFNVKAMQDSKLTLDSTGIVDSIKVTEGSVVKKGDVLLLLYNQDKQAQSDSTEQQL
IFAKKQYQRYSKIGGAVDKNTLESYEFNYRRLESDYAYSIAVLNKTILRAPFDGVIASKNIQVGEGVSANNTVLLRLVSH
ARKLVIEFDSKYINAVKVGDTYTYSIDGDSNQHEAKITKIYPTVDENTRKVSAEALLSKPMAVGLFGDGFIQTK

Specific function: Unknown

COG id: COG0845

COG function: function code M; Membrane-fusion protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26048; Mature: 26048

Theoretical pI: Translated: 9.27; Mature: 9.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMRKILIGLFLSFLSMEAGEKVYAIFNVKAMQDSKLTLDSTGIVDSIKVTEGSVVKKGDV
CHHHHHHHHHHHHHHHCCCCEEEEEEEEEEECCCCEEEECCCCEEEEEECCCCEEECCCE
LLLLYNQDKQAQSDSTEQQLIFAKKQYQRYSKIGGAVDKNTLESYEFNYRRLESDYAYSI
EEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCHHEEECCCCEEEE
AVLNKTILRAPFDGVIASKNIQVGEGVSANNTVLLRLVSHARKLVIEFDSKYINAVKVGD
EEHHHHHHHCCCCCEEECCCEECCCCCCCCCHHHHHHHHHHHHEEEEECCCEEEEEEECC
TYTYSIDGDSNQHEAKITKIYPTVDENTRKVSAEALLSKPMAVGLFGDGFIQTK
EEEEEECCCCCCCCEEEEEEECCCCCCCHHHHHHHHHCCCEEEEEECCCEEECC
>Mature Secondary Structure
MMRKILIGLFLSFLSMEAGEKVYAIFNVKAMQDSKLTLDSTGIVDSIKVTEGSVVKKGDV
CHHHHHHHHHHHHHHHCCCCEEEEEEEEEEECCCCEEEECCCCEEEEEECCCCEEECCCE
LLLLYNQDKQAQSDSTEQQLIFAKKQYQRYSKIGGAVDKNTLESYEFNYRRLESDYAYSI
EEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCHHEEECCCCEEEE
AVLNKTILRAPFDGVIASKNIQVGEGVSANNTVLLRLVSHARKLVIEFDSKYINAVKVGD
EEHHHHHHHCCCCCEEECCCEECCCCCCCCCHHHHHHHHHHHHEEEEECCCEEEEEEECC
TYTYSIDGDSNQHEAKITKIYPTVDENTRKVSAEALLSKPMAVGLFGDGFIQTK
EEEEEECCCCCCCCEEEEEEECCCCCCCHHHHHHHHHCCCEEEEEECCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA