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The map label for this gene is 108563011

Identifier: 108563011

GI number: 108563011

Start: 603978

End: 605411

Strand: Direct

Name: 108563011

Synonym: HPAG1_0586

Alternate gene names: NA

Gene position: 603978-605411 (Clockwise)

Preceding gene: 108563010

Following gene: 108563012

Centisome position: 37.83

GC content: 39.26

Gene sequence:

>1434_bases
ATGAAAACGATTATAAGATATGCTAGTTTATGGGGCTTGTGTGCAGCTTTAACTCTAGCCCAAAGCCCCTCTAAAACCCC
AGATGAAATCAAGCAAATCCTTAACAATTATAGCCACAAGAATTTAAAGCTCATTGATCCGCCGACAAGTTCTTTAGAAG
CAACACCGAGTTTTTTATTCTCGCCTAAAGAAACAGCGACCACGATCAATCAAGAGATCGCTAAATACCATGAAAAAAGC
GATAAAGCCGCTTTGGGGCTTTATGAATTGCTAAAGGGGGCTACCACTAATCTCAGTTTGCAAGCGCAAGAACTCAGTGT
CAAGCAAGCGATGAAGAACCATACCATCGCCAAAGCGATGTTTTTGCCTACTTTGAACGCGAGTTATAATTTTAAAAATG
AAGCTAGGGATACTCCAGAATATAAGCATTATAACACCCAACAACTCCAAGCTCAAGTCACATTGAATGTGTTTAATGGC
TTTAGCAATGTGAATAATGTCAAAGAAAAGTCTGCGACTTACCGATCCACTGTGGCTAATTTAGAATATAGCCGCCAAAG
CGTGTATTTGCAAGTGGTGCAACAATACTACGAGTATTTTAACAATCTCGCTCGCATGATCGCTTTGCAAAAGAAATTAG
AGCAAATCAAAACGGACATTAAAAGGGTTACCAAGCTCTATGATAAAGGGCTGACTACGATTGATGATTTGCAAAGCCTA
AAAGCGCAAGGGAATTTGAGCGAATACGATATTTTGGACATGCAATTTGCTTTGGAGCAAAACCGCTTGACTTTAGAATA
CCTCACTAACCTCAGTGTGAAAAATTTGAAAAAGACTACGATTGATGCGCCTAATTTGCAATTGAGAGAAAGGCAAGATT
TAGTCTCTTTAAGGGAGCAGATTTCTGCACTCAGATACCAAAACAAGCAACTCAATTATTACCCCAAGATAGATGTGTTT
GACTCATGGCTTTTTTGGATCCAAAAACCCGCTTATGCCACAGGGCGTTTTGGAAACTTCTACCCCGGTCAGCAAAACAC
GGCTGGGGTTACTGCGACTTTGAATATTTTTGATGATATAGGGTTGAGTTTGCAAAAACAATCCATCATGCTAGGCCAAT
TAGCGAATGAAAAGAATTTAGCGTATAAAAAGCTAGAGCAAGAAAAAGACGAACAGCTTTACAGAAAGTCACTTGATATT
GCTAGAGCCAAGATTGAATCTTCAAAGGCCAGTTTGGATGCGGCTAATCTTTCTTTTGCCAATATTAAAAGGAAATACGA
CGCTAATTTAGTGGATTTCACCACCTATTTAAGGGGCTTAACCACGCGTTTTGATGCAGAAGTGGCTTACAATTTAGCGC
TCAACAATTATGAAGTGCAAAAAGCCAATTACATTTTTAACAGCGGGCATAAAATAGATGACTATGTGCATTAA

Upstream 100 bases:

>100_bases
TTTTAATTTAGGGCATGGGATGTTGCCGGATCTGCCTAGAGAAAACGCAAAATATTTAGTGCAATTAGTGCATGCTAAAA
CCAGGCGATAGGGGGGATTG

Downstream 100 bases:

>100_bases
GGGAATAAAAATGATGCGAAAAATTTTAATAGGACTTTTTTTGAGTTTTTTGAGCATGGAAGCTGGCGAAAAAGTGTATG
CGATTTTTAATGTGAAAGCG

Product: hypothetical protein

Products: NA

Alternate protein names: Outer Membrane Component Of Efflux System; Outer-Membrane Protein Of HefABC Efflux System HefA

Number of amino acids: Translated: 477; Mature: 477

Protein sequence:

>477_residues
MKTIIRYASLWGLCAALTLAQSPSKTPDEIKQILNNYSHKNLKLIDPPTSSLEATPSFLFSPKETATTINQEIAKYHEKS
DKAALGLYELLKGATTNLSLQAQELSVKQAMKNHTIAKAMFLPTLNASYNFKNEARDTPEYKHYNTQQLQAQVTLNVFNG
FSNVNNVKEKSATYRSTVANLEYSRQSVYLQVVQQYYEYFNNLARMIALQKKLEQIKTDIKRVTKLYDKGLTTIDDLQSL
KAQGNLSEYDILDMQFALEQNRLTLEYLTNLSVKNLKKTTIDAPNLQLRERQDLVSLREQISALRYQNKQLNYYPKIDVF
DSWLFWIQKPAYATGRFGNFYPGQQNTAGVTATLNIFDDIGLSLQKQSIMLGQLANEKNLAYKKLEQEKDEQLYRKSLDI
ARAKIESSKASLDAANLSFANIKRKYDANLVDFTTYLRGLTTRFDAEVAYNLALNNYEVQKANYIFNSGHKIDDYVH

Sequences:

>Translated_477_residues
MKTIIRYASLWGLCAALTLAQSPSKTPDEIKQILNNYSHKNLKLIDPPTSSLEATPSFLFSPKETATTINQEIAKYHEKS
DKAALGLYELLKGATTNLSLQAQELSVKQAMKNHTIAKAMFLPTLNASYNFKNEARDTPEYKHYNTQQLQAQVTLNVFNG
FSNVNNVKEKSATYRSTVANLEYSRQSVYLQVVQQYYEYFNNLARMIALQKKLEQIKTDIKRVTKLYDKGLTTIDDLQSL
KAQGNLSEYDILDMQFALEQNRLTLEYLTNLSVKNLKKTTIDAPNLQLRERQDLVSLREQISALRYQNKQLNYYPKIDVF
DSWLFWIQKPAYATGRFGNFYPGQQNTAGVTATLNIFDDIGLSLQKQSIMLGQLANEKNLAYKKLEQEKDEQLYRKSLDI
ARAKIESSKASLDAANLSFANIKRKYDANLVDFTTYLRGLTTRFDAEVAYNLALNNYEVQKANYIFNSGHKIDDYVH
>Mature_477_residues
MKTIIRYASLWGLCAALTLAQSPSKTPDEIKQILNNYSHKNLKLIDPPTSSLEATPSFLFSPKETATTINQEIAKYHEKS
DKAALGLYELLKGATTNLSLQAQELSVKQAMKNHTIAKAMFLPTLNASYNFKNEARDTPEYKHYNTQQLQAQVTLNVFNG
FSNVNNVKEKSATYRSTVANLEYSRQSVYLQVVQQYYEYFNNLARMIALQKKLEQIKTDIKRVTKLYDKGLTTIDDLQSL
KAQGNLSEYDILDMQFALEQNRLTLEYLTNLSVKNLKKTTIDAPNLQLRERQDLVSLREQISALRYQNKQLNYYPKIDVF
DSWLFWIQKPAYATGRFGNFYPGQQNTAGVTATLNIFDDIGLSLQKQSIMLGQLANEKNLAYKKLEQEKDEQLYRKSLDI
ARAKIESSKASLDAANLSFANIKRKYDANLVDFTTYLRGLTTRFDAEVAYNLALNNYEVQKANYIFNSGHKIDDYVH

Specific function: Unknown

COG id: COG1538

COG function: function code MU; Outer membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 54634; Mature: 54634

Theoretical pI: Translated: 9.52; Mature: 9.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTIIRYASLWGLCAALTLAQSPSKTPDEIKQILNNYSHKNLKLIDPPTSSLEATPSFLF
CCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCEEEECCCCCCCCCCCHHHC
SPKETATTINQEIAKYHEKSDKAALGLYELLKGATTNLSLQAQELSVKQAMKNHTIAKAM
CCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHH
FLPTLNASYNFKNEARDTPEYKHYNTQQLQAQVTLNVFNGFSNVNNVKEKSATYRSTVAN
HHCCCCCCCCCCCCCCCCCCCCCCCHHHHEEEEEEEHHHCHHHHHHHHHHHHHHHHHHHH
LEYSRQSVYLQVVQQYYEYFNNLARMIALQKKLEQIKTDIKRVTKLYDKGLTTIDDLQSL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
KAQGNLSEYDILDMQFALEQNRLTLEYLTNLSVKNLKKTTIDAPNLQLRERQDLVSLREQ
HHCCCCCCCHHHHHHHHHHCCCEEHHHHHCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHH
ISALRYQNKQLNYYPKIDVFDSWLFWIQKPAYATGRFGNFYPGQQNTAGVTATLNIFDDI
HHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEEHHHC
GLSLQKQSIMLGQLANEKNLAYKKLEQEKDEQLYRKSLDIARAKIESSKASLDAANLSFA
CCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHH
NIKRKYDANLVDFTTYLRGLTTRFDAEVAYNLALNNYEVQKANYIFNSGHKIDDYVH
HHHHHHCCCHHHHHHHHHHHHHHHCCCEEEEEEECCEEEEHHHEEECCCCCCCCCCC
>Mature Secondary Structure
MKTIIRYASLWGLCAALTLAQSPSKTPDEIKQILNNYSHKNLKLIDPPTSSLEATPSFLF
CCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCEEEECCCCCCCCCCCHHHC
SPKETATTINQEIAKYHEKSDKAALGLYELLKGATTNLSLQAQELSVKQAMKNHTIAKAM
CCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHH
FLPTLNASYNFKNEARDTPEYKHYNTQQLQAQVTLNVFNGFSNVNNVKEKSATYRSTVAN
HHCCCCCCCCCCCCCCCCCCCCCCCHHHHEEEEEEEHHHCHHHHHHHHHHHHHHHHHHHH
LEYSRQSVYLQVVQQYYEYFNNLARMIALQKKLEQIKTDIKRVTKLYDKGLTTIDDLQSL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
KAQGNLSEYDILDMQFALEQNRLTLEYLTNLSVKNLKKTTIDAPNLQLRERQDLVSLREQ
HHCCCCCCCHHHHHHHHHHCCCEEHHHHHCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHH
ISALRYQNKQLNYYPKIDVFDSWLFWIQKPAYATGRFGNFYPGQQNTAGVTATLNIFDDI
HHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEEHHHC
GLSLQKQSIMLGQLANEKNLAYKKLEQEKDEQLYRKSLDIARAKIESSKASLDAANLSFA
CCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHH
NIKRKYDANLVDFTTYLRGLTTRFDAEVAYNLALNNYEVQKANYIFNSGHKIDDYVH
HHHHHHCCCHHHHHHHHHHHHHHHCCCEEEEEEECCEEEEHHHEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA