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The map label for this gene is cagS [H]

Identifier: 108562935

GI number: 108562935

Start: 532270

End: 532869

Strand: Reverse

Name: cagS [H]

Synonym: HPAG1_0510

Alternate gene names: 108562935

Gene position: 532869-532270 (Counterclockwise)

Preceding gene: 108562936

Following gene: 108562931

Centisome position: 33.38

GC content: 32.5

Gene sequence:

>600_bases
ATGAGTAATAACATGCGAAAACTCTTCTCAATGATTGCCAACTCAAAAGATAAGAAAGAAAAACTTATTGAGAGTTTGCA
GGAGAACGAACTTTTAAACACTGATGAAAAAAAGAAAATCATAGATCAAATAAAAACCATGCATGATTTTTTCAAACAGA
TGCATACGAACAAGGGAGCGTTAGATAAGGTTCTAAGAAATTACATGAAAGATTATCGTGCTGTTATCAAAAGCATTGGT
GTTGATAAGTTTAAAAAGGTTTATCAATTGCTTGAGAGTGAAACTATGGAGCTGTTGCATGCGATTGCAAAGAATCCTAA
TTTCTTATTCTCTAAATTTGATCGATCAATTCTTGGAATATTTCTGCCTTTCTTCAGTAAGCCCATCATGTTCAAGATGA
GTATTAGAGAAATGGACTCGCAAATAGAATTGTATGGCACTAAGCTCCCACTATTGAAATTGTTTGTGATGACAGATGAA
GAAGTGAATTTCTATGCTAATCTAAAAACCATTGAACAATATAACGACTATGTTAGGGATTTGCTGATGAAATTTGATCT
TGAAAAATACATGAAAGAAAAAGGAGTGCAAAATGCTTGA

Upstream 100 bases:

>100_bases
GAAATTTTCACACAACAGATACTGTATAATTTTAATATAAAACTTTACGATTTAAACAATCTAAAGAGAAACAAAATCCA
TTGAAGGGATCAAGAGCGAT

Downstream 100 bases:

>100_bases
TGTGGAAAACAAACAAAAAATCTCGGTGCAACTAACAAAATTCAGTTTGAAAAATATTTGTCTCAAGCAGAGACAAAATT
AAAAAATGATGAGTGCTTTA

Product: cag pathogenicity island protein S

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 199; Mature: 198

Protein sequence:

>199_residues
MSNNMRKLFSMIANSKDKKEKLIESLQENELLNTDEKKKIIDQIKTMHDFFKQMHTNKGALDKVLRNYMKDYRAVIKSIG
VDKFKKVYQLLESETMELLHAIAKNPNFLFSKFDRSILGIFLPFFSKPIMFKMSIREMDSQIELYGTKLPLLKLFVMTDE
EVNFYANLKTIEQYNDYVRDLLMKFDLEKYMKEKGVQNA

Sequences:

>Translated_199_residues
MSNNMRKLFSMIANSKDKKEKLIESLQENELLNTDEKKKIIDQIKTMHDFFKQMHTNKGALDKVLRNYMKDYRAVIKSIG
VDKFKKVYQLLESETMELLHAIAKNPNFLFSKFDRSILGIFLPFFSKPIMFKMSIREMDSQIELYGTKLPLLKLFVMTDE
EVNFYANLKTIEQYNDYVRDLLMKFDLEKYMKEKGVQNA
>Mature_198_residues
SNNMRKLFSMIANSKDKKEKLIESLQENELLNTDEKKKIIDQIKTMHDFFKQMHTNKGALDKVLRNYMKDYRAVIKSIGV
DKFKKVYQLLESETMELLHAIAKNPNFLFSKFDRSILGIFLPFFSKPIMFKMSIREMDSQIELYGTKLPLLKLFVMTDEE
VNFYANLKTIEQYNDYVRDLLMKFDLEKYMKEKGVQNA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23657; Mature: 23526

Theoretical pI: Translated: 9.78; Mature: 9.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
6.5 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
6.1 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNNMRKLFSMIANSKDKKEKLIESLQENELLNTDEKKKIIDQIKTMHDFFKQMHTNKGA
CCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCH
LDKVLRNYMKDYRAVIKSIGVDKFKKVYQLLESETMELLHAIAKNPNFLFSKFDRSILGI
HHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
FLPFFSKPIMFKMSIREMDSQIELYGTKLPLLKLFVMTDEEVNFYANLKTIEQYNDYVRD
HHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
LLMKFDLEKYMKEKGVQNA
HHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
SNNMRKLFSMIANSKDKKEKLIESLQENELLNTDEKKKIIDQIKTMHDFFKQMHTNKGA
CCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCH
LDKVLRNYMKDYRAVIKSIGVDKFKKVYQLLESETMELLHAIAKNPNFLFSKFDRSILGI
HHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
FLPFFSKPIMFKMSIREMDSQIELYGTKLPLLKLFVMTDEEVNFYANLKTIEQYNDYVRD
HHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
LLMKFDLEKYMKEKGVQNA
HHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9923682 [H]